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Recruitment phenology of Parilaternula certa across benthic and plankton observation windows: growth reconstruction and plankton-net metabarcoding

https://doi.org/10.2139/ssrn.7365865
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Multiple Alignment of DNA Sequences with MAFFT
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PASTA: Ultra-Large Multiple Sequence Alignment
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Oviposition, larval abundance, in situ larval growth and recruitment of the herbivorous gastropodLacuna vincta in kelp canopies in Barkley Sound, Vancouver Island (British Columbia)
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Mock samples resolve biases in diversity estimates and quantitative interpretation of zooplankton metabarcoding data
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COI metabarcoding better reveals the seasonal variations in the zooplankton community in the western Pacific Warm Pool
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Assessing sources of uncertainty in length-based estimates of body growth in populations of fishes and macroinvertebrates with bootstrapped ELEFAN
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Small-scale spatial variation of meiofaunal communities in Lima estuary (NW Portugal) assessed through metabarcoding
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Manila clams Ruditapes philippinarum spreading north and establishing in the European Wadden Sea
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A Chelex-100-based rapid DNA extraction method and its application in the detection of shrimp pathogens
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DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work
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Molecular phylogeny suggests polyphyly of both the turban shells (family Turbinidae) and the superfamily Trochoidea (Mollusca: Vetigastropoda)
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An experimental test of artifacts from repeated sampling in soft-sediments
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DADA2: High-resolution sample inference from Illumina amplicon data
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ModelFinder: fast model selection for accurate phylogenetic estimates
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GenBank is a reliable resource for 21st century biodiversity research
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Ecology and environmental impact of Musculista senhousia (Moilusca: Bivalvia: Mytilidae) in Tamaki Estuary, Auckland, New Zealand
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MRBAYES: Bayesian inference of phylogenetic trees
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Multiple alignment by aligning alignments
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Metabarcoding as a quantitative tool for estimating biodiversity and relative biomass of marine zooplankton
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Estimating growth from length frequency distribution: comparison of ELEFAN and Bayesian approaches for red endeavour prawns ( Metapenaeus ensis )
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FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
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IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
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UFBoot2: Improving the Ultrafast Bootstrap Approximation
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Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis
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A COMPARATIVE STUDY OF LACUNA VINCTA AND LACUNA PALLIDULA (GASTROPODA: PROSOBRANCHIA) IN LITTORAL ALGAL TURFS
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Metabarcoding of marine zooplankton: prospects, progress and pitfalls
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MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
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Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices
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Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
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TropFishR : an R package for fisheries analysis with length‐frequency data
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Taxon‐specific BLAST percent identity thresholds for identification of unknown sequences using metabarcoding
inferredcites →https://doi.org/10.1111/j.1365-2109.2004.01007.xopenalex-snapshot
The influence of body size, habitat and diet concentration on feeding of Laternula marilina Reeve
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Meta‐analysis shows both congruence and complementarity of DNA and eDNA metabarcoding to traditional methods for biological community assessment
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Rapid techniques for DNA extraction from routinely processed archival tissue for use in PCR.
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RECRUITMENT AND THE LOCAL DYNAMICS OF OPEN MARINE POPULATIONS
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POPULATION DYNAMICS OF FREE-SWIMMING STAGE PINNOTHERES BIDENTATUS (BRACHYURA: PINNOTHERIDAE) IN TIDAL WATERS OFF THE WEST COAST OF CENTRAL TAIWAN
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BLAST+: architecture and applications
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A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents
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Exploring the diversity and structural response of sediment-associated microbiota communities to environmental pollution at the siangshan wetland in Taiwan using environmental DNA metagenomic approach
inferredcites →https://doi.org/10.3391/mbi.2019.10.4.06openalex-snapshot
Metabarcoding on planktonic larval stages: an efficient approach for detecting and investigating life cycle dynamics of benthic aliens
inferredcites →https://doi.org/10.3897/mbmg.2.26869openalex-snapshot
A DNA metabarcoding protocol for hyporheic freshwater meiofauna: Evaluating highly degenerate COI primers and replication strategy
inferredcites →https://doi.org/10.5179/benthos1996.55.1_1openalex-snapshot
Long-Term Observations on Larval Recruitment Processes of Bivalve Assemblages on Temperate Tidal Flats
inferredcites →https://doi.org/10.7717/peerj.14616openalex-snapshot
Be positive: customized reference databases and new, local barcodes balance false taxonomic assignments in metabarcoding studies
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Evaluation of DNA barcoding reference databases for marine species in the western and central Pacific Ocean
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