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The tortoise and the hare: choosing between noncoding plastome and nuclear Adh sequences for phylogeny reconstruction in a recently diverged plant group
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/j.1460-2075.1986.tb04464.xopenalex-snapshot
The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression
inferredcites →https://doi.org/10.1002/j.1537-2197.1992.tb13679.xopenalex-snapshot
VARIATION IN THE CHLOROPLAST GENES RPOC1 AND RPOC2 OF THE GENUS ASTRAGALUS (FABACEAE): EVIDENCE FROM RESTRICTION SITE MAPPING OF A PCR‐AMPLIFIED FRAGMENT
inferredcites →https://doi.org/10.1002/j.1537-2197.1992.tb13735.xopenalex-snapshot
GENETIC DIVERSITY AND ORIGIN OF THE HAWAIIAN ISLANDS COTTON, GOSSYPIUM TOMENTOSUM
inferredcites →https://doi.org/10.1002/j.1537-2197.1993.tb15332.xopenalex-snapshot
Molecular Evolution and Phylogenetic Implications of Internal Transcribed Spacer Sequences of Ribosomal DNA in Winteraceae
inferredcites →https://doi.org/10.1002/j.1537-2197.1994.tb15615.xopenalex-snapshot
Chloroplast DNA Systematics: A Review of Methods and Data Analysis
inferredcites →https://doi.org/10.1002/j.1537-2197.1996.tb12724.xopenalex-snapshot
Low Levels of Intraspecific Genetic Variation at a Rapidly Evolving Chloroplast DNA Locus in North American Duckweeds (Lemnaceae)
inferredcites →https://doi.org/10.1006/bojl.1996.0005openalex-snapshot
A phylogeny of the European gentians inferred from chloroplast trnL (UAA) intron sequences
inferredcites →https://doi.org/10.1006/mpev.1993.1006openalex-snapshot
Evolution of a Noncoding Region of the Chloroplast Genome
inferredcites →https://doi.org/10.1006/mpev.1993.1009openalex-snapshot
Relative Rates of Nucleotide Substitution in the Chloroplast Genome
inferredcites →https://doi.org/10.1006/mpev.1994.1004openalex-snapshot
Molecular Phylogeny of Families Related to Celastrales Based on rbcL 5′ Flanking Sequences
inferredcites →https://doi.org/10.1006/mpev.1995.1027openalex-snapshot
An Unusual Ribosomal DNA Sequence from Gossypium gossypioides Reveals Ancient, Cryptic, Intergenomic Introgression
inferredcites →https://doi.org/10.1006/mpev.1996.0042openalex-snapshot
Phylogenetic Use of Noncoding Regions in the GenusGentianaL.: ChloroplasttrnL (UAA) Intron versus Nuclear Ribosomal Internal Transcribed Spacer Sequences
inferredcites →https://doi.org/10.1006/mpev.1996.0053openalex-snapshot
Phylogenetic Analysis of Apiaceae Subfamily Apioideae Using Nucleotide Sequences from the ChloroplastrpoC1 Intron
inferredcites →https://doi.org/10.1006/mpev.1996.0380openalex-snapshot
Polyphyletism of Celastrales Deduced from a Chloroplast Noncoding DNA Region
inferredcites →https://doi.org/10.1006/mpev.1997.0432openalex-snapshot
Molecular Evolution and Phylogenetic Utility of the Chloroplastrpl16Intron inChusqueaand the Bambusoideae (Poaceae)
inferredcites →https://doi.org/10.1007/978-1-4020-6754-9_12413openalex-snapshot
PAUP (phylogenetic analysis using parsimony)
inferredcites →https://doi.org/10.1007/978-1-4615-5419-6openalex-snapshot
Molecular Systematics of Plants II
inferredcites →https://doi.org/10.1007/978-1-4615-5419-6_10openalex-snapshot
Phylogenetic Incongruence: Window into Genome History and Molecular Evolution
inferredcites →https://doi.org/10.1007/978-1-4615-5419-6_3openalex-snapshot
Comparative Utility of Chloroplast DNA Restriction Site and DNA Sequence Data for Phylogenetic Studies in Plants
inferredcites →https://doi.org/10.1007/978-3-0348-7527-1_23openalex-snapshot
Non-coding chloroplast DNA for plant molecular systematics at the infrageneric level
inferredcites →https://doi.org/10.1007/bf00019476openalex-snapshot
The alcohol dehydrogenase genes of cotton
inferredcites →https://doi.org/10.1007/bf00020456openalex-snapshot
Molecular evolution of duplicate copies of genes encoding cytosolic glutamine synthetase in Pisum sativum
inferredcites →https://doi.org/10.1007/bf00037152openalex-snapshot
Universal primers for amplification of three non-coding regions of chloroplast DNA
inferredcites →https://doi.org/10.1007/bf00161167openalex-snapshot
Relative rates of nucleotide substitution at the rbcl locus of monocotyledonous plants
inferredcites →https://doi.org/10.1007/bf00173172openalex-snapshot
Comparison of the evolution of ribulose-1, 5-biphosphate carboxylase (rbcL) and atpB-rbcL noncoding spacer sequences in a recent plant group, the tribe Rubieae (Rubiaceae)
inferredcites →https://doi.org/10.1007/bf00175877openalex-snapshot
The atpB and rbcL promoters in plastid DNAs of a wide dicot range
inferredcites →https://doi.org/10.1007/bf00222912openalex-snapshot
A single nuclear locus phylogeny of soybean based on DNA sequence
inferredcites →https://doi.org/10.1007/bf00226164openalex-snapshot
Allozyme evidence for the origin and diversification of Gossypium barbadense L.
inferredcites →https://doi.org/10.1007/bf00336789openalex-snapshot
A chloroplast DNA mutational hotspot and gene conversion in a noncoding region near rbcL in the grass family (Poaceae)
inferredcites →https://doi.org/10.1007/bf00351678openalex-snapshot
Molecular evolution of noncoding regions of the chloroplast genome in the Crassulaceae and related species
inferredcites →https://doi.org/10.1007/bf00710431openalex-snapshot
Glutaric aciduria mediated by gut bacteria
inferredcites →https://doi.org/10.1007/bf00985907openalex-snapshot
Genetic diversity in and phylogenetic relationships of the Brazilian endemic cotton,Gossypium mustelinum (Malvaceae)
inferredcites →https://doi.org/10.1007/bf02100204openalex-snapshot
Rates of synonymous substitution in plant nuclear genes
inferredcites →https://doi.org/10.1007/bf02338802openalex-snapshot
Polymorphism and concerted evolution in a tandemly repeated gene family: 5S ribosomal DNA in diploid and allopolyploid cottons
inferredcites →https://doi.org/10.1007/bf02344231openalex-snapshot
Molecular phylogeny and evolution of the AsianAconitum subgenusAconitum (Ranunculaceae)
inferredcites →https://doi.org/10.1007/bf02670470openalex-snapshot
A rapid method for extraction of cotton (Gossypium spp.) genomic DNA suitable for RFLP or PCR analysis
inferredcites →https://doi.org/10.1007/s00122-006-0273-7openalex-snapshot
Complete assignment of the chromosomes of Gossypium hirsutum L. by translocation and fluorescence in situ hybridization mapping
inferredcites →https://doi.org/10.1007/s002940050130openalex-snapshot
Hairpins create minute inversions in non-coding regions of chloroplast DNA
inferredcites →https://doi.org/10.1016/0003-2697(90)90595-zopenalex-snapshot
Molecular cloning: A laboratory manual
inferredcites →https://doi.org/10.1016/0076-6879(93)24035-sopenalex-snapshot
[34] Analysis of DNA sequence data: Phylogenetic inference
inferredcites →https://doi.org/10.1016/0305-1978(90)90123-wopenalex-snapshot
Allozyme diversity and introgression in the Galapagos Islands endemic Gossypium darwinii and its relationship to continental G. barbadense
inferredcites →https://doi.org/10.1016/b978-0-12-715007-9.50009-8openalex-snapshot
Plastid Chromosomes: Structure and Evolution
inferredcites →https://doi.org/10.1016/b978-1-4832-3211-9.50009-7openalex-snapshot
Evolution of Protein Molecules
inferredcites →https://doi.org/10.1016/s0065-2660(08)60515-5openalex-snapshot
Genetics, Cytology, and Evolution of Gossypium
inferredcites →https://doi.org/10.1017/cbo9780511623486openalex-snapshot
The Neutral Theory of Molecular Evolution
inferredcites →https://doi.org/10.1038/scientificamerican1179-98openalex-snapshot
The Neutral Theory of Molecular Evolution
inferredcites →https://doi.org/10.1046/j.1365-294x.1997.00180.xopenalex-snapshot
Species‐independent, geographical structuring of chloroplast DNA haplotypes in a montane herb Ipomopsis (Polemoniaceae)
inferredcites →https://doi.org/10.1046/j.1365-294x.1997.00220.xopenalex-snapshot
Nucleotide polymorphism in the chalcone synthase‐A locus and evolution of the chalcone synthase multigene family of common morning glory Ipomoea purpurea
inferredcites →https://doi.org/10.1073/pnas.81.12.3796openalex-snapshot
Evolution of multigene families under interchromosomal gene conversion.
