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PIN-FORMED (PIN) gene family in cultivated strawberry (Fragaria x ananassa): Genome-wide characterization and expression profiling under different abiotic stresses and hormonal treatments

https://doi.org/10.2139/ssrn.6986758
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Outgoing claims: the papers this work cites, builds on, or argues with.

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The papaya CpAUX1/LAX and CpPIN genes: structure, phylogeny and expression analysis related to root formation on in vitro plantlets
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Identification and expression analysis of PIN genes in rice
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Molecular and cellular aspects of auxin-transport-mediated development
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Origin and evolution of PIN auxin transporters in the green lineage
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Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing
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Lateral relocation of auxin efflux regulator PIN3 mediates tropism in Arabidopsis
inferredcites →https://doi.org/10.1038/nature03184openalex-snapshot
The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots
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The genome of woodland strawberry (Fragaria vesca)
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Auxin in action: signalling, transport and the control of plant growth and development
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Brassinosteroid signaling delimits root gravitropism via sorting of the Arabidopsis PIN2 auxin transporter
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Maternal auxin supply contributes to early embryo patterning in Arabidopsis
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A molecular rheostat adjusts auxin flux to promote root protophloem differentiation
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Structures and mechanism of the plant PIN-FORMED auxin transporter
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Origin and evolution of the octoploid strawberry genome
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Two cis‐ acting elements necessary and sufficient for gibberellin‐upregulated proteinase expression in rice seeds
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Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
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GSDS 2.0: an upgraded gene feature visualization server
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MapChart: Software for the Graphical Presentation of Linkage Maps and QTLs
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MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
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Expression of PIN Genes in Rice ( Oryza sativa L.): Tissue Specificity and Regulation by Hormones
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PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
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Pfam: The protein families database in 2021
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STRIDE: a web server for secondary structure assignment from known atomic coordinates of proteins
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Protein structure prediction and analysis using the Robetta server
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ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins
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The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools
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Phytozome: a comparative platform for green plant genomics
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GalaxyWEB server for protein structure prediction and refinement
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A PIN1 Family Gene, OsPIN1, involved in Auxin-dependent Adventitious Root Emergence and Tillering in Rice
inferredcites →https://doi.org/10.1093/pcp/pcz159openalex-snapshot
Functional Divergence of PIN1 Paralogous Genes in Rice
inferredcites →https://doi.org/10.1101/cshperspect.a001446openalex-snapshot
Cellular Responses to Auxin: Division versus Expansion
inferredcites →https://doi.org/10.1104/pp.110.156505openalex-snapshot
Differential Auxin-Transporting Activities of PIN-FORMED Proteins in Arabidopsis Root Hair Cells
inferredcites →https://doi.org/10.1104/pp.15.00581openalex-snapshot
Populus euphratica APYRASE2 Enhances Cold Tolerance by Modulating Vesicular Trafficking and Extracellular ATP in Arabidopsis Plants
inferredcites →https://doi.org/10.1104/pp.15.01863openalex-snapshot
Auxin and Cellular Elongation
inferredcites →https://doi.org/10.1105/tpc.109.069906openalex-snapshot
Auxin Response inArabidopsisunder Cold Stress: Underlying Molecular Mechanisms
inferredcites →https://doi.org/10.1105/tpc.114.134874openalex-snapshot
PIN-Dependent Auxin Transport: Action, Regulation, and Evolution
inferredcites →https://doi.org/10.1111/j.1365-313x.2011.04895.xopenalex-snapshot
Evaluating auxin distribution in tomato ( Solanum lycopersicum ) through an analysis of the PIN and AUX/LAX gene families
inferredcites →https://doi.org/10.1126/science.1121356openalex-snapshot
Polar PIN Localization Directs Auxin Flow in Plants
inferredcites →https://doi.org/10.1139/gen-2016-0141openalex-snapshot
Genome-wide identification and evolution of the PIN-FORMED (PIN) gene family in Glycine max
inferredcites →https://doi.org/10.1139/gen-2017-0163openalex-snapshot
Genome-wide identification and expression analysis of the CaLAX and CaPIN gene families in pepper (Capsicum annuum L.) under various abiotic stresses and hormone treatments
inferredcites →https://doi.org/10.1146/annurev-arplant-042809-112308openalex-snapshot
Auxin Biosynthesis and Its Role in Plant Development
inferredcites →https://doi.org/10.1146/annurev-arplant-070122-030236openalex-snapshot
cis-Regulatory Elements in Plant Development, Adaptation, and Evolution
inferredcites →https://doi.org/10.1146/annurev.biophys.28.1.319openalex-snapshot
MEMBRANE PROTEIN FOLDING AND STABILITY: Physical Principles
inferredcites →https://doi.org/10.1186/s12864-015-2149-1openalex-snapshot
Genome-wide analysis and expression profiling of the PIN auxin transporter gene family in soybean (Glycine max)
inferredcites →https://doi.org/10.1186/s43141-020-00039-5openalex-snapshot
Double lysis: an integrative time-saving method yielding high-quality RNA from strawberry
inferredcites →https://doi.org/10.1242/jcs.159418openalex-snapshot
Auxin transporters and binding proteins at a glance
inferredcites →https://doi.org/10.1371/journal.pcbi.0020036openalex-snapshot
Practical Strategies for Discovering Regulatory DNA Sequence Motifs
inferredcites →https://doi.org/10.1371/journal.pone.0018055openalex-snapshot
Evolution of Exon-Intron Structure and Alternative Splicing
inferredcites →https://doi.org/10.1371/journal.pone.0236349openalex-snapshot
Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa
inferredcites →https://doi.org/10.3389/fpls.2022.1059559openalex-snapshot
Characterization and expression profiling of PIN auxin efflux transporters reveal their role in developmental and abiotic stress conditions in rice
inferredcites →https://doi.org/10.3390/horticulturae10020191openalex-snapshot
Genome-Wide Identification and Expression Analysis of SWEET Gene Family in Strawberry
inferredcites →https://doi.org/10.3390/ijms22147396openalex-snapshot
Genome-Wide Identification and Characterization of PIN-FORMED (PIN) Gene Family Reveals Role in Developmental and Various Stress Conditions in Triticum aestivum L.
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