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Genes associated with body weight gain and feed intake identified by meta-analysis of the mesenteric fat from crossbred beef steers

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-1-4614-0965-6_8openalex-snapshot
The Evolution of Mammalian Adipose Tissue
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Interactions of Adipose and Lymphoid Tissues
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Adipose Tissue Biology
inferredcites →https://doi.org/10.1016/j.archoralbio.2017.07.021openalex-snapshot
Extracellular HSP72 induces proinflammatory cytokines in human periodontal ligament fibroblast cells through the TLR4/NFκB pathway in vitro
inferredcites →https://doi.org/10.1016/j.bbagrm.2008.05.001openalex-snapshot
Transcriptional regulation of ketone body-utilizing enzyme, acetoacetyl-CoA synthetase, by C/EBPα during adipocyte differentiation
inferredcites →https://doi.org/10.1016/j.gene.2016.03.034openalex-snapshot
Transcriptome differences in the rumen of beef steers with variation in feed intake and gain
inferredcites →https://doi.org/10.1016/j.immuni.2015.11.003openalex-snapshot
Integrated, Multi-cohort Analysis Identifies Conserved Transcriptional Signatures across Multiple Respiratory Viruses
inferredcites →https://doi.org/10.1016/j.jid.2017.08.015openalex-snapshot
Lack of Galanin Receptor 3 Alleviates Psoriasis by Altering Vascularization, Immune Cell Infiltration, and Cytokine Expression
inferredcites →https://doi.org/10.1016/j.jprot.2013.01.017openalex-snapshot
Selection for residual feed intake alters the mitochondria protein profile in pigs
inferredcites →https://doi.org/10.1016/j.tiv.2014.01.009openalex-snapshot
Oxidative stress resulting from exposure of a human salivary gland cells to paraoxon: An in vitro model for organophosphate oral exposure
inferredcites →https://doi.org/10.1016/s0739-7240(98)00031-9openalex-snapshot
Immune and endocrine regulation of food intake in sick animals
inferredcites →https://doi.org/10.1016/s2213-2600(16)00048-5openalex-snapshot
Genome-wide expression for diagnosis of pulmonary tuberculosis: a multicohort analysis
inferredcites →https://doi.org/10.1017/s1751731111001091openalex-snapshot
Differential mesenteric fat deposition in bovines fed on silage or concentrate is independent of glycerol membrane permeability
inferredcites →https://doi.org/10.1038/nbt.3122openalex-snapshot
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
inferredcites →https://doi.org/10.1038/ng1225openalex-snapshot
Cidea-deficient mice have lean phenotype and are resistant to obesity
inferredcites →https://doi.org/10.1038/nmeth.3317openalex-snapshot
HISAT: a fast spliced aligner with low memory requirements
inferredcites →https://doi.org/10.1038/nprot.2008.211openalex-snapshot
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
inferredcites →https://doi.org/10.1038/s41598-017-19072-5openalex-snapshot
Integrative approach using liver and duodenum RNA-Seq data identifies candidate genes and pathways associated with feed efficiency in pigs
inferredcites →https://doi.org/10.1038/s41598-018-25605-3openalex-snapshot
Transcriptome analyses reveal reduced hepatic lipid synthesis and accumulation in more feed efficient beef cattle
inferredcites →https://doi.org/10.1038/srep39493openalex-snapshot
Gene expression differences in Longissimus muscle of Nelore steers genetically divergent for residual feed intake
inferredcites →https://doi.org/10.1071/ea02221openalex-snapshot
Biological basis for variation in residual feed intake in beef cattle. 2. Synthesis of results following divergent selection
inferredcites →https://doi.org/10.1073/pnas.0611167104openalex-snapshot
Death-effector domain-containing protein DEDD is an inhibitor of mitotic Cdk1/cyclin B1
inferredcites →https://doi.org/10.1073/pnas.1133426100openalex-snapshot
Insig-1 “brakes” lipogenesis in adipocytes and inhibits differentiation of preadipocytes
inferredcites →https://doi.org/10.1073/pnas.1809046116openalex-snapshot
Nutrition, the visceral immune system, and the evolutionary origins of pathogenic obesity
inferredcites →https://doi.org/10.1074/jbc.m114.635144openalex-snapshot
Human CHAC1 Protein Degrades Glutathione, and mRNA Induction Is Regulated by the Transcription Factors ATF4 and ATF3 and a Bipartite ATF/CRE Regulatory Element
inferredcites →https://doi.org/10.1093/bioinformatics/btu170openalex-snapshot
Trimmomatic: a flexible trimmer for Illumina sequence data
inferredcites →https://doi.org/10.1093/biomet/61.1.1openalex-snapshot
The Jackknife--A Review
inferredcites →https://doi.org/10.1093/emph/eow034openalex-snapshot
Energetics and the immune system: Trade-offs associated with non-acute levels of CRP in adolescent Gambian girls.
