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Identification of genetic determinants that promote biofilm growth under heterotrophic conditions in Cupriavidus necator using transposon enrichment

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Outgoing claims: the papers this work cites, builds on, or argues with.

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Investigation of the mesoscale structure and volumetric features of biofilms using optical coherence tomography
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Optical coherence tomography in biofilm research: A comprehensive review
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Controlling Biofilm Development Through Cyclic di-GMP Signaling
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Untersuchungen �ber Wachstum und Speicherstoffsynthese von Hydrogenomonas
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Methyl-accepting chemotaxis proteins: a core sensing element in prokaryotes and archaea
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Isolation of transposon mutants and characterization of genes involved in biofilm formation by Pseudomonas fluorescens TC222
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GepA, a GGDEF-EAL protein, regulates biofilm formation and swimming motility in Vibrio parahaemolyticus
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Enrichment of phosphate-accumulating organisms (PAOs) in a microfluidic model biofilm system by mimicking a typical aerobic granular sludge feast/famine regime
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A colony bank containing synthetic CoI EI hybrid plasmids representative of the entire E. coli genome
inferredcites →https://doi.org/10.1016/j.biotechadv.2023.108264openalex-snapshot
Cupriavidus necator as a platform for polyhydroxyalkanoate production: An overview of strains, metabolism, and modeling approaches
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The phosphodiesterase activity of the HmsP EAL domain is required for negative regulation of biofilm formation inYersinia pestis
inferredcites →https://doi.org/10.1016/j.jbc.2024.105659openalex-snapshot
The dual GGDEF/EAL domain enzyme PA0285 is a Pseudomonas species housekeeping phosphodiesterase regulating early attachment and biofilm architecture
inferredcites →https://doi.org/10.1016/j.micres.2022.127243openalex-snapshot
Transposon insertion sequencing analysis unveils novel genes involved in luxR expression and quorum sensing regulation in Vibrio alginolyticus
inferredcites →https://doi.org/10.1016/j.plasmid.2009.05.002openalex-snapshot
New yeast recombineering tools for bacteria
inferredcites →https://doi.org/10.1021/bp010129sopenalex-snapshot
Internal and External Mass Transfer in Biofilms Grown at Various Flow Velocities
inferredcites →https://doi.org/10.1038/191463a0openalex-snapshot
Formation and Utilization of Poly-β-Hydroxybutyric Acid by Knallgas Bacteria (Hydrogenomonas)
inferredcites →https://doi.org/10.1038/441300aopenalex-snapshot
The superficial life of microbes
inferredcites →https://doi.org/10.1038/nmeth.2019openalex-snapshot
Fiji: an open-source platform for biological-image analysis
inferredcites →https://doi.org/10.1038/nrmicro.2015.7openalex-snapshot
The design and analysis of transposon insertion sequencing experiments
inferredcites →https://doi.org/10.1038/nrmicro.2016.94openalex-snapshot
Biofilms: an emergent form of bacterial life
inferredcites →https://doi.org/10.1038/nrmicro3033openalex-snapshot
Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms
inferredcites →https://doi.org/10.1038/s41598-019-45414-6openalex-snapshot
Machine-assisted cultivation and analysis of biofilms
inferredcites →https://doi.org/10.1039/c8mt00097bopenalex-snapshot
Toward a mechanistic understanding of Feo-mediated ferrous iron uptake
inferredcites →https://doi.org/10.1042/bsr20160046openalex-snapshot
Structural model of FeoB, the iron transporter fromPseudomonas aeruginosa, predicts a cysteine lined, GTP-gated pore
inferredcites →https://doi.org/10.1073/pnas.0507170102openalex-snapshot
A chemosensory system that regulates biofilm formation through modulation of cyclic diguanylate levels
inferredcites →https://doi.org/10.1073/pnas.0710525105openalex-snapshot
Shewanella secretes flavins that mediate extracellular electron transfer
inferredcites →https://doi.org/10.1073/pnas.0803281105openalex-snapshot
A defined transposon mutant library and its use in identifying motility genes in Vibrio cholerae
inferredcites →https://doi.org/10.1080/1040841x.2016.1192578openalex-snapshot
Overlapping riboflavin supply pathways in bacteria
inferredcites →https://doi.org/10.1080/21505594.2017.1420451openalex-snapshot
Pneumonia infection in mice reveals the involvement of the feoA gene in the pathogenesis of Acinetobacter baumannii
inferredcites →https://doi.org/10.1094/mpmi-11-13-0338-ropenalex-snapshot
Sinorhizobium meliloti Flavin Secretion and Bacteria-Host Interaction: Role of the Bifunctional RibBA Protein
