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Confocal Raman microscopy to identify bacteria in oral subgingival biofilm models

https://doi.org/10.1371/journal.pone.0232912
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/jrs.1734openalex-snapshot
Reference database of Raman spectra of biological molecules
inferredcites →https://doi.org/10.1002/jrs.4844openalex-snapshot
The application of Raman spectroscopy for the detection and identification of microorganisms
inferredcites →https://doi.org/10.1007/s00216-006-0663-3openalex-snapshot
A new approach to non-destructive analysis of biofilms by confocal Raman microscopy
inferredcites →https://doi.org/10.1007/s00216-012-6225-yopenalex-snapshot
Surface-enhanced Raman scattering (SERS) revealing chemical variation during biofilm formation: from initial attachment to mature biofilm
inferredcites →https://doi.org/10.1007/s00216-018-1485-9openalex-snapshot
Fast discrimination of bacteria using a filter paper–based SERS platform and PLS-DA with uncertainty estimation
inferredcites →https://doi.org/10.1007/s11947-011-0516-8openalex-snapshot
Application of Mid-infrared and Raman Spectroscopy to the Study of Bacteria
inferredcites →https://doi.org/10.1016/j.colsurfb.2019.110765openalex-snapshot
Biofilm formation of clinically important microorganisms on 2D and 3D poly (methyl methacrylate) substrates: A surface-enhanced Raman scattering study
inferredcites →https://doi.org/10.1016/j.phytochem.2014.09.004openalex-snapshot
Developmental changes in leaf phenolics composition from three artichoke cvs. (Cynara scolymus) as determined via UHPLC–MS and chemometrics
inferredcites →https://doi.org/10.1016/s0003-9969(97)00111-8openalex-snapshot
Binding properties of streptococcal glucosyltransferases for hydroxyapatite, saliva-coated hydroxyapatite, and bacterial surfaces
inferredcites →https://doi.org/10.1021/acs.biochem.7b00116openalex-snapshot
Defining Molecular Details of the Chemistry of Biofilm Formation by Raman Microspectroscopy
inferredcites →https://doi.org/10.1034/j.1600-051x.2000.027009648.xopenalex-snapshot
Comparison of the microbiota of supra‐ and subgingival plaque in health and periodontitis
inferredcites →https://doi.org/10.1038/ijos.2017.8openalex-snapshot
Biofilm three-dimensional architecture influences in situ pH distribution pattern on the human enamel surface
inferredcites →https://doi.org/10.1038/ismej.2012.174openalex-snapshot
The subgingival microbiome in health and periodontitis and its relationship with community biomass and inflammation
inferredcites →https://doi.org/10.1038/s41598-017-10448-1openalex-snapshot
Raman spectroscopy uncovers biochemical tissue-related features of extracellular vesicles from mesenchymal stromal cells
inferredcites →https://doi.org/10.1038/s41598-017-13940-wopenalex-snapshot
Rapid identification of staphylococci by Raman spectroscopy
inferredcites →https://doi.org/10.1039/c5cs00540jopenalex-snapshot
Raman and infra-red microspectroscopy: towards quantitative evaluation for clinical research by ratiometric analysis
inferredcites →https://doi.org/10.1039/c7an02106bopenalex-snapshot
Raman spectroscopic analysis of the molecular composition of oral cavity squamous cell carcinoma and healthy tongue tissue
inferredcites →https://doi.org/10.1080/09500340308233569openalex-snapshot
Identification of oral bacteria by Raman microspectroscopy
inferredcites →https://doi.org/10.1088/2057-1976/2/6/065006openalex-snapshot
Evaluation of bacterial presence in the root canal by Raman spectroscopy: a preliminary study
inferredcites →https://doi.org/10.1111/j.1600-051x.1998.tb02419.xopenalex-snapshot
Microbial complexes in subgingival plaque
inferredcites →https://doi.org/10.1111/j.1600-0765.1996.tb00484.xopenalex-snapshot
Clinical, microbiological and immunological profile of healthy, gingivitis and putative active periodontal subjects
inferredcites →https://doi.org/10.1117/1.1803844openalex-snapshot
Measurement of bacterial concentration fractions in polymicrobial mixtures by Raman microspectroscopy
inferredcites →https://doi.org/10.1117/1.3505010openalex-snapshot
Identification of different bacterial species in biofilms using confocal Raman microscopy
inferredcites →https://doi.org/10.1117/12.2002301openalex-snapshot
Raman microspectrometer combined with scattering microscopy and lensless imaging for bacteria identification
inferredcites →https://doi.org/10.1117/12.871819openalex-snapshot
