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Lifting Hospital Electronic Health Record Data Treasures: Challenges and Opportunities

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Acute Respiratory Distress Syndrome
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Domain Shifts in Machine Learning Based Covid-19 Diagnosis From Blood Tests
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Benchmarking deep learning models on large healthcare datasets
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ISeeU: Visually interpretable deep learning for mortality prediction inside the ICU
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Controversies in acute kidney injury: conclusions from a Kidney Disease: Improving Global Outcomes (KDIGO) Conference
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Multiple instance learning with bag dissimilarities
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Array programming with NumPy
inferredcites →https://doi.org/10.1038/s41591-020-0789-4openalex-snapshot
Early prediction of circulatory failure in the intensive care unit using machine learning
inferredcites →https://doi.org/10.1038/s41597-019-0103-9openalex-snapshot
Multitask learning and benchmarking with clinical time series data
inferredcites →https://doi.org/10.1038/s41598-020-66925-7openalex-snapshot
Automated data cleaning of paediatric anthropometric data from longitudinal electronic health records: protocol and application to a large patient cohort
inferredcites →https://doi.org/10.1038/s41598-021-99015-3openalex-snapshot
Detection and analysis of COVID-19 in medical images using deep learning techniques
inferredcites →https://doi.org/10.1038/s41746-018-0029-1openalex-snapshot
Scalable and accurate deep learning with electronic health records
inferredcites →https://doi.org/10.1038/s41746-021-00518-0openalex-snapshot
Imputation of missing values for electronic health record laboratory data
inferredcites →https://doi.org/10.1038/sdata.2016.35openalex-snapshot
MIMIC-III, a freely accessible critical care database
inferredcites →https://doi.org/10.1038/sdata.2018.178openalex-snapshot
The eICU Collaborative Research Database, a freely available multi-center database for critical care research
inferredcites →https://doi.org/10.1093/jamia/ocaa139openalex-snapshot
Democratizing EHR analyses with FIDDLE: a flexible data-driven preprocessing pipeline for structured clinical data
inferredcites →https://doi.org/10.1093/jamia/ocv189openalex-snapshot
SMART on FHIR: a standards-based, interoperable apps platform for electronic health records
inferredcites →https://doi.org/10.1093/jamia/ocx084openalex-snapshot
The MIMIC Code Repository: enabling reproducibility in critical care research
inferredcites →https://doi.org/10.1093/labmed/lmaa111openalex-snapshot
Machine Learning Prediction of SARS-CoV-2 Polymerase Chain Reaction Results with Routine Blood Tests
inferredcites →https://doi.org/10.1097/aln.0000000000002300openalex-snapshot
Machine-learning Algorithm to Predict Hypotension Based on High-fidelity Arterial Pressure Waveform Analysis
inferredcites →https://doi.org/10.1097/ccm.0000000000004916openalex-snapshot
Sharing ICU Patient Data Responsibly Under the Society of Critical Care Medicine/European Society of Intensive Care Medicine Joint Data Science Collaboration: The Amsterdam University Medical Centers Database (AmsterdamUMCdb) Example*
inferredcites →https://doi.org/10.1109/jproc.2015.2501978openalex-snapshot
Machine Learning and Decision Support in Critical Care
inferredcites →https://doi.org/10.1109/tsp.2021.3087031openalex-snapshot
Change Point Detection in Time Series Data Using Autoencoders With a Time-Invariant Representation
inferredcites →https://doi.org/10.1145/1390156.1390294openalex-snapshot
Extracting and composing robust features with denoising autoencoders
inferredcites →https://doi.org/10.1145/3368555.3384469openalex-snapshot
MIMIC-Extract
inferredcites →https://doi.org/10.1145/3459930.3469536openalex-snapshot
COP-E-CAT
inferredcites →https://doi.org/10.1159/000477308openalex-snapshot
Heat Shock Protein A12B Protects Vascular Endothelial Cells Against Sepsis-Induced Acute Lung Injury in Mice
inferredcites →https://doi.org/10.1162/neco.1997.9.8.1735openalex-snapshot
Long Short-Term Memory
inferredcites →https://doi.org/10.1186/s12911-019-0740-0openalex-snapshot
A basic model for assessing primary health care electronic medical record data quality
inferredcites →https://doi.org/10.1186/s12911-021-01630-7openalex-snapshot
An automated data cleaning method for Electronic Health Records by incorporating clinical knowledge
inferredcites →https://doi.org/10.13026/07hj-2a80openalex-snapshot
MIMIC-IV
inferredcites →https://doi.org/10.1371/journal.pmed.1002701openalex-snapshot
Development and validation of machine learning models to identify high-risk surgical patients using automatically curated electronic health record data (Pythia): A retrospective, single-site study
inferredcites →https://doi.org/10.1609/aaai.v35i8.16826openalex-snapshot