inferredcites →https://doi.org/10.1105/tpc.11.12.2283openalex-snapshot
T-DNA as an Insertional Mutagen in Arabidopsis
inferredcites →https://doi.org/10.1111/j.1365-2958.2010.07131.xopenalex-snapshot
A regulatory RNA required for antitermination of biofilm and capsular polysaccharide operons in Bacillales
inferredcites →https://doi.org/10.1111/mmi.12013openalex-snapshot
Surface sensing and lateral subcellular localization of WspA , the receptor in a chemosensory‐like system leading to c‐di‐ GMP production
inferredcites →https://doi.org/10.1128/iai.00156-10openalex-snapshot
Genome-Wide Transposon Mutagenesis Reveals a Role for pO157 Genes in Biofilm Development in Escherichia coli O157:H7 EDL933
inferredcites →https://doi.org/10.1128/iai.00418-13openalex-snapshot
Pseudomonas aeruginosa Uses Multiple Pathways To Acquire Iron during Chronic Infection in Cystic Fibrosis Lungs
inferredcites →https://doi.org/10.1128/iai.00446-09openalex-snapshot
CdpA Is a Burkholderia pseudomallei Cyclic di-GMP Phosphodiesterase Involved in Autoaggregation, Flagellum Synthesis, Motility, Biofilm Formation, Cell Invasion, and Cytotoxicity
inferredcites →https://doi.org/10.1128/iai.69.1.435-445.2001openalex-snapshot
Characterization of Vibrio cholerae O1 El Tor galU and galE Mutants: Influence on Lipopolysaccharide Structure, Colonization, and Biofilm Formation
inferredcites →https://doi.org/10.1128/jb.00107-07openalex-snapshot
Spatial Patterns of DNA Replication, Protein Synthesis, and Oxygen Concentration within Bacterial Biofilms Reveal Diverse Physiological States
inferredcites →https://doi.org/10.1128/jb.00209-10openalex-snapshot
Identification and Characterization of a Phosphodiesterase That Inversely Regulates Motility and Biofilm Formation in Vibrio cholerae
inferredcites →https://doi.org/10.1128/jb.00396-11openalex-snapshot
Phenazine-1-Carboxylic Acid Promotes Bacterial Biofilm Development via Ferrous Iron Acquisition
inferredcites →https://doi.org/10.1128/jb.00434-18openalex-snapshot
PA5339, a RidA Homolog, Is Required for Full Growth in Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1128/jb.00586-07openalex-snapshot
BifA, a Cyclic-Di-GMP Phosphodiesterase, Inversely Regulates Biofilm Formation and Swarming Motility byPseudomonas aeruginosaPA14
inferredcites →https://doi.org/10.1128/jb.00642-08openalex-snapshot
The Transcriptional Factors MurR and Catabolite Activator Protein Regulate N -Acetylmuramic Acid Catabolism in Escherichia coli
inferredcites →https://doi.org/10.1128/jb.185.5.1485-1491.2003openalex-snapshot
Diffusion in Biofilms
inferredcites →https://doi.org/10.1128/jb.185.7.2374-2378.2003openalex-snapshot
Biofilm Formation by Hyperpiliated Mutants of Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1128/jb.186.5.1304-1310.2004openalex-snapshot
In Vivo Effect of NusB and NusG on rRNA Transcription Antitermination
inferredcites →https://doi.org/10.1128/mbio.00557-13openalex-snapshot
Ferrous Iron Is a Significant Component of Bioavailable Iron in Cystic Fibrosis Airways
inferredcites →https://doi.org/10.1128/mbio.01071-22openalex-snapshot
The Cysteine Desulfurase IscS Is a Significant Target of 2-Aminoacrylate Damage in Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1146/annurev-chembioeng-100522-110939openalex-snapshot
Biofilms for Production of Chemicals and Energy
inferredcites →https://doi.org/10.1186/s12866-014-0301-8openalex-snapshot
SinR is a mutational target for fine-tuning biofilm formation in laboratory-evolved strains of Bacillus subtilis
inferredcites →https://doi.org/10.1186/s12934-025-02643-xopenalex-snapshot
Physiology-informed use of Cupriavidus necator in biomanufacturing: a review of advances and challenges
inferredcites →https://doi.org/10.1186/s13068-019-1512-xopenalex-snapshot
Efficient biochemical production of acetoin from carbon dioxide using Cupriavidus necator H16
inferredcites →https://doi.org/10.1186/s13068-021-01981-3openalex-snapshot
Extracellular riboflavin induces anaerobic biofilm formation in Shewanella oneidensis
inferredcites →https://doi.org/10.1186/s13068-024-02549-7openalex-snapshot
Strain and model development for auto- and heterotrophic 2,3-butanediol production using Cupriavidus necator H16
inferredcites →https://doi.org/10.3389/fmicb.2015.01253openalex-snapshot
On the Ancestral UDP-Glucose Pyrophosphorylase Activity of GalF from Escherichia coli
inferredcites →https://doi.org/10.3389/fmicb.2016.01578openalex-snapshot
Genetic Identification of a PilT Motor in Geobacter sulfurreducens Reveals a Role for Pilus Retraction in Extracellular Electron Transfer
inferredcites →https://doi.org/10.3389/fmicb.2017.00904openalex-snapshot
Biofilm vs. Planktonic Lifestyle: Consequences for Pesticide 2,4-D Metabolism by Cupriavidus necator JMP134
inferredcites →https://doi.org/10.3389/fmicb.2022.1021021openalex-snapshot
BosR: A novel biofilm-specific regulator in Pseudomonas aeruginosa
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