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Allosteric Mechanisms of Post-translational Modification Regulation in Human cGAS Catalytic Activity from Molecular Dynamics Simulations

https://doi.org/10.2139/ssrn.5958883
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inferredcites →https://doi.org/10.1002/(sici)1096-987x(199709)18:12<1463::aid-jcc4>3.0.co;2-hopenalex-snapshot
LINCS: A linear constraint solver for molecular simulations
inferredcites →https://doi.org/10.1002/jcc.20291openalex-snapshot
GROMACS: Fast, flexible, and free
inferredcites →https://doi.org/10.1016/0022-2836(71)90324-xopenalex-snapshot
The interpretation of protein structures: Estimation of static accessibility
inferredcites →https://doi.org/10.1016/j.cell.2018.06.026openalex-snapshot
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inferredcites →https://doi.org/10.1016/j.celrep.2014.01.003openalex-snapshot
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inferredcites →https://doi.org/10.1016/j.celrep.2015.09.007openalex-snapshot
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inferredcites →https://doi.org/10.1016/j.immuni.2016.08.014openalex-snapshot
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inferredcites →https://doi.org/10.1016/j.molcel.2013.05.022openalex-snapshot
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inferredcites →https://doi.org/10.1016/j.phrs.2009.07.006openalex-snapshot
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inferredcites →https://doi.org/10.1016/j.softx.2015.06.001openalex-snapshot
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