inferredcites →https://doi.org/10.1073/pnas.84.24.9054openalex-snapshot
Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs.
inferredcites →https://doi.org/10.1073/pnas.86.11.4132openalex-snapshot
New World tetraploid cottons contain Old World cytoplasm
inferredcites →https://doi.org/10.1073/pnas.88.6.2060openalex-snapshot
Molecular evolution of alcohol dehydrogenase 1 in members of the grass family.
inferredcites →https://doi.org/10.1073/pnas.89.16.7844openalex-snapshot
Extensive variation in evolutionary rate of rbcL gene sequences among seed plants.
inferredcites →https://doi.org/10.1073/pnas.90.11.5095openalex-snapshot
Molecular evolution of the Adh1 locus in the genus Zea.
inferredcites →https://doi.org/10.1073/pnas.90.5.1997openalex-snapshot
Evolution of maize inferred from sequence diversity of an Adh2 gene segment from archaeological specimens.
inferredcites →https://doi.org/10.1073/pnas.91.11.5129openalex-snapshot
Columbines: a geographically widespread species flock.
inferredcites →https://doi.org/10.1073/pnas.91.15.6795openalex-snapshot
Rates and patterns of chloroplast DNA evolution.
inferredcites →https://doi.org/10.1073/pnas.92.1.280openalex-snapshot
Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium).
inferredcites →https://doi.org/10.1073/pnas.92.21.9717openalex-snapshot
Neighboring base composition and transversion/transition bias in a comparison of rice and maize chloroplast noncoding regions.
inferredcites →https://doi.org/10.1073/pnas.93.19.10274openalex-snapshot
Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL.
inferredcites →https://doi.org/10.1073/pnas.93.21.11735openalex-snapshot
Evolution of alcohol dehydrogenase genes in the palm and grass families.
inferredcites →https://doi.org/10.1073/pnas.93.21.11740openalex-snapshot
Island colonization and evolution of the insular woody habit in Echium L. (Boraginaceae).
inferredcites →https://doi.org/10.1080/106351598260879openalex-snapshot
Biogeography and Floral Evolution of Baobabs Adansonia, Bombacaceae as Inferred From Multiple Data Sets
inferredcites →https://doi.org/10.1086/417338openalex-snapshot
Ribosomal DNA: Molecular Evolution and Phylogenetic Inference
inferredcites →https://doi.org/10.1086/419073openalex-snapshot
Concerted Evolution of Repetitive DNA Sequences in Eukaryotes
inferredcites →https://doi.org/10.1093/genetics/117.3.543openalex-snapshot
Sequence-Dependent Gene Conversion: Can Duplicated Genes Diverge Fast Enough to Escape Conversion?
inferredcites →https://doi.org/10.1093/genetics/123.4.845openalex-snapshot
Molecular evolution of the small subunit of ribulose bisphosphate carboxylase: nucleotide substitution and gene conversion.
inferredcites →https://doi.org/10.1093/genetics/135.2.599openalex-snapshot
Simple methods for testing the molecular evolutionary clock hypothesis.
inferredcites →https://doi.org/10.1093/genetics/138.3.811openalex-snapshot
Haplotypic divergence coupled with lack of diversity at the Arabidopsis thaliana alcohol dehydrogenase locus: roles for both balancing and directional selection?
inferredcites →https://doi.org/10.1093/genetics/138.3.829openalex-snapshot
A detailed RFLP map of cotton, Gossypium hirsutum x Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome.
inferredcites →https://doi.org/10.1093/genetics/141.2.785openalex-snapshot
The molecular evolution of the small heat-shock proteins in plants.
inferredcites →https://doi.org/10.1093/genetics/143.3.1395openalex-snapshot
Evolution of Anthocyanin Biosynthesis in Maize Kernels: The Role of Regulatory and Enzymatic Loci
inferredcites →https://doi.org/10.1093/genetics/143.4.1761openalex-snapshot
Intragenic Recombination in the Adh Locws of the Wild Plant Arabidopsis thaliana
inferredcites →https://doi.org/10.1093/genetics/145.3.821openalex-snapshot
The Evolution of Ribosomal DNA Divergent Paralogues and Phylogenetic Implications
inferredcites →https://doi.org/10.1093/molbev/msab120openalex-snapshot
MEGA11: Molecular Evolutionary Genetics Analysis Version 11
inferredcites →https://doi.org/10.1093/nar/19.14.4008openalex-snapshot
‘Touchdown’ PCR to circumvent spurious priming during gene amplification
inferredcites →https://doi.org/10.1093/oxfordjournals.jhered.a023048openalex-snapshot
Plant Genetic Diversity and the Struggel to Measure Selection
inferredcites →https://doi.org/10.1093/oxfordjournals.jhered.a111190openalex-snapshot
Signal, Noise, and Reliability in Molecular Phylogenetic Analyses
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025603openalex-snapshot
Intra- and interspecific variation of the alcohol dehydrogenase locus region in wild plants Arabis gemmifera and Arabidopsis thaliana
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025621openalex-snapshot
Zea systematics: ribosomal ITS evidence
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025622openalex-snapshot
Zea ribosomal repeat evolution and substitution patterns
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025677openalex-snapshot
The phytochrome gene family in grasses (Poaceae): a phylogeny and evidence that grasses have a subset of the loci found in dicot angiosperms
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025685openalex-snapshot
Phylogeny and substitution rates of angiosperm actin genes
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025716openalex-snapshot
Evolution of alcohol dehydrogenase genes in peonies (Paeonia): phylogenetic relationships of putative nonhybrid species
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025781openalex-snapshot
Correlated rates of synonymous site evolution across plant genomes
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040084openalex-snapshot
Slipped-strand mispairing in a plastid gene: rpoC2 in grasses (Poaceae).
