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Genotypic Variation in Miscanthus × giganteus Influences the Structure and Function of Soil Nitrifiers

https://doi.org/10.2139/ssrn.5524923
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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-3-642-60966-4openalex-snapshot
Methods in Soil Biology
inferredcites →https://doi.org/10.1007/bf01049492openalex-snapshot
Nitrification inhibitors in agriculture and horticulture: A literature review
inferredcites →https://doi.org/10.1007/s00374-022-01645-wopenalex-snapshot
Recommendations about soil Biological Nitrification Inhibition (BNI) studies
inferredcites →https://doi.org/10.1007/s11104-006-9159-3openalex-snapshot
Biological nitrification inhibition (BNI)—is it a widespread phenomenon?
inferredcites →https://doi.org/10.1007/s11104-012-1419-9openalex-snapshot
Biological nitrification inhibition (BNI) activity in sorghum and its characterization
inferredcites →https://doi.org/10.1007/s11104-016-2822-4openalex-snapshot
Identification of several wheat landraces with biological nitrification inhibition capacity
inferredcites →https://doi.org/10.1007/s11104-022-05609-9openalex-snapshot
Rice genotype affects nitrification inhibition in the rhizosphere
inferredcites →https://doi.org/10.1007/s11368-015-1086-6openalex-snapshot
The effect of nitrification inhibitors in reducing nitrification and the ammonia oxidizer population in three contrasting soils
inferredcites →https://doi.org/10.1007/s11368-021-02897-zopenalex-snapshot
Ammonia-oxidizing archaea are dominant over comammox in soil nitrification under long-term nitrogen fertilization
inferredcites →https://doi.org/10.1007/s12155-020-10139-2openalex-snapshot
Biomass Production of Prairie Cordgrass (Spartina pectinata Link.) Using Urea and Kura Clover (Trifolium ambiguum Bieb.) as a Source of Nitrogen
inferredcites →https://doi.org/10.1007/s12275-014-4114-0openalex-snapshot
The history of aerobic ammonia oxidizers: from the first discoveries to today
inferredcites →https://doi.org/10.1016/b978-0-12-820202-9.00015-0openalex-snapshot
Transformations of nitrogen
inferredcites →https://doi.org/10.1016/j.agrformet.2008.03.010openalex-snapshot
Meta-analysis of the effects of management factors on Miscanthus×giganteus growth and biomass production
inferredcites →https://doi.org/10.1016/j.biombioe.2003.10.005openalex-snapshot
A quantitative review comparing the yields of two candidate C4 perennial biomass crops in relation to nitrogen, temperature and water
inferredcites →https://doi.org/10.1016/j.biombioe.2021.106275openalex-snapshot
Adoption of perennial energy crops in the US Midwest: Causal and heterogeneous determinants
inferredcites →https://doi.org/10.1016/j.ecoleng.2015.05.047openalex-snapshot
Optimizing net greenhouse gas balance of a bioenergy cropping system in southeast China with urease and nitrification inhibitors
inferredcites →https://doi.org/10.1016/j.ejsobi.2022.103452openalex-snapshot
Responses of nitrification and denitrification in the rhizosphere of mudflat paddy to rice genotype and nitrogen fertilization
inferredcites →https://doi.org/10.1016/j.hal.2008.08.015openalex-snapshot
Coastal nitrogen pollution: A review of sources and trends globally and regionally
inferredcites →https://doi.org/10.1016/j.indcrop.2008.02.009openalex-snapshot
Growth, yield and mineral content of Miscanthus×giganteus grown as a biofuel for 14 successive harvests
inferredcites →https://doi.org/10.1016/j.soilbio.2015.08.026openalex-snapshot
Importance of heterotrophic nitrification and dissimilatory nitrate reduction to ammonium in a cropland soil: Evidences from a 15N tracing study to literature synthesis
inferredcites →https://doi.org/10.1016/j.soilbio.2017.10.023openalex-snapshot
Nitrification and nitrifiers in acidic soils
inferredcites →https://doi.org/10.1016/j.soilbio.2020.108111openalex-snapshot
How microbes can, and cannot, be used to assess soil health
inferredcites →https://doi.org/10.1016/j.soilbio.2021.108242openalex-snapshot
Use and abuse of potential rates in soil microbiology