TabNet: Attentive Interpretable Tabular Learning
inferredcites →https://doi.org/10.2174/1874431101812010019openalex-snapshot
A Review of Data Quality Assessment in Emergency Medical Services
inferredcites →https://doi.org/10.2196/13043openalex-snapshot
Health Care and Precision Medicine Research: Analysis of a Scalable Data Science Platform
inferredcites →https://doi.org/10.25080/majora-92bf1922-00aopenalex-snapshot
Data Structures for Statistical Computing in Python
inferredcites →https://doi.org/10.3390/healthcare10010085openalex-snapshot
Empirical Study on Classifiers for Earlier Prediction of COVID-19 Infection Cure and Death Rate in the Indian States
inferredcites →https://doi.org/10.3390/jpm11090893openalex-snapshot
COVID Mortality Prediction with Machine Learning Methods: A Systematic Review and Critical Appraisal
inferredcites →https://doi.org/10.4338/aci-2017-03-cr-0046openalex-snapshot
Barriers to Achieving Economies of Scale in Analysis of EHR Data
inferredcites →https://doi.org/10.5334/egems.218openalex-snapshot
A Data Quality Assessment Guideline for Electronic Health Record Data Reuse

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4777492openalex-extracted
Medifusionvec: A Knowledge Representation Learning Model for Semantic Representation of Medical Information Hierarchical Models
inferred← citeshttps://doi.org/10.1007/978-3-031-34107-6_5openalex-snapshot
CaTabRa: Efficient Analysis and Predictive Modeling of Tabular Data
inferred← citeshttps://doi.org/10.1016/j.bspc.2025.108204openalex-snapshot
Enhancing sleep disorder classification using machine learning and metaheuristic optimization techniques
inferred← citeshttps://doi.org/10.1016/j.ijmedinf.2025.106010openalex-snapshot
Improving personalized healthcare with automated longitudinal EHR analysis
inferred← citeshttps://doi.org/10.1016/j.jclinepi.2024.111656openalex-snapshot
From introducing Table 0 to forgetting Figure 1: it is time for a reporting guideline for publishing with real-world clinical data. Author's reply
inferred← citeshttps://doi.org/10.1016/j.jjimei.2025.100342openalex-snapshot
Healthcare data governance assessment based on hospital management perspectives
inferred← citeshttps://doi.org/10.1186/s12911-025-03020-9openalex-snapshot
Development and application of an early prediction model for risk of bloodstream infection based on real-world study
inferred← citeshttps://doi.org/10.1186/s12911-026-03361-zopenalex-snapshot
A machine learning model for the early prediction of Gram-negative bloodstream infection in ICU patients
inferred← citeshttps://doi.org/10.1371/journal.pdig.0000511openalex-snapshot
Using routinely collected clinical data for circadian medicine: A review of opportunities and challenges
inferred← citeshttps://doi.org/10.2196/42289openalex-snapshot
Data Provenance in Biomedical Research: Scoping Review
inferred← citeshttps://doi.org/10.2196/42971openalex-snapshot
The Evaluation of a Clinical Decision Support Tool Using Natural Language Processing to Screen Hospitalized Adults for Unhealthy Substance Use: Protocol for a Quasi-Experimental Design
inferred← citeshttps://doi.org/10.2196/52508openalex-snapshot
Consolidated Reporting Guidelines for Prognostic and Diagnostic Machine Learning Models (CREMLS)
inferred← citeshttps://doi.org/10.2196/73987openalex-snapshot
Challenges and Recommendations for Electronic Health Records Data Extraction and Preparation for Dynamic Prediction Modeling in Hospitalized Patients: Practical Guide and Tutorial
inferred← citeshttps://doi.org/10.2196/preprints.52508openalex-snapshot
Consolidated Reporting Guidelines for Prognostic and Diagnostic Machine Learning Models (CREMLS) (Preprint)
inferred← citeshttps://doi.org/10.3389/fdgth.2026.1747227openalex-snapshot
Extraction and processing of intensive care chart data from a patient data management system
inferred← citeshttps://doi.org/10.3389/fdgth.2026.1769337openalex-snapshot
Artificial intelligence approaches to predicting treatment non-adherence in chronic diseases: a narrative review
inferred← citeshttps://doi.org/10.34172/ijdrc.2024.e9openalex-snapshot
A Natural Language Processing Framework for Detecting Adverse Drug Reactions in Clinical Structured Drug Reviews
inferred← citeshttps://doi.org/10.4018/979-8-3373-6691-3.ch001openalex-snapshot
Classical Association Rule Mining Algorithms for Medical Data Analysis
inferred← citeshttps://doi.org/10.55813/gaea/rcym/v4/n1/126openalex-snapshot
Modelo de Inteligencia artificial para el diagnóstico del dengue
inferred← citeshttps://doi.org/10.7554/elife.103875openalex-snapshot
Understanding pain in women with polyendocrine metabolic ovarian syndrome: health risks and treatment effectiveness
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Understanding Pain in Polycystic Ovary Syndrome: Health Risks and Treatment Effectiveness
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lab: an R package for generating analysis-ready data from laboratory records
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