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040157openalex-snapshot
The use of chloroplast DNA to resolve plant phylogenies: noncoding versus rbcL sequences.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040410openalex-snapshot
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040442openalex-snapshot
Slipped-strand mispairing: a major mechanism for DNA sequence evolution.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040517openalex-snapshot
Relationships between gene trees and species trees.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040657openalex-snapshot
Evolution of Higher-Plant Glutamine Synthetase Genes: Tissue Specificity as a Criterion for Predicting Orthology
inferredcites →https://doi.org/10.1093/sysbio/41.1.4openalex-snapshot
Reconstruction of Organismal and Gene Phylogenies from Data on Multigene Families: Concerted Evolution, Homoplasy, and Confidence
inferredcites →https://doi.org/10.1093/sysbio/43.4.467openalex-snapshot
Combining Data in Phylogenetic Systematics: An Empirical Approach Using Three Molecular Data Sets in the Solanaceae
inferredcites →https://doi.org/10.1111/j.1558-5646.1988.tb02497.xopenalex-snapshot
THE LIMITS OF AMINO ACID SEQUENCE DATA IN ANGIOSPERM PHYLOGENETIC RECONSTRUCTION
inferredcites →https://doi.org/10.1111/j.1558-5646.1996.tb03638.xopenalex-snapshot
CHLOROPLAST DNA PHYLOGEOGRAPHY OF THE COMMON BEECH (FAGUS SYLVATICAL.) IN EUROPE
inferredcites →https://doi.org/10.1139/g96-020openalex-snapshot
Biased gene conversion is not occurring among rDNA repeats in theBrassicatriangle
inferredcites →https://doi.org/10.1139/g96-124openalex-snapshot
Analysis of a hotspot for deletion formation within the intron of the chloroplast trnI gene
inferredcites →https://doi.org/10.1139/g98-078openalex-snapshot
Simple methods for isolating homoeologous loci from allopolyploid genomes
inferredcites →https://doi.org/10.22244/rheedea.1992.02.02.04openalex-snapshot
A revised taxonomic interpretation of Gossypium L. (Malvaceae)
inferredcites →https://doi.org/10.2307/2399846openalex-snapshot
Phylogenetics of Seed Plants: An Analysis of Nucleotide Sequences from the Plastid Gene rbcL
inferredcites →https://doi.org/10.2307/2399892openalex-snapshot
Phylogeny of the Rubiaceae-Rubioideae, in Particular the Tribe Rubieae: Evidence from a Non-Coding Chloroplast DNA Sequence
inferredcites →https://doi.org/10.2307/2419069openalex-snapshot
Phylogenetics of the Cotton Genus (Gossypium): Character-State Weighted Parsimony Analysis of Chloroplast-DNA Restriction Site Data and Its Systematic and Biogeographic Implications
inferredcites →https://doi.org/10.2307/2419457openalex-snapshot
Congruence and Consensus in the Cotton Tribe (Malvaceae)
inferredcites →https://doi.org/10.2307/2419526openalex-snapshot
Androdioecy is Derived from Dioecy in Datiscaceae: Evidence from Restriction Site Mapping of PCR-Amplified Chloroplast DNA Fragments
inferredcites →https://doi.org/10.2307/2419665openalex-snapshot
Molecular Phylogenetic Analysis of the Hawaiian Endemics Schiedea and Alsinidendron (Caryophyllaceae)
inferredcites →https://doi.org/10.2307/2419717openalex-snapshot
Phylogenetic Analyses of Polemoniaceae Using Nucleotide Sequences of the Plastid Gene matK
inferredcites →https://doi.org/10.2307/2419743openalex-snapshot
Phylogenetic Relationships in Sarraceniaceae Based on rbcL and ITS Sequences
inferredcites →https://doi.org/10.2307/2446011openalex-snapshot
Chloroplast dna restriction site study of Verbesina (Asteraceae: Heliantheae)
inferredcites →https://doi.org/10.2307/2446031openalex-snapshot
Using restriction‐site variation of PCR‐amplified cpDNA genes for phylogenetic analysis of Tribe Cheloneae (Scrophulariaceae)
inferredcites →https://doi.org/10.2307/2446155openalex-snapshot
Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae)
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1002/tax.12424zenodo-depositor-declared
Molecular phylogenetics of Phyllanthus sensu lato (Phyllanthaceae): Towards coherent monophyletic taxa
inferred← citeshttps://doi.org/10.11646/phytotaxa.159.4.1zenodo-depositor-declared
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inferred← citeshttps://doi.org/10.11646/phytotaxa.257.3.3zenodo-depositor-declared
Navarretia crystallina and N. miwukensis (Polemoniaceae): new species endemic to California with affinity for soils derived from pyroclastic deposits
inferred← citeshttps://doi.org/10.11646/phytotaxa.265.3.1zenodo-depositor-declared
Re-establishment of Chamaecrista cultrifolia (Leguminosae, Caesalpinioideae) based on morphological and molecular analyses
inferred← citeshttps://doi.org/10.11646/phytotaxa.364.1.4zenodo-depositor-declared
Plastid phylogenomic study of grape species and its implications for evolutionary study and conservation of Vitis
inferred← citeshttps://doi.org/10.22244/rheedea.2024.34.03.01zenodo-depositor-declared
How to best utilise molecular data to support new taxa – a practical guide in less than 5000 words
inferred← citeshttps://doi.org/10.1002/aps3.11510openalex-snapshot
DNA release from plant tissue using focused ultrasound extraction (FUSE)
inferred← citeshttps://doi.org/10.1002/ece3.1449openalex-snapshot
Contrasting responses to Pleistocene climate changes: a case study of two sister species Allium cyathophorum and A. spicata (Amaryllidaceae) distributed in the eastern and western Qinghai–Tibet Plateau
inferred← citeshttps://doi.org/10.1002/ece3.2118openalex-snapshot
Contrasting genetic patterns between two coexisting Eleutherococcus species in northern China
inferred← citeshttps://doi.org/10.1002/ece3.71369openalex-snapshot
Unraveling the Genetic Diversity and Phylogeography of the “King of Vitamin C” Fruit (Rosa roxburghii Trattinnick) in Chinese Southwest
inferred← citeshttps://doi.org/10.1002/jsfa.7120openalex-snapshot
Comparative analysis of resistance gene analogues encoding NBS‐LRR domains in cotton
inferred← citeshttps://doi.org/10.1002/tax.12497openalex-snapshot
Divergence time estimation and mapping of morphological and cytogenetical data in the southern South American geophyte genus Pterocactus (Cactaceae)
inferred← citeshttps://doi.org/10.1002/tax.574014openalex-snapshot
Putative parentage of six Old World polyploids in Tragopogon L. (Asteraceae: Scorzonerinae) based on ITS, ETS, and plastid sequence data
inferred← citeshttps://doi.org/10.1002/tax.574021openalex-snapshot
DNA barcoding of a large genus, Aspalathus L. (Fabaceae)
inferred← citeshttps://doi.org/10.1006/mpev.1999.0750openalex-snapshot
Phylogeny, Duplication, and Intraspecific Variation of Adh Sequences in New World Diploid Cottons (Gossypium L., Malvaceae)
inferred← citeshttps://doi.org/10.1006/mpev.2001.0931openalex-snapshot
Phylogenetic Utility of the Glycerol-3-Phosphate Acyltransferase Gene: Evolution and Implications in Paeonia (Paeoniaceae)