inferredcites →https://doi.org/10.1093/nar/gkn923openalex-snapshot
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
inferredcites →https://doi.org/10.1093/nar/gkv1194openalex-snapshot
PANTHER version 10: expanded protein families and functions, and analysis tools
inferredcites →https://doi.org/10.1111/age.12440openalex-snapshot
Differential gene expression in the duodenum, jejunum and ileum among crossbred beef steers with divergent gain and feed intake phenotypes
inferredcites →https://doi.org/10.1111/age.12565openalex-snapshot
Relationships between the genes expressed in the mesenteric adipose tissue of beef cattle and feed intake and gain
inferredcites →https://doi.org/10.1111/j.1365-2052.2011.02182.xopenalex-snapshot
Global gene expression profiling reveals genes expressed differentially in cattle with high and low residual feed intake
inferredcites →https://doi.org/10.1111/j.2517-6161.1995.tb02031.xopenalex-snapshot
Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
inferredcites →https://doi.org/10.1152/ajpendo.00078.2012openalex-snapshot
Abdominal fat analyzed by DEXA scan reflects visceral body fat and improves the phenotype description and the assessment of metabolic risk in mice
inferredcites →https://doi.org/10.1152/physiolgenomics.00190.2010openalex-snapshot
Adipose tissue transcriptome changes during obesity development in female dogs
inferredcites →https://doi.org/10.1186/1471-2164-10-142openalex-snapshot
Adipogenic and energy metabolism gene networks in longissimus lumborum during rapid post-weaning growth in Angus and Angus × Simmental cattle fed high-starch or low-starch diets
inferredcites →https://doi.org/10.1186/gb-2014-15-6-r76openalex-snapshot
Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition
inferredcites →https://doi.org/10.1186/s12864-017-3639-0openalex-snapshot
A transcriptome multi-tissue analysis identifies biological pathways and genes associated with variations in feed efficiency of growing pigs
inferredcites →https://doi.org/10.1186/s12864-018-4769-8openalex-snapshot
RNA-Seq Meta-analysis identifies genes in skeletal muscle associated with gain and intake across a multi-season study of crossbred beef steers
inferredcites →https://doi.org/10.1186/s12864-019-5906-8openalex-snapshot
The effect of breed and diet type on the global transcriptome of hepatic tissue in beef cattle divergent for feed efficiency
inferredcites →https://doi.org/10.1186/s12918-017-0396-2openalex-snapshot
Progesterone signalling in broiler skeletal muscle is associated with divergent feed efficiency
inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
inferredcites →https://doi.org/10.1186/s40478-014-0093-yopenalex-snapshot
Integrated multi-cohort transcriptional meta-analysis of neurodegenerative diseases
inferredcites →https://doi.org/10.1210/jc.2004-0395openalex-snapshot
Adipose Tissue as an Endocrine Organ
inferredcites →https://doi.org/10.1242/dev.036061openalex-snapshot
H19 acts as a trans regulator of the imprinted gene network controlling growth in mice
inferredcites →https://doi.org/10.1371/journal.pone.0135810openalex-snapshot
RNA-Seq Analysis of Abdominal Fat Reveals Differences between Modern Commercial Broiler Chickens with High and Low Feed Efficiencies
inferredcites →https://doi.org/10.2307/2278451openalex-snapshot
Statistical Methods for Research Workers.
inferredcites →https://doi.org/10.2307/2299007openalex-snapshot
Statistical Methods for Research Workers.
inferredcites →https://doi.org/10.2527/jas.2012-6170openalex-snapshot
Candidate genes and single nucleotide polymorphisms associated with variation in residual feed intake in beef cattle1
inferredcites →https://doi.org/10.2527/jas.2014-8493openalex-snapshot
Estimation of breed-specific heterosis effects for birth, weaning, and yearling weight in cattle1
inferredcites →https://doi.org/10.3382/ps.2011-01435openalex-snapshot
Gene expression in breast muscle associated with feed efficiency in a single male broiler line using a chicken 44K oligo microarray. I. Top differentially expressed genes
inferredcites →https://doi.org/10.3382/ps.2012-02204openalex-snapshot
Gene expression in breast muscle associated with feed efficiency in a single male broiler line using a chicken 44K microarray. II. Differentially expressed focus genes
inferredcites →https://doi.org/10.3389/fgene.2016.00127openalex-snapshot
Profile of the Spleen Transcriptome in Beef Steers with Variation in Gain and Feed Intake
inferredcites →https://doi.org/10.3389/fimmu.2016.00075openalex-snapshot
Unfolding the Role of Large Heat Shock Proteins: New Insights and Therapeutic Implications
inferredcites →https://doi.org/10.6061/clinics/2018/e792sopenalex-snapshot
Platelet activating factor receptor antagonists improve the efficacy of experimental chemo- and radiotherapy

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4765151openalex-extracted
