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Household Environmental Characteristics Influence House Dust Metagenome

https://doi.org/10.2139/ssrn.5396665
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Microbial, environmental and anthropogenic factors influencing the indoor microbiome of the built environment
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Key determinants of the fungal and bacterial microbiomes in homes
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Movi: A fast and cache-efficient full-text pangenome index
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Modern urbanization has re-shaped the bacterial microbiome profiles of house dust in domestic environments
inferredcites →https://doi.org/10.1016/j.waojou.2020.100452openalex-snapshot
Modern urbanization has reshaped the bacterial microbiome profiles of house dust in domestic environments
inferredcites →https://doi.org/10.1021/es980580oopenalex-snapshot
Distribution of 2,4-Dichlorophenoxyacetic Acid in Floor Dust throughout Homes Following Homeowner and Commercial Lawn Applications: Quantitative Effects of Children, Pets, and Shoes
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Non-symbiotic Bradyrhizobium ecotypes dominate North American forest soils
inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot
Fast gapped-read alignment with Bowtie 2
inferredcites →https://doi.org/10.1038/s41467-019-13443-4openalex-snapshot
Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea
inferredcites →https://doi.org/10.1038/s41467-022-32243-xopenalex-snapshot
Linear and nonlinear correlation estimators unveil undescribed taxa interactions in microbiome data
inferredcites →https://doi.org/10.1038/s41467-025-56077-5openalex-snapshot
Incomplete human reference genomes can drive false sex biases and expose patient-identifying information in metagenomic data
inferredcites →https://doi.org/10.1038/s41586-023-05896-xopenalex-snapshot
A draft human pangenome reference
inferredcites →https://doi.org/10.1038/s41592-018-0141-9openalex-snapshot
Qiita: rapid, web-enabled microbiome meta-analysis
inferredcites →https://doi.org/10.1038/s41592-023-02092-7openalex-snapshot
Multigroup analysis of compositions of microbiomes with covariate adjustments and repeated measures
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Diversity of streptomycetes in water-damaged building materials based on 16S rDNA sequences
inferredcites →https://doi.org/10.1056/nejmoa1007302openalex-snapshot
Exposure to Environmental Microorganisms and Childhood Asthma
inferredcites →https://doi.org/10.1073/pnas.1313731110openalex-snapshot
Regulation of the immune system by biodiversity from the natural environment: An ecosystem service essential to health
inferredcites →https://doi.org/10.1073/pnas.1420815112openalex-snapshot
Continental-scale distributions of dust-associated bacteria and fungi
inferredcites →https://doi.org/10.1093/bib/bbaa290openalex-snapshot
NetCoMi: network construction and comparison for microbiome data in R
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/bty191openalex-snapshot
Minimap2: pairwise alignment for nucleotide sequences
inferredcites →https://doi.org/10.1093/bioinformatics/bty560openalex-snapshot
fastp: an ultra-fast all-in-one FASTQ preprocessor
inferredcites →https://doi.org/10.1098/rspb.2015.1139openalex-snapshot
The ecology of microscopic life in household dust
inferredcites →https://doi.org/10.1099/ijs.0.63388-0openalex-snapshot
Treponema berlinense sp. nov. and Treponema porcinum sp. nov., novel spirochaetes isolated from porcine faeces
inferredcites →https://doi.org/10.1099/ijsem.0.001065openalex-snapshot
Transfer of eleven species of the genus Burkholderia to the genus Paraburkholderia and proposal of Caballeronia gen. nov. to accommodate twelve species of the genera Burkholderia and Paraburkholderia
inferredcites →https://doi.org/10.1099/mgen.0.001061openalex-snapshot
The gut microbiome and resistome of conventionally vs. pasture-raised pigs
inferredcites →https://doi.org/10.1099/mic.0.29254-0openalex-snapshot
Study of the population structure of Haemophilus parasuis by multilocus sequence typing
inferredcites →https://doi.org/10.1101/gr.213611.116openalex-snapshot
Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly
inferredcites →https://doi.org/10.1111/ina.12035openalex-snapshot
Stenotrophomonas, Mycobacterium,andStreptomycesin home dust and air: associations with moldiness and other home/family characteristics
inferredcites →https://doi.org/10.1111/ina.12205openalex-snapshot
Influence of housing characteristics on bacterial and fungal communities in homes of asthmatic children
inferredcites →https://doi.org/10.1111/jam.13250openalex-snapshot
Shoe soles as a potential vector for pathogen transmission: a systematic review
inferredcites →https://doi.org/10.1126/science.abj6987openalex-snapshot
The complete sequence of a human genome
inferredcites →https://doi.org/10.1128/aem.00588-06openalex-snapshot
Mycobacteria and Fungi in Moisture-Damaged Building Materials
inferredcites →https://doi.org/10.1128/aem.02140-06openalex-snapshot
Isolation and Characterization of Soil Bacteria That Define Terriglobus gen. nov., in the Phylum Acidobacteria
inferredcites →https://doi.org/10.1186/s40168-019-0743-1openalex-snapshot
Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms
inferredcites →https://doi.org/10.1289/ehp.96104362openalex-snapshot
The Agricultural Health Study
inferredcites →https://doi.org/10.1371/journal.pone.0061217openalex-snapshot
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
inferredcites →https://doi.org/10.1371/journal.pone.0087093openalex-snapshot
Architectural Design Drives the Biogeography of Indoor Bacterial Communities
inferredcites →https://doi.org/10.1371/journal.pone.0091283openalex-snapshot
Airborne Bacterial Communities in Residences: Similarities and Differences with Fungi
inferredcites →https://doi.org/10.2307/4615733openalex-snapshot
A Simple Sequentially Rejective Multiple Test Procedure
inferredcites →https://doi.org/10.32614/cran.package.veganopenalex-snapshot
vegan: Community Ecology Package
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
inferredcites →https://doi.org/10.3389/fmicb.2023.1202194openalex-snapshot
Metagenomics reveals novel microbial signatures of farm exposures in house dust
inferredcites →https://doi.org/10.48130/animadv-0024-0002openalex-snapshot
Lignocellulolytic microbiomes orchestrating degradation cascades in the rumen of dairy cattle and their diet-influenced key degradation phases
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