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Comparative Untargeted Metabolomics Method Development for Biomarker Discovery

https://doi.org/10.2139/ssrn.5370708
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Recent advances in LC‐MS‐based metabolomics for clinical biomarker discovery
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UPLC/MS E ; a new approach for generating molecular fragment information for biomarker structure elucidation
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Advancing untargeted metabolomics using data-independent acquisition mass spectrometry technology
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Mass appeal: metabolite identification in mass spectrometry-focused untargeted metabolomics
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Data-controlled automation of liquid chromatography/tandem mass spectrometry analysis of peptide mixtures
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Reviewing the metabolome coverage provided by LC-MS: Focus on sample preparation and chromatography-A tutorial
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Targeting unique biological signals on the fly to improve MS/MS coverage and identification efficiency in metabolomics
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A large-scale, targeted metabolomics method for the analysis and quantification of metabolites in human plasma via liquid chromatography-mass spectrometry
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Inosine induces stemness features in CAR-T cells and enhances potency
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Data acquisition workflows in liquid chromatography coupled to high resolution mass spectrometry-based metabolomics: Where do we stand?
inferredcites →https://doi.org/10.1016/j.drudis.2007.01.007openalex-snapshot
Current and future trends in the application of HPLC-MS to metabolite-identification studies
inferredcites →https://doi.org/10.1016/j.jchromb.2019.04.009openalex-snapshot
Untargeted LC/MS-based metabolic phenotyping (metabonomics/metabolomics): The state of the art
inferredcites →https://doi.org/10.1016/j.trac.2018.11.022openalex-snapshot
From mass to metabolite in human untargeted metabolomics: Recent advances in annotation of metabolites applying liquid chromatography-mass spectrometry data
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A polyamine-centric, blood-based metabolite panel predictive of poor response to CAR-T cell therapy in large B cell lymphoma
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Comparison of Information-Dependent Acquisition, SWATH, and MSAll Techniques in Metabolite Identification Study Employing Ultrahigh-Performance Liquid Chromatography–Quadrupole Time-of-Flight Mass Spectrometry
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Improved Data-Dependent Acquisition for Untargeted Metabolomics Using Gas-Phase Fractionation with Staggered Mass Range
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Rapid Development of Improved Data-Dependent Acquisition Strategies
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Discovering Regulated Metabolite Families in Untargeted Metabolomics Studies
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Development of a Liquid Chromatography–High Resolution Mass Spectrometry Metabolomics Method with High Specificity for Metabolite Identification Using All Ion Fragmentation Acquisition
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DecoMetDIA: Deconvolution of Multiplexed MS/MS Spectra for Metabolite Identification in SWATH-MS-Based Untargeted Metabolomics
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Comparison of Full-Scan, Data-Dependent, and Data-Independent Acquisition Modes in Liquid Chromatography–Mass Spectrometry Based Untargeted Metabolomics
inferredcites →https://doi.org/10.1038/nmeth.3393openalex-snapshot
MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis
inferredcites →https://doi.org/10.1038/nrm3314openalex-snapshot
Metabolomics: the apogee of the omics trilogy
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Axicabtagene Ciloleucel CAR T-Cell Therapy in Refractory Large B-Cell Lymphoma
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Tisagenlecleucel in Children and Young Adults with B-Cell Lymphoblastic Leukemia
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The Basic Principles of Chimeric Antigen Receptor Design
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CLIC-01: Manufacture and distribution of non-cryopreserved CAR-T cells for patients with CD19 positive hematologic malignancies
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Comparative Evaluation of Data Dependent and Data Independent Acquisition Workflows Implemented on an Orbitrap Fusion for Untargeted Metabolomics
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Microbial Metabolite 3-Indolepropionic Acid Mediates Immunosuppression
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Creating a Reliable Mass Spectral–Retention Time Library for All Ion Fragmentation-Based Metabolomics
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