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Adaptive Introgression of Carotenoid Processing Genes that Underlie Bill Color Variation in the Long-Tailed Finch

https://doi.org/10.2139/ssrn.4897852
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Carotenoid-based coloration in cichlid fishes
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Red Carotenoid Coloration in the Zebra Finch Is Controlled by a Cytochrome P450 Gene Cluster
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The Evolution and Genetics of Carotenoid Processing in Animals
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Avian Coloration Genetics: Recent Advances and Emerging Questions
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Testosterone Coordinates Gene Expression Across Different Tissues to Produce Carotenoid-Based Red Ornamentation
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rehh 2.0: a reimplementation of the R package rehh to detect positive selection from haplotype structure
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Bayesian hybrid index and genomic cline estimation with the R package gghybrid
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GENOMIC AND MORPHOLOGICAL ANALYSIS OF A SEMIPERMEABLE AVIAN HYBRID ZONE SUGGESTS ASYMMETRICAL INTROGRESSION OF A SEXUAL SIGNAL
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Speciation is associated with changing ornamentation rather than stronger sexual selection
inferredcites →https://doi.org/10.1111/evo.13093openalex-snapshot
Evolutionary innovation and diversification of carotenoid‐based pigmentation in finches
inferredcites →https://doi.org/10.1111/evo.13982openalex-snapshot
Speciation rates are correlated with changes in plumage color complexity in the largest family of songbirds
inferredcites →https://doi.org/10.1111/evo.14243openalex-snapshot
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SEXUAL SELECTION ON PLUMAGE AND BEHAVIOR IN AN AVIAN HYBRID ZONE: EXPERIMENTAL TESTS OF MALE-MALE INTERACTIONS
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UNIDIRECTIONAL INTROGREESION OF A SEXUALLY SELECTED TRAIT ACROSS AN AVIAN HYBRID ZONE: A ROLE FOR FEMALE CHOICE?
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Sex chromosome inversions enforce reproductive isolation across an avian hybrid zone
inferredcites →https://doi.org/10.1111/mec.15691openalex-snapshot
CYP2J19 mediates carotenoid colour introgression across a natural avian hybrid zone
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Unidirectional Spread of Secondary Sexual Plumage Traits Across an Avian Hybrid Zone
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The biology of color
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Protein tyrosine phosphatase receptor type C (PTPRC or CD45)
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CD45: A Critical Regulator of Signaling Thresholds in Immune Cells
inferredcites →https://doi.org/10.1163/000579510x548673openalex-snapshot
Carotenoid-based signals in behavioural ecology: a review
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The Prime Role of HDL to Transport Lutein into the Retina: Evidence from HDL-Deficient WHAM Chicks Having a Mutant ABCA1 Transporter
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Polygenic Modeling with Bayesian Sparse Linear Mixed Models
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An approximate full-likelihood method for inferring selection and allele frequency trajectories from DNA sequence data
inferredcites →https://doi.org/10.1371/journal.pone.0262024openalex-snapshot
Detecting selection using extended haplotype homozygosity (EHH)-based statistics in unphased or unpolarized data
inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot
Cutadapt removes adapter sequences from high-throughput sequencing reads
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Improved HPLC method for the analysis of chlorophylls and carotenoids from marine phytoplankton
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Loss of Carotenoid Plumage Coloration Is Associated With Loss of Choice for Coloration in Domestic Canaries
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Evolution, Development and Function of Vertebrate Cone Oil Droplets
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Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM
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A paternal bias in germline mutation is widespread in amniotes and can arise independently of cell division numbers
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