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Atlas of the Immune System Development in the Fetal Blood

https://doi.org/10.2139/ssrn.4883498
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Microbial exposure during early human development primes fetal immune cells
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Maturation of the Human Intestinal Immune System Occurs Early in Fetal Development
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Human T Cell Development, Localization, and Function throughout Life
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Interferons and Proinflammatory Cytokines in Pregnancy and Fetal Development
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Different evolutionary pathways of HIV-1 between fetus and mother perinatal transmission pairs indicate unique immune selection in fetuses
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The development of the immune system during pregnancy and early life
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Regulation of an extrathymic T-cell development pathway by oncostatin M
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Antagonism of cytotoxic T-lymphocyte activation by soluble CD8
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Human γδT-cell subsets and their involvement in tumor immunity
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Human fetal dendritic cells promote prenatal T-cell immune suppression through arginase-2
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Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype
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Dandelion uses the single-cell adaptive immune receptor repertoire to explore lymphocyte developmental origins
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Dictionary learning for integrative, multimodal and scalable single-cell analysis
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Memory CD4+ T cells are generated in the human fetal intestine
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CD8+NKT-like cells regulate the immune response by killing antigen-bearing DCs
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2. Cytokines and chemokines
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Competition for self-peptide-MHC complexes and cytokines between naïve and memory CD8 + T cells expressing the same or different T cell receptors
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Naive T cells proliferate strongly in neonatal mice in response to self-peptide/self-MHC complexes
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Genetic landscape and autoimmunity of monocytes in developing Vogt–Koyanagi–Harada disease
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The human fetal thymus generates invariant effector γδ T cells
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Scirpy: a Scanpy extension for analyzing single-cell T-cell receptor-sequencing data
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featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
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Complex heatmaps reveal patterns and correlations in multidimensional genomic data
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IMGT® databases, related tools and web resources through three main axes of research and development
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IMGT/V-QUEST: the highly customized and integrated system for IG and TR standardized V-J and V-D-J sequence analysis
inferredcites →https://doi.org/10.1093/nar/gkr424openalex-snapshot
Homogeneous antibody-based proximity extension assays provide sensitive and specific detection of low-abundant proteins in human blood
inferredcites →https://doi.org/10.1097/00007890-200203270-00027openalex-snapshot
Association of CD8+ natural killer T cells in the liver with neonatal tolerance phenomenon1
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Terminal deoxynucleotidyl transferase and repertoire development
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Human PBMC scRNA-seq–based aging clocks reveal ribosome to inflammation balance as a single-cell aging hallmark and super longevity
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Lack of N Regions in Antigen Receptor Variable Region Genes of TdT-Deficient Lymphocytes
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A cell atlas of human thymic development defines T cell repertoire formation
inferredcites →https://doi.org/10.1126/science.aaz9330openalex-snapshot
Prenatal development of human immunity
inferredcites →https://doi.org/10.1126/science.abl5197openalex-snapshot
Cross-tissue immune cell analysis reveals tissue-specific features in humans
inferredcites →https://doi.org/10.1126/science.abo0510openalex-snapshot
Mapping the developing human immune system across organs
inferredcites →https://doi.org/10.1126/scitranslmed.aaa0072openalex-snapshot
Timely and spatially regulated maturation of B and T cell repertoire during human fetal development
inferredcites →https://doi.org/10.1152/ajpgi.00208.2022openalex-snapshot
Fibroblast growth factor 19 secretion and function in perinatal development
inferredcites →https://doi.org/10.1160/th07-01-0040openalex-snapshot
Chemokines as mediators of angiogenesis
inferredcites →https://doi.org/10.1182/blood-2010-02-258558openalex-snapshot
Nomenclature of monocytes and dendritic cells in blood
inferredcites →https://doi.org/10.1182/blood-2010-09-303057openalex-snapshot
Dissecting CD56dim human NK cells
inferredcites →https://doi.org/10.1182/blood.v98.9.2745openalex-snapshot
Slow, programmed maturation of the immunoglobulin HCDR3 repertoire during the third trimester of fetal life
inferredcites →https://doi.org/10.1186/gb-2008-9-7-r119openalex-snapshot
The IL-10 and IFN-γ pathways are essential to the potent immunosuppressive activity of cultured CD8+NKT-like cells
inferredcites →https://doi.org/10.1186/s12859-021-04528-3openalex-snapshot
scDIOR: single cell RNA-seq data IO software
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xCell: digitally portraying the tissue cellular heterogeneity landscape
inferredcites →https://doi.org/10.1186/s13059-017-1382-0openalex-snapshot
SCANPY: large-scale single-cell gene expression data analysis
inferredcites →https://doi.org/10.3389/fimmu.2020.00588openalex-snapshot
Mechanisms of Fetal T Cell Tolerance and Immune Regulation
inferredcites →https://doi.org/10.3389/fimmu.2021.714090openalex-snapshot
Single-Cell Analysis of the Neonatal Immune System Across the Gestational Age Continuum
inferredcites →https://doi.org/10.3389/fimmu.2021.717808openalex-snapshot
Cytokines, Hormones and Cellular Regulatory Mechanisms Favoring Successful Reproduction
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Interleukin-18 cytokine in immunity, inflammation, and autoimmunity: Biological role in induction, regulation, and treatment
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Advances in the study of HLA class Ib in maternal-fetal immune tolerance
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Soluble CD5 and CD6: Lymphocytic Class I Scavenger Receptors as Immunotherapeutic Agents
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Maternal and Infant Immune Repertoire Sequencing Analysis Identifies Distinct Ig and TCR Development in Term and Preterm Infants
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MMP-10 from M1 macrophages promotes pulmonary vascular remodeling and pulmonary arterial hypertension
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