inferred← citeshttps://doi.org/10.1006/mpev.2001.0953openalex-snapshot
Molecular Phylogenetics of the Sexually Deceptive Orchid Genus Ophrys (Orchidaceae) Based on Nuclear and Chloroplast DNA Sequences
inferred← citeshttps://doi.org/10.1006/mpev.2001.1064openalex-snapshot
Molecular Phylogeny of Hybridizing Species from the Genus Spartina Schreb. (Poaceae)
inferred← citeshttps://doi.org/10.1007/978-1-62703-767-9_5openalex-snapshot
Analysis of Variation in Chloroplast DNA Sequences
inferred← citeshttps://doi.org/10.1007/978-3-319-27096-8_4openalex-snapshot
Genetic Improvement of Cotton
inferred← citeshttps://doi.org/10.1007/978-94-011-4221-2_1openalex-snapshot
Evolution of genes and taxa: a primer
inferred← citeshttps://doi.org/10.1007/978-94-011-4221-2_12openalex-snapshot
Genome evolution in polyploids
inferred← citeshttps://doi.org/10.1007/978-981-13-2883-1_3openalex-snapshot
Glacial Refugia and the Postglacial Migration of Dominant Tree Species in Northern China
inferred← citeshttps://doi.org/10.1007/978-981-15-1636-8_48openalex-snapshot
DNA Barcode: The Genetic Blueprint for Identity and Diversity of Phyllanthus amarus Schum. et. Thonn
inferred← citeshttps://doi.org/10.1007/bf03030736openalex-snapshot
Reappraisal ofDiplolabellum coreanum (orchidaceae) as inferred from molecular data
inferred← citeshttps://doi.org/10.1007/s00114-008-0424-6openalex-snapshot
Phylogenetic relationships among morphotypes of Caesalpinia echinata Lam. (Caesalpinioideae: Leguminosae) evidenced by trnL intron sequences
inferred← citeshttps://doi.org/10.1007/s00122-003-1512-9openalex-snapshot
Comparative analysis of chloroplast DNA variability in wild and cultivated Citrullus species
inferred← citeshttps://doi.org/10.1007/s00122-004-1842-2openalex-snapshot
Domestication patterns in common bean (Phaseolus vulgaris L.) and the origin of the Mesoamerican and Andean cultivated races
inferred← citeshttps://doi.org/10.1007/s00122-004-1850-2openalex-snapshot
Genetic diversity and geographic pattern in early South American cotton domestication
inferred← citeshttps://doi.org/10.1007/s00122-007-0505-5openalex-snapshot
The Horn of Africa as a centre of barley diversification and a potential domestication site
inferred← citeshttps://doi.org/10.1007/s00122-008-0732-4openalex-snapshot
Cotton (Gossypium spp.) R2R3-MYB transcription factors SNP identification, phylogenomic characterization, chromosome localization, and linkage mapping
inferred← citeshttps://doi.org/10.1007/s00122-009-1014-5openalex-snapshot
Interaction of novel Dobzhansky–Muller type genes for the induction of hybrid lethality between Gossypium hirsutum and G. barbadense cv. Coastland R4-4
inferred← citeshttps://doi.org/10.1007/s00122-010-1367-9openalex-snapshot
Phylogenetic inferences in Avena based on analysis of FL intron2 sequences
inferred← citeshttps://doi.org/10.1007/s001220051537openalex-snapshot
Sequence variation of non-coding regions of chloroplast DNA of soybean and related wild species and its implications for the evolution of different chloroplast haplotypes
inferred← citeshttps://doi.org/10.1007/s001220100741openalex-snapshot
PCR-mediated recombination in amplification products derived from polyploid cotton
inferred← citeshttps://doi.org/10.1007/s001220200007openalex-snapshot
Evaluating the potential of SSR flanking regions for examining taxonomic relationships in the Vitaceae
inferred← citeshttps://doi.org/10.1007/s00239-003-2540-4openalex-snapshot
Causes of Size Homoplasy Among Chloroplast Microsatellites in Closely Related Clusia Species
inferred← citeshttps://doi.org/10.1007/s002390010143openalex-snapshot
A Survey of the Molecular Evolutionary Dynamics of Twenty-Five Multigene Families from Four Grass Taxa
inferred← citeshttps://doi.org/10.1007/s00294-016-0612-4openalex-snapshot
Complete chloroplast genome sequence of a major economic species, Ziziphus jujuba (Rhamnaceae)
inferred← citeshttps://doi.org/10.1007/s00414-019-02142-wopenalex-snapshot
Characterization of new chloroplast markers to determine biogeographical origin and crop type of Cannabis sativa
inferred← citeshttps://doi.org/10.1007/s00414-021-02518-xopenalex-snapshot
Evaluation of the trnK-matK-trnK, ycf3, and accD-psal chloroplast regions to differentiate crop type and biogeographical origin of Cannabis sativa
inferred← citeshttps://doi.org/10.1007/s00438-007-0270-9openalex-snapshot
Transcriptome profiling, sequence characterization, and SNP-based chromosomal assignment of the EXPANSIN genes in cotton
inferred← citeshttps://doi.org/10.1007/s00606-003-0045-7openalex-snapshot
Relationships among pansies ( Viola section Melanium ) investigated using ITS and ISSR markers
inferred← citeshttps://doi.org/10.1007/s00606-003-0114-yopenalex-snapshot
A molecular phylogeny of the genus Gagea (Liliaceae) in Germany inferred from non-coding chloroplast and nuclear DNA sequences
inferred← citeshttps://doi.org/10.1007/s00606-004-0173-8openalex-snapshot
Origin and phylogeny of Oryza species with the CD genome based on multiple-gene sequence data
inferred← citeshttps://doi.org/10.1007/s00606-004-0294-0openalex-snapshot
Phylogeny of the New World diploid cottons (Gossypium L., Malvaceae) based on sequences of three low-copy nuclear genes
inferred← citeshttps://doi.org/10.1007/s00606-005-0313-9openalex-snapshot
Phylogeny of the complex Vanguerieae (Rubiaceae) genera Fadogia, Rytigynia, and Vangueria with close relatives and a new circumscription of Vangueria
inferred← citeshttps://doi.org/10.1007/s00606-005-0367-8openalex-snapshot
Phylogeny of Rhododendron section Vireya (Ericaceae) based on two non-coding regions of cpDNA
inferred← citeshttps://doi.org/10.1007/s00606-006-0474-1openalex-snapshot
Phylogenetic relationships among Japanese flowering cherries (Prunus subgenus Cerasus) based on nucleotide sequences of chloroplast DNA
inferred← citeshttps://doi.org/10.1007/s00606-007-0571-9openalex-snapshot
Sorghum resolved as a distinct genus based on combined ITS1, ndhF and Adh1 analyses
inferred← citeshttps://doi.org/10.1007/s00606-008-0031-1openalex-snapshot
Non-coding nuclear DNA markers in phylogenetic reconstruction
inferred← citeshttps://doi.org/10.1007/s00606-009-0210-8openalex-snapshot
Mutational dynamics and phylogenetic utility of noncoding chloroplast DNA
inferred← citeshttps://doi.org/10.1007/s00606-011-0529-9openalex-snapshot
The Iberian endemic species Ranunculus cabrerensis Rothm.: an intricate history in the Ranunculus parnassiifolius L. polyploid complex
inferred← citeshttps://doi.org/10.1007/s00606-013-0861-3openalex-snapshot
Taxonomic status and phylogeny of Veratrum section Veratrum (Melanthiaceae) in Korea and Japan based on chloroplast and nuclear sequence data
inferred← citeshttps://doi.org/10.1007/s00606-016-1383-6openalex-snapshot