Confocal Raman microscopy for identification of bacterial species in biofilms
inferredcites →https://doi.org/10.1128/iai.18.3.726-734.1977openalex-snapshot
Adherence of Veillonella Species Mediated by Extracellular Glucosyltransferase from Streptococcus salivarius
inferredcites →https://doi.org/10.1128/iai.42.2.459-470.1983openalex-snapshot
Antigenic heterogeneity of Bacteroides intermedius as recognized by monoclonal antibodies
inferredcites →https://doi.org/10.1128/jb.01649-09openalex-snapshot
Exopolysaccharides Produced by Streptococcus mutans Glucosyltransferases Modulate the Establishment of Microcolonies within Multispecies Biofilms
inferredcites →https://doi.org/10.1128/mbio.01926-14openalex-snapshot
Dynamic Changes in the Subgingival Microbiome and Their Potential for Diagnosis and Prognosis of Periodontitis
inferredcites →https://doi.org/10.1155/2012/540490openalex-snapshot
Raman Spectroscopy of Bacterial Species and Strains Cultivated under Reproducible Conditions
inferredcites →https://doi.org/10.1159/000329667openalex-snapshot
Subgingival Biofilm Structure
inferredcites →https://doi.org/10.1177/00220345010800011201openalex-snapshot
Validation of an in vitro Biofilm Model of Supragingival Plaque
inferredcites →https://doi.org/10.1186/1471-2180-9-280openalex-snapshot
In vitromodeling of host-parasite interactions: the 'subgingival' biofilm challenge of primary human epithelial cells
inferredcites →https://doi.org/10.1186/2191-0855-2-35openalex-snapshot
Raman microspectroscopy for species identification and mapping within bacterial biofilms
inferredcites →https://doi.org/10.1364/boe.5.003238openalex-snapshot
Evaluation of antibiotic effects on Pseudomonas aeruginosa biofilm using Raman spectroscopy and multivariate analysis
inferredcites →https://doi.org/10.1371/journal.pone.0173973openalex-snapshot
An oral multispecies biofilm model for high content screening applications
inferredcites →https://doi.org/10.14429/dlsj.2.12275openalex-snapshot
Detection and classification of Bacteria using Raman Spectroscopy Combined with Multivariate Analysis
inferredcites →https://doi.org/10.3389/fmicb.2018.02999openalex-snapshot
Soil Particles and Phenanthrene Interact in Defining the Metabolic Profile of Pseudomonas putida G7: A Vibrational Spectroscopy Approach
inferredcites →https://doi.org/10.3389/fmicb.2019.01716openalex-snapshot
Fusobacterium Species and Subspecies Differentially Affect the Composition and Architecture of Supra- and Subgingival Biofilms Models
inferredcites →https://doi.org/10.3389/fphar.2019.00845openalex-snapshot
Dissecting the Metabolic Phenotype of the Antihypertensive Effects of Five Uncaria Species on Spontaneously Hypertensive Rats
inferredcites →https://doi.org/10.3390/bios9010025openalex-snapshot
The Recent Advances in Raman Microscopy and Imaging Techniques for Biosensors
inferredcites →https://doi.org/10.3390/chemosensors6010005openalex-snapshot
Raman and Surface-Enhanced Raman Scattering for Biofilm Characterization
inferredcites →https://doi.org/10.3390/nano7090248openalex-snapshot
Characterization and Discrimination of Gram-Positive Bacteria Using Raman Spectroscopy with the Aid of Principal Component Analysis
inferredcites →https://doi.org/10.4161/viru.2.5.16140openalex-snapshot
Bacterial interactions in dental biofilm
inferredcites →https://doi.org/10.7416/ai.2013.1904openalex-snapshot
Analytical techniques to study microbial biofilm on abiotic surfaces: pros and cons of the main techniques currently in use.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1002/9783527698042.ch8openalex-snapshot
Interactions Between Surface Material and Bacteria: From Biofilm Formation to Suppression
inferred← citeshttps://doi.org/10.1002/bab.2741openalex-snapshot
Diagnosis Accuracy of Raman Spectroscopy in the Identification of Pathogenic Bacteria
inferred← citeshttps://doi.org/10.1002/jrs.6204openalex-snapshot
Raman spectroscopy in cell biology and microbiology
inferred← citeshttps://doi.org/10.1002/jrs.6237openalex-snapshot
Correlation of crystal violet biofilm test results of Staphylococcus aureus clinical isolates with Raman spectroscopic read‐out
inferred← citeshttps://doi.org/10.1002/tbio.202200011openalex-snapshot
Application of Raman spectroscopy in the hospital environment
inferred← citeshttps://doi.org/10.1007/978-3-031-28624-7_11openalex-snapshot
Metabolic/Endocrine Disorders