inferredcites →https://doi.org/10.1016/j.tim.2012.08.001openalex-snapshot
Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation
inferredcites →https://doi.org/10.1016/s0043-1354(00)00312-2openalex-snapshot
Development of nitrification inhibition assays using pure cultures of nitrosomonas and nitrobacter
inferredcites →https://doi.org/10.1016/s0168-9525(00)02024-2openalex-snapshot
EMBOSS: The European Molecular Biology Open Software Suite
inferredcites →https://doi.org/10.1016/s0961-9534(00)00032-5openalex-snapshot
Miscanthus: European experience with a novel energy crop
inferredcites →https://doi.org/10.1016/s0961-9534(03)00030-8openalex-snapshot
The development and current status of perennial rhizomatous grasses as energy crops in the US and Europe
inferredcites →https://doi.org/10.1017/s1751731113000761openalex-snapshot
Potential for biological nitrification inhibition to reduce nitrification and N2O emissions in pasture crop–livestock systems
inferredcites →https://doi.org/10.1021/jf062593oopenalex-snapshot
Nitrification Inhibitors from the Root Tissues of Brachiaria humidicola , a Tropical Grass
inferredcites →https://doi.org/10.1023/a:1022371130939openalex-snapshot
Origins of root-mediated pH changes in the rhizosphere and their responses to environmental constraints: A review
inferredcites →https://doi.org/10.1038/ismej.2014.252openalex-snapshot
Relationships between protein-encoding gene abundance and corresponding process are commonly assumed yet rarely observed
inferredcites →https://doi.org/10.1038/nature04983openalex-snapshot
Archaea predominate among ammonia-oxidizing prokaryotes in soils
inferredcites →https://doi.org/10.1038/nature16459openalex-snapshot
Complete nitrification by a single microorganism
inferredcites →https://doi.org/10.1038/nature16461openalex-snapshot
Complete nitrification by Nitrospira bacteria
inferredcites →https://doi.org/10.1038/ngeo613openalex-snapshot
Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils
inferredcites →https://doi.org/10.1038/nmeth.3869openalex-snapshot
DADA2: High-resolution sample inference from Illumina amplicon data
inferredcites →https://doi.org/10.1038/nmicrobiol.2016.242openalex-snapshot
Relic DNA is abundant in soil and obscures estimates of soil microbial diversity
inferredcites →https://doi.org/10.1038/nrmicro2504openalex-snapshot
Microbial seed banks: the ecological and evolutionary implications of dormancy
inferredcites →https://doi.org/10.1038/s41396-017-0025-5openalex-snapshot
The consequences of niche and physiological differentiation of archaeal and bacterial ammonia oxidisers for nitrous oxide emissions
inferredcites →https://doi.org/10.1038/s41587-019-0104-4openalex-snapshot
NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice
inferredcites →https://doi.org/10.1038/s43705-021-00020-4openalex-snapshot
Ammonia-oxidizing archaea are integral to nitrogen cycling in a highly fertile agricultural soil
inferredcites →https://doi.org/10.1073/pnas.1109000108openalex-snapshot
Niche specialization of terrestrial archaeal ammonia oxidizers
inferredcites →https://doi.org/10.1093/bioinformatics/btq461openalex-snapshot
Search and clustering orders of magnitude faster than BLAST
inferredcites →https://doi.org/10.1093/jxb/erx086openalex-snapshot
Ammonium as a signal for physiological and morphological responses in plants
inferredcites →https://doi.org/10.1111/1462-2920.13023openalex-snapshot
Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
inferredcites →https://doi.org/10.1111/aab.12014openalex-snapshot
Nitrogen losses from the soil/plant system: a review
inferredcites →https://doi.org/10.1111/gcb.15119openalex-snapshot
Global patterns and controlling factors of soil nitrification rate
inferredcites →https://doi.org/10.1111/gcb.15883openalex-snapshot
Global gross nitrification rates are dominantly driven by soil carbon‐to‐nitrogen stoichiometry and total nitrogen
inferredcites →https://doi.org/10.1111/gcbb.12152openalex-snapshot
Bioenergy crop greenhouse gas mitigation potential under a range of management practices