Regional-scale differentiation and phylogeography of a desert plant Allium mongolicum (Liliaceae) inferred from chloroplast DNA sequence variation
inferred← citeshttps://doi.org/10.1007/s00606-017-1411-1openalex-snapshot
Nucleotide diversity in the two co-resident genomes of allopolyploid cotton
inferred← citeshttps://doi.org/10.1007/s10265-004-0151-9openalex-snapshot
Phylogenetic analysis of Asian Symplocos (Symplocaceae) based on nuclear and chloroplast DNA sequences
inferred← citeshttps://doi.org/10.1007/s10265-006-0010-yopenalex-snapshot
Intraspecific sequence variation of chloroplast DNA among the component species of deciduous broad-leaved forests in Japan
inferred← citeshttps://doi.org/10.1007/s10265-007-0083-2openalex-snapshot
Chloroplast DNA phylogeography of Pedicularis ser. Gloriosae (Orobanchaceae) in Japan
inferred← citeshttps://doi.org/10.1007/s10265-009-0218-8openalex-snapshot
Phylogeny of Litsea and related genera (Laureae-Lauraceae) based on analysis of rpb2 gene sequences
inferred← citeshttps://doi.org/10.1007/s10592-005-4977-zopenalex-snapshot
Implications of molecular systematic analyses on the conservation of rare and threatened taxa: Contrasting examples from Malvaceae
inferred← citeshttps://doi.org/10.1007/s10592-006-9131-zopenalex-snapshot
History, genetic differentiation and conservation strategies for disjunct populations of Sibiraea species from Southeastern Europe and Asia
inferred← citeshttps://doi.org/10.1007/s10592-011-0281-2openalex-snapshot
Genetic structure of the endangered Leucomeris decora (Asteraceae) in China inferred from chloroplast and nuclear DNA markers
inferred← citeshttps://doi.org/10.1007/s10592-017-0991-1openalex-snapshot
High genetic diversity in an endangered medicinal plant, Saussurea involucrata (Saussurea, Asteraceae), in western Tianshan Mountains, China
inferred← citeshttps://doi.org/10.1007/s10709-015-9867-9openalex-snapshot
Microsatellite-based genetic diversity patterns in disjunct populations of a rare orchid
inferred← citeshttps://doi.org/10.1007/s10722-004-6115-zopenalex-snapshot
Identification of AFLP Markers that Discriminate Between Cultivated Cotton and the Hawaiian Island Endemic, Gossypium tomentosumNuttall ex Seeman
inferred← citeshttps://doi.org/10.1007/s10722-006-9107-3openalex-snapshot
Diversity and origin of cultivated and citron type watermelon (Citrullus lanatus)
inferred← citeshttps://doi.org/10.1007/s10722-006-9170-9openalex-snapshot
A wide range of genetic diversity in pear (Pyrus ussuriensis var. aromatica) genetic resources from Iwate, Japan revealed by SSR and chloroplast DNA markers
inferred← citeshttps://doi.org/10.1007/s10722-011-9692-7openalex-snapshot
Genome-wide analysis of plastome sequence variation and development of plastidial CAPS markers in common potato and related Solanum species
inferred← citeshttps://doi.org/10.1007/s10722-021-01189-2openalex-snapshot
Distinct phylogeographic structures and evolutionary histories of wild medicinal Salvia miltiorrhiza Bunge plant populations in the mountains of Central China
inferred← citeshttps://doi.org/10.1007/s10750-017-3409-7openalex-snapshot
Chloroplast phylogeography of a widely distributed mangrove species, Excoecaria agallocha, in the Indo-West Pacific region
inferred← citeshttps://doi.org/10.1007/s11103-007-9183-6openalex-snapshot
Molecular evolution and genome divergence at RPB2 gene of the St and H genome in Elymus species
inferred← citeshttps://doi.org/10.1007/s11295-006-0036-2openalex-snapshot
Phylogeny of Castanea (Fagaceae) based on chloroplast trnT-L-F sequence data
inferred← citeshttps://doi.org/10.1007/s11295-006-0078-5openalex-snapshot
Molecular phylogeny of Juglans (Juglandaceae): a biogeographic perspective
inferred← citeshttps://doi.org/10.1007/s11295-011-0442-yopenalex-snapshot
Phylogenetic utility of structural alterations found in the chloroplast genome of pear: hypervariable regions in a highly conserved genome
inferred← citeshttps://doi.org/10.1007/s11295-012-0564-xopenalex-snapshot
Genetic structure and phylogeography of Pyrus pashia L. (Rosaceae) in Yunnan Province, China, revealed by chloroplast DNA analyses
inferred← citeshttps://doi.org/10.1007/s11295-013-0601-4openalex-snapshot
Complex origin of Trinitario-type Theobroma cacao (Malvaceae) from Trinidad and Tobago revealed using plastid genomics
inferred← citeshttps://doi.org/10.1007/s11295-013-0681-1openalex-snapshot
Pyrosequencing of the northern red oak (Quercus rubra L.) chloroplast genome reveals high quality polymorphisms for population management
inferred← citeshttps://doi.org/10.1007/s11295-014-0718-0openalex-snapshot
Chloroplast DNA-based genetic diversity and phylogeography of Pyrus betulaefolia (Rosaceae) in Northern China
inferred← citeshttps://doi.org/10.1007/s11295-016-0970-6openalex-snapshot
Complete chloroplast genome sequences of Eucommia ulmoides: genome structure and evolution
inferred← citeshttps://doi.org/10.1007/s11295-016-1048-1openalex-snapshot
Conservation genetics of rare trees restricted to subtropical montane cloud forests in southern China: a case study from Quercus arbutifolia (Fagaceae)
inferred← citeshttps://doi.org/10.1007/s11295-016-1096-6openalex-snapshot
Genetic structure of dioecious and trioecious Salix myrsinifolia populations at the border of geographic range
inferred← citeshttps://doi.org/10.1007/s11295-017-1126-zopenalex-snapshot
Study on chloroplast DNA diversity of cultivated and wild pears (Pyrus L.) in Northern China
inferred← citeshttps://doi.org/10.1007/s12042-012-9111-zopenalex-snapshot
Analysis of Starch Gene Diversity in the Wild Relatives of Oryza sativa
inferred← citeshttps://doi.org/10.1007/s12686-009-9121-9openalex-snapshot
Chloroplast microsatellite markers for the Neotropical orchid genus Epidendrum, and cross-amplification in other Laeliinae species (Orchidaceae)
inferred← citeshttps://doi.org/10.1016/b0-12-227620-5/90009-0openalex-snapshot
Appendix 2. Selection of Refereed Papers
inferred← citeshttps://doi.org/10.1016/b978-0-12-374380-0.50014-2openalex-snapshot
Plant Molecular Systematics
inferred← citeshttps://doi.org/10.1016/b978-0-12-812628-8.50014-6openalex-snapshot
Plant Molecular Systematics
inferred← citeshttps://doi.org/10.1016/b978-012301463-4/50009-7openalex-snapshot
Polyploidy in Plants
inferred← citeshttps://doi.org/10.1016/j.aquabot.2004.08.005openalex-snapshot
Molecular phylogeny of Japanese Potamogeton species in light of noncoding chloroplast sequences
inferred← citeshttps://doi.org/10.1016/j.aquabot.2021.103484openalex-snapshot
Hybrid origin of the invasive Spartina anglica inferred from chloroplast and nuclear ITS phylogenies
inferred← citeshttps://doi.org/10.1016/j.bse.2009.04.011openalex-snapshot