inferred← citeshttps://doi.org/10.1007/s00216-021-03642-8openalex-snapshot
Fast label-free identification of bacteria by synchronous fluorescence of amino acids
inferred← citeshttps://doi.org/10.1007/s11306-024-02220-0openalex-snapshot
The role of salivary metabolomics in chronic periodontitis: bridging oral and systemic diseases
inferred← citeshttps://doi.org/10.1016/j.coemr.2021.04.005openalex-snapshot
Recent progress in analyzing the spatial structure of the human microbiome: Distinguishing biogeography and architecture in the oral and gut communities
inferred← citeshttps://doi.org/10.1016/j.msec.2021.112109openalex-snapshot
Construction and performance evaluation of a sustained release implant material polyetheretherketone with antibacterial properties
inferred← citeshttps://doi.org/10.1016/j.saa.2025.126513openalex-snapshot
Rapid profiling of between-species metabolic interactions in cocultures by D2O‑probed single-cell Raman microspectroscopy
inferred← citeshttps://doi.org/10.1038/s41368-023-00264-xopenalex-snapshot
Omics for deciphering oral microecology
inferred← citeshttps://doi.org/10.1038/s43586-021-00075-6openalex-snapshot
Raman microspectroscopy for microbiology
inferred← citeshttps://doi.org/10.1039/d5an00165jopenalex-snapshot
Differentiation and identification of commensal and pathogenic oral bacteria at strain level using ATR-FTIR spectroscopy
inferred← citeshttps://doi.org/10.1080/05704928.2021.1913744openalex-snapshot
Raman spectroscopy and multivariate regression analysis in biomedical research, medical diagnosis, and clinical analysis
inferred← citeshttps://doi.org/10.1080/09205063.2022.2088524openalex-snapshot
A preliminary study on surface bioactivation of polyaryletherketone by UV-grafting with PolyNaSS: influence on osteogenic and antibacterial activities
inferred← citeshttps://doi.org/10.1080/1040841x.2025.2555937openalex-snapshot
Under the lens: using Raman spectroscopy as a unique system in biofilm analyses
inferred← citeshttps://doi.org/10.1111/jcmm.18292openalex-snapshot
Rapid discrimination of four Salmonella enterica serovars: A performance comparison between benchtop and handheld Raman spectrometers
inferred← citeshttps://doi.org/10.1117/1.jbo.28.2.025002openalex-snapshot
Open-sourced Raman spectroscopy data processing package implementing a baseline removal algorithm validated from multiple datasets acquired in human tissue and biofluids
inferred← citeshttps://doi.org/10.1117/12.3042855openalex-snapshot
Spectroscopic analysis and classification of oral bacteria in mixed samples using FTIR spectroscopy and deep learning
inferred← citeshttps://doi.org/10.1145/3639592.3639614openalex-snapshot
Emerging IoT-Spectroscopy Methods for Targeted Water Pollutants in Household Point-of-Use (POUs) Environments
inferred← citeshttps://doi.org/10.31083/j.fbl2904133openalex-snapshot
Investigating Biofilms: Advanced Methods for Comprehending Microbial Behavior and Antibiotic Resistance
inferred← citeshttps://doi.org/10.3389/fcimb.2022.775236openalex-snapshot
Raman Spectroscopy: A Potential Diagnostic Tool for Oral Diseases
inferred← citeshttps://doi.org/10.3389/fmicb.2021.729720openalex-snapshot
Mapping of a Subgingival Dual-Species Biofilm Model Using Confocal Raman Microscopy
inferred← citeshttps://doi.org/10.3389/fmicb.2022.874658openalex-snapshot
Identification of foodborne pathogenic bacteria using confocal Raman microspectroscopy and chemometrics
inferred← citeshttps://doi.org/10.3389/fmicb.2026.1872435openalex-snapshot
Portable Raman spectroscopy combined with machine learning for rapid and label-free recognition of five pathogenic bacteria
inferred← citeshttps://doi.org/10.3390/cells9092139openalex-snapshot
Neutrophil Extracellular Traps Promote the Development and Growth of Human Salivary Stones
inferred← citeshttps://doi.org/10.3390/photonics12020103openalex-snapshot
Correction of Wavefront Distortion in Common Aperture Optical Systems Based on Freeform Lens
inferred← citeshttps://doi.org/10.3390/photonics9030133openalex-snapshot
A Review of Raman-Based Technologies for Bacterial Identification and Antimicrobial Susceptibility Testing
inferred← citeshttps://doi.org/10.3934/microbiol.2024020openalex-snapshot
Characterization and morphological methods for oral biofilm visualization: where are we nowadays?
inferred← citeshttps://doi.org/10.53555/ajbr.v27i4s.5060openalex-snapshot
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