inferredcites →https://doi.org/10.1111/gcbb.12217openalex-snapshot
Effect of nitrogen addition on Miscanthus × giganteus yield, nitrogen losses, and soil organic matter across five sites
inferredcites →https://doi.org/10.1111/gcbb.12237openalex-snapshot
Soil carbon sequestration and land use change associated with biofuel production: empirical evidence
inferredcites →https://doi.org/10.1111/gcbb.12875openalex-snapshot
Soil net nitrogen mineralization and leaching under Miscanthus × giganteus and Zea mays
inferredcites →https://doi.org/10.1111/gcbb.12917openalex-snapshot
Intra‐ and inter‐annual variability of nitrification in the rhizosphere of field‐grown bioenergy sorghum
inferredcites →https://doi.org/10.1111/gcbb.13143openalex-snapshot
Nitrogen acquisition and retention pathways in sustainable perennial bioenergy grass cropping systems
inferredcites →https://doi.org/10.1111/gfs.12175openalex-snapshot
Wide variation in nitrification activity in soil associated with different forage plant cultivars and genotypes
inferredcites →https://doi.org/10.1111/j.1462-2920.2008.01701.xopenalex-snapshot
The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria
inferredcites →https://doi.org/10.1111/j.1462-2920.2008.01775.xopenalex-snapshot
Relative contributions of archaea and bacteria to aerobic ammonia oxidation in the environment
inferredcites →https://doi.org/10.1111/j.1462-2920.2011.02666.xopenalex-snapshot
amoA ‐based consensus phylogeny of ammonia‐oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions
inferredcites →https://doi.org/10.1111/j.1469-8137.2010.03563.xopenalex-snapshot
Responses of ecosystem nitrogen cycle to nitrogen addition: a meta‐analysis
inferredcites →https://doi.org/10.1111/j.1475-2743.1998.tb00136.xopenalex-snapshot
Nitrate leaching losses under Miscanthus grass planted on a silty clay loam soil
inferredcites →https://doi.org/10.1111/j.1475-2743.2007.00106.xopenalex-snapshot
Catch crop strategy and nitrate leaching following grazed grass‐clover
inferredcites →https://doi.org/10.1111/j.1574-6941.2010.00971.xopenalex-snapshot
Archaea rather than bacteria control nitrification in two agricultural acidic soils
inferredcites →https://doi.org/10.1111/nph.14057openalex-snapshot
Biological nitrification inhibition by rice root exudates and its relationship with nitrogen‐use efficiency
inferredcites →https://doi.org/10.1111/nph.17537openalex-snapshot
Genotypic variation in maize (Zea mays) influences rates of soil organic matter mineralization and gross nitrification
inferredcites →https://doi.org/10.1128/aem.01996-06openalex-snapshot
Quantitative and Qualitative β Diversity Measures Lead to Different Insights into Factors That Structure Microbial Communities
inferredcites →https://doi.org/10.1146/annurev-micro-092611-150128openalex-snapshot
Physiology and Diversity of Ammonia-Oxidizing Archaea
inferredcites →https://doi.org/10.1146/annurev.environ.032108.105046openalex-snapshot
Nitrogen in Agriculture: Balancing the Cost of an Essential Resource
inferredcites →https://doi.org/10.1371/journal.pone.0061217openalex-snapshot
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
inferredcites →https://doi.org/10.3354/ame01753openalex-snapshot
Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton
inferredcites →https://doi.org/10.3389/fmicb.2012.00252openalex-snapshot
Global Biodiversity of Aquatic Ammonia-Oxidizing Archaea is Partitioned by Habitat
inferredcites →https://doi.org/10.3389/fmicb.2017.01508openalex-snapshot
AmoA-Targeted Polymerase Chain Reaction Primers for the Specific Detection and Quantification of Comammox Nitrospira in the Environment
inferredcites →https://doi.org/10.3389/fpls.2020.00820openalex-snapshot
Biological Nitrification Inhibition (BNI): Phenotyping of a Core Germplasm Collection of the Tropical Forage Grass Megathyrsus maximus Under Greenhouse Conditions
inferredcites →https://doi.org/10.3390/microorganisms8111687openalex-snapshot
Nitrifying Microbes in the Rhizosphere of Perennial Grasses Are Modified by Biological Nitrification Inhibition
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