Phylogenetic analysis of questionable tetraploid species in Roegneria and Pseudoroegneria (Poaceae: Triticeae) inferred from a gene encoding plastid acety1-CoA carboxylase
inferred← citeshttps://doi.org/10.1016/j.bse.2010.06.011openalex-snapshot
Molecular evolution of chloroplast DNA in fig (Ficus carica L.): Footprints of sweep selection and recent expansion
inferred← citeshttps://doi.org/10.1016/j.bse.2012.06.027openalex-snapshot
Genetic diversity and population structure of Pyrus calleryana (Rosaceae) in Zhejiang province, China
inferred← citeshttps://doi.org/10.1016/j.bse.2016.02.001openalex-snapshot
Intra and interspecific sequence variation in closely related species of Cereus (CACTACEAE)
inferred← citeshttps://doi.org/10.1016/j.bse.2016.06.001openalex-snapshot
Intraspecific classification of Ficus deltoidea Jack subsp. deltoidea (Moraceae) in Peninsular Malaysia based on morphological and molecular variations
inferred← citeshttps://doi.org/10.1016/j.bse.2016.10.003openalex-snapshot
Phylogenetic relationships among species of Tamarix (Tamaricaceae) in China
inferred← citeshttps://doi.org/10.1016/j.hpj.2021.01.002openalex-snapshot
Chloroplast DNA-based genetic variation of Rosa roxburghii in Southwest China: Phylogeography and conservation implications
inferred← citeshttps://doi.org/10.1016/j.jnc.2021.126004openalex-snapshot
Genetic conservation strategies of endemic plants from edaphic habitat islands: The case of Jacobaea auricula (Asteraceae)
inferred← citeshttps://doi.org/10.1016/j.plantsci.2008.12.007openalex-snapshot
EST-SSR sequences revealed the relationship of D-genome in diploid and tetraploid Species in Gossypium
inferred← citeshttps://doi.org/10.1016/j.pld.2021.09.004openalex-snapshot
Multiple lines of evidence supports the two varieties of Halenia elliptica (Gentianaceae) as two species
inferred← citeshttps://doi.org/10.1016/j.pld.2023.03.012openalex-snapshot
Plastid phylogenomics and species discrimination in the “Chinese” clade of Roscoea (Zingiberaceae)
inferred← citeshttps://doi.org/10.1016/j.sajb.2013.06.012openalex-snapshot
The promise of genomics for a “next generation” of advances in higher-level legume molecular systematics
inferred← citeshttps://doi.org/10.1016/j.sajb.2022.05.057openalex-snapshot
Pollinator shifts and the evolution of floral advertising traits in the genus Ferraria (Iridaceae)
inferred← citeshttps://doi.org/10.1016/j.scienta.2008.02.001openalex-snapshot
Phylogenetic analysis in some Diospyros spp. (Ebenaceae) and Japanese persimmon using chloroplast DNA PCR-RFLP markers
inferred← citeshttps://doi.org/10.1016/j.ympev.2003.10.009openalex-snapshot
Phylogeny of Panax using chloroplast trnC–trnD intergenic region and the utility of trnC–trnD in interspecific studies of plants
inferred← citeshttps://doi.org/10.1016/j.ympev.2004.05.006openalex-snapshot
Viburnum phylogeny: evidence from the duplicated nuclear gene GBSSI
inferred← citeshttps://doi.org/10.1016/j.ympev.2004.08.002openalex-snapshot
Heterogeneous evolution of the Myc-like Anthocyanin regulatory gene and its phylogenetic utility in Cornus L. (Cornaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2004.08.005openalex-snapshot
Phylogenetic analysis of the nuclear alcohol dehydrogenase (Adh) gene family in Carex section Acrocystis (Cyperaceae) and combined analyses of Adh and nuclear ribosomal ITS and ETS sequences for inferring species relationships
inferred← citeshttps://doi.org/10.1016/j.ympev.2004.12.005openalex-snapshot
Phylogeny of Eleusine (Poaceae: Chloridoideae) based on nuclear ITS and plastid trnT–trnF sequences
inferred← citeshttps://doi.org/10.1016/j.ympev.2005.03.004openalex-snapshot
Utility of NADP-dependent isocitrate dehydrogenase for species-level evolutionary inference in angiosperm phylogeny: A case study in Saltugilia
inferred← citeshttps://doi.org/10.1016/j.ympev.2005.11.016openalex-snapshot
The impact of intragenic recombination on phylogenetic reconstruction at the sectional level in Eucalyptus when using a single copy nuclear gene (cinnamoyl CoA reductase)
inferred← citeshttps://doi.org/10.1016/j.ympev.2006.06.011openalex-snapshot
Further insights into the phylogeny of Arabidopsis (Brassicaceae) from nuclear Atmyb2 flanking sequence
inferred← citeshttps://doi.org/10.1016/j.ympev.2006.06.017openalex-snapshot
Phylogenetic utility of rapidly evolving DNA at high taxonomical levels: Contrasting matK, trnT-F, and rbcL in basal angiosperms
inferred← citeshttps://doi.org/10.1016/j.ympev.2007.01.002openalex-snapshot
Circumscription and phylogeny of Apiaceae subfamily Saniculoideae based on chloroplast DNA sequences
inferred← citeshttps://doi.org/10.1016/j.ympev.2007.10.006openalex-snapshot
Incorporating gaps as phylogenetic characters across eight DNA regions: Ramifications for North American Psoraleeae (Leguminosae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2007.12.024openalex-snapshot
Molecular phylogeny of RPB2 gene reveals multiple origin, geographic differentiation of H genome, and the relationship of the Y genome to other genomes in Elymus species
inferred← citeshttps://doi.org/10.1016/j.ympev.2008.01.004openalex-snapshot
Phylogeny of Hopea (Dipterocarpaceae) inferred from chloroplast DNA and nuclear PgiC sequences
inferred← citeshttps://doi.org/10.1016/j.ympev.2008.02.001openalex-snapshot
Reticulate evolution in Thuja inferred from multiple gene sequences: Implications for the study of biogeographical disjunction between eastern Asia and North America
inferred← citeshttps://doi.org/10.1016/j.ympev.2008.04.004openalex-snapshot
A species-level phylogenetic study of the Verbena complex (Verbenaceae) indicates two independent intergeneric chloroplast transfers
inferred← citeshttps://doi.org/10.1016/j.ympev.2008.05.017openalex-snapshot
Phylogenetic utility of 141 low-copy nuclear regions in taxa at different taxonomic levels in two distantly related families of rosids
inferred← citeshttps://doi.org/10.1016/j.ympev.2008.07.015openalex-snapshot
Phylogenetic patterns in the genus Manihot (Euphorbiaceae) inferred from analyses of nuclear and chloroplast DNA regions
inferred← citeshttps://doi.org/10.1016/j.ympev.2008.12.024openalex-snapshot
Tracking the evolutionary history of polyploidy in Fragaria L. (strawberry): New insights from phylogenetic analyses of low-copy nuclear genes
inferred← citeshttps://doi.org/10.1016/j.ympev.2010.01.018openalex-snapshot
A classification of the Chloridoideae (Poaceae) based on multi-gene phylogenetic trees.
inferred← citeshttps://doi.org/10.1016/j.ympev.2010.03.041openalex-snapshot
Large multi-locus plastid phylogeny of the tribe Arundinarieae (Poaceae: Bambusoideae) reveals ten major lineages and low rate of molecular divergence
inferred← citeshttps://doi.org/10.1016/j.ympev.2011.04.017openalex-snapshot
Isolation, phylogeny and evolution of the SymRK gene in the legume genus Lupinus L.