Genes Involved in the Cholecystokinin Receptor Signaling Map Were Differentially Expressed in the Jejunum of Steers with Variation in Residual Feed Intake
inferred← citeshttps://doi.org/10.1016/j.jgg.2023.01.011openalex-snapshot
Genomic and transcriptomic analyses enable the identification of important genes associated with subcutaneous fat deposition in Holstein cows
inferred← citeshttps://doi.org/10.1016/j.vas.2024.100357openalex-snapshot
Genes involved in the cholecystokinin receptor signaling map were differentially expressed in the jejunum of steers with variation in residual feed intake
inferred← citeshttps://doi.org/10.1016/j.ygeno.2026.111250openalex-snapshot
The mitochondria-mediated regulation network on cellular oxygen metabolism capacity revealed by bovine cybrids model
inferred← citeshttps://doi.org/10.1038/s40494-025-02276-8openalex-snapshot
Insecticidal effects of nitrogen-based hypoxia–anoxia and pressure regulation on Lasioderma serricorne in paper artefacts
inferred← citeshttps://doi.org/10.1080/1828051x.2021.1963864openalex-snapshot
Genome-wide association study for residual concentrate intake using different approaches in Italian Brown Swiss
inferred← citeshttps://doi.org/10.1186/s12864-021-07676-1openalex-snapshot
Genome-wide detection of CNVs and their association with performance traits in broilers
inferred← citeshttps://doi.org/10.1186/s12864-021-07843-4openalex-snapshot
Analysis of merged whole blood transcriptomic datasets to identify circulating molecular biomarkers of feed efficiency in growing pigs
inferred← citeshttps://doi.org/10.20961/lar.v19i2.48557openalex-snapshot
Effect of polymorphism of Insulin-induced gene 1 (INSIG1) (A4366G) on slaughter characteristics in unproductive Kebumen Ongole Grade cows
inferred← citeshttps://doi.org/10.3389/fanim.2024.1468575openalex-snapshot
West African cattle share non-random heterozygosity-rich region islands enriched on adaptation-related genes despite their different origins
inferred← citeshttps://doi.org/10.3389/fgene.2021.737906openalex-snapshot
Genomic Selection and Genome-wide Association Study for Feed-Efficiency Traits in a Farmed Nile Tilapia (Oreochromis niloticus) Population
inferred← citeshttps://doi.org/10.3389/fgene.2022.983043openalex-snapshot
Recent developments and future directions in meta-analysis of differential gene expression in livestock RNA-Seq
inferred← citeshttps://doi.org/10.3389/fgene.2023.1102136openalex-snapshot
Gene expression networks and functionally enriched pathways involved in the response of domestic chicken to acute heat stress
inferred← citeshttps://doi.org/10.3389/fgene.2023.1304638openalex-snapshot
Multi-tissue transcriptome analysis to identify candidate genes associated with weight regulation in Hanwoo cattle
inferred← citeshttps://doi.org/10.3390/ani12121514openalex-snapshot
Genes Involved in Feed Efficiency Identified in a Meta-Analysis of Rumen Tissue from Two Populations of Beef Steers
inferred← citeshttps://doi.org/10.3390/ani15182667openalex-snapshot
Uncovering Genetic Diversity and Adaptive Candidate Genes in the Mugalzhar Horse Breed Using Whole-Genome Sequencing Data
inferred← citeshttps://doi.org/10.3390/genes15121516openalex-snapshot
Combined Use of Univariate and Multivariate Approaches to Detect Selection Signatures Associated with Milk or Meat Production in Cattle
inferred← citeshttps://doi.org/10.3390/ijms26104633openalex-snapshot
The Association Between Hematological Profiles and Whole-Blood Transcriptome Genes Identified Using Quantitative Analysis with Average Daily Gain and Feed Efficiency in Forage-Fed Beef Heifers
inferred← citeshttps://doi.org/10.33915/etd.12535openalex-snapshot
Hepatic mRNA Expression of Innate and Adaptive Immune Genes in Beef Steers with Divergent Residual Body Weight Gain
inferred← citeshttps://doi.org/10.5713/ab.23.0297openalex-snapshot
Evaluation of genetic differentiation and search for candidate genes for reproductive traits in pigs
inferred← citeshttps://doi.org/10.6084/m9.figshare.14906217openalex-snapshot
Additional file 1 of Analysis of merged whole blood transcriptomic datasets to identify circulating molecular biomarkers of feed efficiency in growing pigs
inferred← citeshttps://doi.org/10.6084/m9.figshare.14906220openalex-snapshot
Additional file 2 of Analysis of merged whole blood transcriptomic datasets to identify circulating molecular biomarkers of feed efficiency in growing pigs
inferred← citeshttps://doi.org/10.6084/m9.figshare.14906223openalex-snapshot
Additional file 3 of Analysis of merged whole blood transcriptomic datasets to identify circulating molecular biomarkers of feed efficiency in growing pigs
inferred← citeshttps://doi.org/10.6084/m9.figshare.14906226openalex-snapshot
Additional file 4 of Analysis of merged whole blood transcriptomic datasets to identify circulating molecular biomarkers of feed efficiency in growing pigs
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