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.01.009openalex-snapshot
Phylogenetic insights into the correlates of dioecy in meadow-rues (Thalictrum, Ranunculaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.01.023openalex-snapshot
Extreme habitats that emerged in the Pleistocene triggered divergence of weedy Youngia (Asteraceae) in Taiwan
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.01.025openalex-snapshot
Molecular evolution and phylogenetic analysis of genes related to cotton fibers development from wild and domesticated cotton species in Gossypium
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.02.032openalex-snapshot
Arnica (Asteraceae) phylogeny revisited using RPB2: Complex patterns and multiple d-paralogues
inferred← citeshttps://doi.org/10.1016/j.ympev.2013.03.025openalex-snapshot
Comparative phylogeography of the Smilax hispida group (Smilacaceae) in eastern Asia and North America – Implications for allopatric speciation, causes of diversity disparity, and origins of temperate elements in Mexico
inferred← citeshttps://doi.org/10.1016/j.ympev.2014.07.009openalex-snapshot
Phylogeny and evolutionary histories of Pyrus L. revealed by phylogenetic trees and networks based on data from multiple DNA sequences
inferred← citeshttps://doi.org/10.1016/j.ympev.2014.09.030openalex-snapshot
Molecular phylogenetics of tribe Eudemeae (Brassicaceae) and implications for its morphology and distribution
inferred← citeshttps://doi.org/10.1016/j.ympev.2014.12.010openalex-snapshot
Intercontinental long-distance dispersal of Canellaceae from the New to the Old World revealed by a nuclear single copy gene and chloroplast loci
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.05.014openalex-snapshot
Evolution of the beta-amylase gene in the temperate grasses: Non-purifying selection, recombination, semiparalogy, homeology and phylogenetic signal
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.05.023openalex-snapshot
Re-evaluating the phylogeny of allopolyploid Gossypium L.
inferred← citeshttps://doi.org/10.1016/j.ympev.2016.02.024openalex-snapshot
The quest to resolve recent radiations: Plastid phylogenomics of extinct and endangered Hawaiian endemic mints (Lamiaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2016.10.001openalex-snapshot
Resolving incongruence: Species of hybrid origin in Columnea (Gesneriaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2017.05.014openalex-snapshot
Recalcitrant deep and shallow nodes in Aristolochia (Aristolochiaceae) illuminated using anchored hybrid enrichment
inferred← citeshttps://doi.org/10.1016/j.ympev.2017.10.006openalex-snapshot
Rampant polyphyly in the Arracacia clade (Apiaceae) and an assessment of the phylogenetic utility of 20 noncoding plastid loci
inferred← citeshttps://doi.org/10.1016/j.ympev.2019.02.011openalex-snapshot
Molecular phylogenetics and species delimitation in annual species of Hydrocotyle (Araliaceae) from South Western Australia
inferred← citeshttps://doi.org/10.1016/j.ympev.2019.02.015openalex-snapshot
Evolutionary history of the Pasque-flowers (Pulsatilla, Ranunculaceae): Molecular phylogenetics, systematics and rDNA evolution
inferred← citeshttps://doi.org/10.1016/j.ympev.2019.05.001openalex-snapshot
Nuclear and plastid DNA phylogeny of tribe Cardueae (Compositae) with Hyb-Seq data: A new subtribal classification and a temporal diversification framework
inferred← citeshttps://doi.org/10.1016/j.ympev.2024.108234openalex-snapshot
Phylogenetic origin of dioecious Callicarpa (Lamiaceae) species endemic to the Ogasawara Islands revealed by chloroplast and nuclear whole genome analyses
inferred← citeshttps://doi.org/10.1016/j.ympev.2025.108385openalex-snapshot
Phylogeny and evolutionary history of alpine alkali grasses (Poaceae: Puccinellia) within the subtribe Coleanthinae
inferred← citeshttps://doi.org/10.1016/s0065-2113(02)78004-8openalex-snapshot
Polyploidy and the evolutionary history of cotton
inferred← citeshttps://doi.org/10.1016/s0065-2296(08)00005-0openalex-snapshot
Bamboo Taxonomy and Diversity in the Era of Molecular Markers
inferred← citeshttps://doi.org/10.1016/s0169-5347(01)02366-7openalex-snapshot
Do humans create deserts?
inferred← citeshttps://doi.org/10.1016/s0169-5347(01)02378-3openalex-snapshot
Inference of reticulation in outcrossing allopolyploid taxa: caveats, likelihood and perspectives
inferred← citeshttps://doi.org/10.1016/s0304-4238(01)00358-2openalex-snapshot
Defining the sources of Paradox: DNA sequence markers for North American walnut (Juglans L.) species and hybrids
inferred← citeshttps://doi.org/10.1016/s0367-2530(17)30029-4openalex-snapshot
Molecular fingerprinting evidence (ISSR, Inter-Simple Sequence Repeats) for a wild status of Olea europaea L. (Oleaceae) in the Eurosiberian North of the Iberian Peninsula
inferred← citeshttps://doi.org/10.1016/s1055-7903(03)00093-9openalex-snapshot
Phylogenetic utility of the second intron of LEAFY in Neillia and Stephanandra (Rosaceae) and implications for the origin of Stephanandra
inferred← citeshttps://doi.org/10.1016/s1055-7903(03)00208-2openalex-snapshot
Ribosomal ITS sequences and plant phylogenetic inference
inferred← citeshttps://doi.org/10.1016/s1055-7903(03)00249-5openalex-snapshot
Phylogenetic relationships of the sweetpotato in Ipomoea series Batatas (Convolvulaceae) based on nuclear β-amylase gene sequences
inferred← citeshttps://doi.org/10.1016/s1055-7903(03)00276-8openalex-snapshot
Infrageneric phylogenies: a comparison of chloroplast-expressed glutamine synthetase, cytosol-expressed glutamine synthetase and cpDNA maturase K in Passiflora
inferred← citeshttps://doi.org/10.1017/cbo9780511844270.006openalex-snapshot
Origins and evolution of Galapagos endemic vascular plants
inferred← citeshttps://doi.org/10.1017/s1477200006002131openalex-snapshot
Phylogenetic relationships in Southern African chloridoid grasses (Poaceae) based on nuclear and chloroplast sequence data
inferred← citeshttps://doi.org/10.1023/a:1006349518932openalex-snapshot
Evolution of genes and taxa: a primer
inferred← citeshttps://doi.org/10.1023/a:1006392424384openalex-snapshot
Genome evolution in polyploids
inferred← citeshttps://doi.org/10.1023/a:1022051100610openalex-snapshot
Evolution and expression of MYB genes in diploid and polyploid cotton
inferred← citeshttps://doi.org/10.1038/hdy.2011.111openalex-snapshot
Types, levels and patterns of low-copy DNA sequence divergence, and phylogenetic implications, for Gossypium genome types
inferred← citeshttps://doi.org/10.1038/s41598-017-02076-6openalex-snapshot
The complete chloroplast genome sequence of tung tree (Vernicia fordii): Organization and phylogenetic relationships with other angiosperms
inferred← citeshttps://doi.org/10.1043/0363-6445-26.4.757openalex-snapshot
Origin of North American Elymus (Poaceae: Triticeae) Allotetraploids Based on Granule-bound Starch Synthase Gene Sequences
inferred← citeshttps://doi.org/10.1043/0363-6445-27.2.408openalex-snapshot
Molecular Phylogeny and Infrageneric Classification of Actinidia (Actinidiaceae)
inferred← citeshttps://doi.org/10.1043/0363-6445-27.3.522openalex-snapshot
Is the genus Cissus (Vitaceae) monophyletic? Evidence from plastid and nuclear ribosomal DNA
inferred← citeshttps://doi.org/10.1043/0363-6445-27.4.654openalex-snapshot
Low Intralineage Divergence in Ceratozamia (Zamiaceae) Detected with Nuclear Ribosomal DNA ITS and Chloroplast DNA trnL-F Non-coding Region
inferred← citeshttps://doi.org/10.1043/06-80.1openalex-snapshot
A Molecular Phylogenetic Study of Arnica (Asteraceae): Low Chloroplast DNA Variation and Problematic Subgeneric Classification
inferred← citeshttps://doi.org/10.1046/j.0962-1083.2001.01399.xopenalex-snapshot
Phylogeography of Kandelia candel in East Asiatic mangroves based on nucleotide variation of chloroplast and mitochondrial DNAs
inferred← citeshttps://doi.org/10.1046/j.1095-8312.2003.00210.xopenalex-snapshot
Out of Africa: molecular phylogenetics and biogeography of Wolffiella (Lemnaceae)
inferred← citeshttps://doi.org/10.1046/j.1420-9101.2003.00577.xopenalex-snapshot
Noncoding plastid trnT-trnF sequences reveal a well resolved phylogeny of basal angiosperms
inferred← citeshttps://doi.org/10.1046/j.1469-8137.2003.00837.xopenalex-snapshot
Evolutionary dynamics of nickel hyperaccumulation in Alyssum revealed by its nrDNA analysis
inferred← citeshttps://doi.org/10.1046/j.1469-8137.2003.00948.xopenalex-snapshot
Advances in the study of polyploidy sincePlant speciation
inferred← citeshttps://doi.org/10.1046/j.1525-142x.2001.00079.xopenalex-snapshot
Comparative development of fiber in wild and cultivated cotton
inferred← citeshttps://doi.org/10.1071/sb03015openalex-snapshot
Use of nuclear genes for phylogeny reconstruction in plants
inferred← citeshttps://doi.org/10.1071/sb11005openalex-snapshot
Phylogeny and proposed circumscription of Breynia, Sauropus and Synostemon (Phyllanthaceae), based on chloroplast and nuclear DNA sequences
inferred← citeshttps://doi.org/10.1071/sb12009openalex-snapshot
Morphological and molecular evidence supports the recognition of a new subspecies of the critically endangered Pityrodia scabra (Lamiaceae)
inferred← citeshttps://doi.org/10.1071/sb15046openalex-snapshot
Schoenus (Cyperaceae) is not monophyletic based on ITS nrDNA sequence data
inferred← citeshttps://doi.org/10.1073/pnas.061288698openalex-snapshot
Speciation through homoploid hybridization between allotetraploids in peonies ( Paeonia )
inferred← citeshttps://doi.org/10.1073/pnas.0802368105openalex-snapshot
Phylogenetic escalation and decline of plant defense strategies
inferred← citeshttps://doi.org/10.1073/pnas.242415399openalex-snapshot
Allopolyploidization and evolution of species with reduced floral structures in Lepidium L. (Brassicaceae)
inferred← citeshttps://doi.org/10.1073/pnas.96.25.14400openalex-snapshot
Phylogeny of rice genomes with emphasis on origins of allotetraploid species
inferred← citeshttps://doi.org/10.1073/pnas.96.25.14406openalex-snapshot
Duplicated genes evolve independently after polyploid formation in cotton
inferred← citeshttps://doi.org/10.1080/00837792.2015.1004845openalex-snapshot
Taxonomic reappraisal of Monostromataceae (Ulvophyceae: Chlorophyta) based on multi-locus phylogeny
inferred← citeshttps://doi.org/10.1080/10409230290771474openalex-snapshot
Utility of Low-Copy Nuclear Gene Sequences in Plant Phylogenetics
inferred← citeshttps://doi.org/10.1080/10635150590945359openalex-snapshot
Placing Paleopolyploidy in Relation to Taxon Divergence: A Phylogenetic Analysis in Legumes Using 39 Gene Families
inferred← citeshttps://doi.org/10.1080/11263504.2020.1845847openalex-snapshot
A littoral grass growing inland: genetic diversity of Puccinellia fasciculata around mud volcanoes in Italy
inferred← citeshttps://doi.org/10.1080/13102818.2014.928980openalex-snapshot
Genetic relationship in mulberry (MorusL.) inferred through PCR–RFLP andtrnD-trnT sequence data of chloroplast DNA
inferred← citeshttps://doi.org/10.1080/14620316.2007.11512246openalex-snapshot
Chloroplast DNA variation in the genusCamelliawith reference to the origin of ‘Tamanoura’
inferred← citeshttps://doi.org/10.1080/14772000.2015.1023867openalex-snapshot
Genome evolution in a Mediterranean species complex: phylogeny and cytogenetics ofHelictotrichon(Poaceae) allopolyploids based on nuclear DNA sequences (rDNA, topoisomerase gene) and FISH
inferred← citeshttps://doi.org/10.1080/14772000.2018.1473898openalex-snapshot
Evolutionary trends in the columnar cactus genus Eulychnia (Cactaceae) based on molecular phylogenetics, morphology, distribution, and habitat
inferred← citeshttps://doi.org/10.1080/17550874.2012.745909openalex-snapshot
Making next-generation sequencing work for you: approaches and practical considerations for marker development and phylogenetics
inferred← citeshttps://doi.org/10.1086/317583openalex-snapshot
Microstructural Changes in Noncoding Chloroplast DNA: Interpretation, Evolution, and Utility of Indels and Inversions in Basal Angiosperm Phylogenetic Inference
inferred← citeshttps://doi.org/10.1086/323444openalex-snapshot
Phylogenetic Relationships in Primula L. and Related Genera (Primulaceae) Based on Noncoding Chloroplast DNA
inferred← citeshttps://doi.org/10.1086/375423openalex-snapshot
Evolution of Hedera (the Ivy Genus, Araliaceae): Insights from Chloroplast DNA Data
inferred← citeshttps://doi.org/10.1086/528758openalex-snapshot
Phylogeny of Conradina and Related Southeastern Scrub Mints (Lamiaceae) Based on GapC Gene Sequences
inferred← citeshttps://doi.org/10.1086/597267openalex-snapshot
Phylogeny of the Australian Camphorosmeae (Chenopodiaceae) and the Taxonomic Significance of the Fruiting Perianth
inferred← citeshttps://doi.org/10.1086/600082openalex-snapshot
A Statistical Approach for Distinguishing Hybridization and Incomplete Lineage Sorting
inferred← citeshttps://doi.org/10.1086/605116openalex-snapshot
Evolutionary Relationships inEphedra(Gnetales), with Implications for Seed Plant Phylogeny
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