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Reconstructing patterns of reticulate evolution in angiosperms: what can we do?

https://doi.org/10.2307/25065417
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IRIS NELSONII (IRIDACEAE): ORIGIN AND GENETIC COMPOSITION OF A HOMOPLOID HYBRID SPECIES
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Late Glacial and Holocene vegetation history in the southern part of Transylvania (Romania): pollen analysis of two sequences from Avrig
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An Unusual Ribosomal DNA Sequence from Gossypium gossypioides Reveals Ancient, Cryptic, Intergenomic Introgression
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RIATA-HGT: A Fast and Accurate Heuristic for Reconstructing Horizontal Gene Transfer
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NeighborNet: An Agglomerative Method for the Construction of Planar Phylogenetic Networks
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Phylogenetic Incongruence: Window into Genome History and Molecular Evolution
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Consensus Networks: A Method for Visualising Incompatibilities in Collections of Trees
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The potential of AFLPs in biosystematics: A first application inSolanum taxonomy(Solanaceae)
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A second spontaneous hybrid in the genusLeucaena (Leguminosae, Mimosoideae)
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Natural hybridization between an outcrossing and a selfingPhlox (Polemoniaceae): The maternal species of F1 hybrids
inferredcites →https://doi.org/10.1007/pl00013996openalex-snapshot
Experimental Hybridization Reveals Biased Inheritance of the Internal Transcribed Spacer of the Nuclear Ribosomal DNA in Begonia ×taipeiensis
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Geographical patterns of genetic variation in the world collections of wild annual Cicer characterized by amplified fragment length polymorphisms
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The Effect of Recombination on the Accuracy of Phylogeny Estimation
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Physical mapping of rDNA sites in possible diploid progenitors of polyploid Festuca species
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A molecular phylogeny of the genus Gagea (Liliaceae) in Germany inferred from non-coding chloroplast and nuclear DNA sequences
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Molecular evidence of hybridisation between the endemic Phoenix canariensis and the widespread P. dactylifera with Random Amplified Polymorphic DNA (RAPD) markers
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Phylogenetics of Miscanthus , Saccharum and related genera (Saccharinae, Andropogoneae, Poaceae) based on DNA sequences from ITS nuclear ribosomal DNA and plastid trnL intron and trnL-F intergenic spacers
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Comparison of phylogenetic trees
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Split decomposition: A new and useful approach to phylogenetic analysis of distance data
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Hybridization and adaptive radiation
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Hybridization as an invasion of the genome
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Efficiencies of maximum likelihood methods of phylogenetic inferences when different substitution models are used
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Viburnum phylogeny: evidence from the duplicated nuclear gene GBSSI
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Phylogenetic relationships and evolutionary traits in Ranunculus s.l. (Ranunculaceae) inferred from ITS sequence analysis
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Molecular criteria for determining new hybrid species—An application to the Sonneratia hybrids
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Intraspecific gene genealogies: trees grafting into networks
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The genetic diversity of Scaevola plumieri (Goodeniaceae), an indigenous dune coloniser, as revealed by Inter Simple Sequence Repeat (ISSR) fingerprinting
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Additive polymorphisms and reticulation in an ITS phylogeny of thrifts (Armeria, Plumbaginaceae)
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Phylogenetic utility of the second intron of LEAFY in Neillia and Stephanandra (Rosaceae) and implications for the origin of Stephanandra
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Nuclear ribosomal DNA sequence polymorphism and hybridization in checker mallows (Sidalcea, Malvaceae)
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Isolation and Genetic Study of Erwinia Mutants Devoid of Common Components of the Phosphoenolpyruvate-Dependent Phosphotransferase System
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Genomics and Genosystematics
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Allozyme variation in Louisiana irises: a test for introgression and hybrid speciation
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Phylogeny and Biogeography of Erythronium (Liliaceae) Inferred from Chloroplast matK and Nuclear rDNA ITS Sequences
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Paraphyly of Tarasa (Malvaceae) and Diverse Origins of the Polyploid Species
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Hybrid Origin and Parentage of Dendrochilum acuiferum (Orchidaceae) Inferred in a Phylogenetic Context Using Nuclear and Plastid DNA Sequence Data
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Morphological and Molecular Analysis of Putative Hybrid Speciation in Ceanothus (Rhamnaceae)
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Molecular evidence for the hybrid origin of a new endemic species of Stylosanthes Sw. (Fabaceae) from the Mexican Yucatán Peninsula
inferredcites →https://doi.org/10.1046/j.1095-8339.2003.00147.xopenalex-snapshot
Genome organization in diploid hybrid species of Argyranthemum (Asteraceae) in the Canary Islands
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TCS: a computer program to estimate gene genealogies
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The role of hybridization in evolution
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Hybrid status of kuwini, Mangifera odorata Griff. (Anacardiaceae) verified by amplified fragment length polymorphism
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The phylogeography of dusky dolphins ( Lagenorhynchus obscurus ): a critical examination of network methods and rooting procedures
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Candidate gene polymorphisms associated with salt tolerance in wild sunflower hybrids: implications for the origin ofHelianthus paradoxus, a diploid hybrid species
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Hybridization, polyploidy and speciation inSpartina(Poaceae)
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Advances in the study of polyploidy sincePlant speciation
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Diploid and polyploid reticulate evolution throughout the history of the perennial soybeans (GlycinesubgenusGlycine)
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Genetic Diversity and Tests of the Hybrid Origin of the Endangered Yellow Larkspur
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Speciation and Species Separation in Hordeum L. (Poaceae) Resolved by Discontinuous Molecular Markers1
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From Dampier to DNA: the 300-year-old mystery of the identity and proposed allopolyploid origin of Conostylis stylidioides (Haemodoraceae)
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Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics
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Evaluation of methods for detecting recombination from DNA sequences: Computer simulations
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Pollen-mediated introgression and hybrid speciation in Louisiana irises.
inferredcites →https://doi.org/10.1073/pnas.92.1.280openalex-snapshot
Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium).
inferredcites →https://doi.org/10.1073/pnas.92.15.6813openalex-snapshot
Documentation of reticulate evolution in peonies (Paeonia) using internal transcribed spacer sequences of nuclear ribosomal DNA: implications for biogeography and concerted evolution.
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Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution.
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Distribution of spontaneous plant hybrids.
inferredcites →https://doi.org/10.1073/pnas.93.20.10864openalex-snapshot
Accurate reconstruction of a known HIV-1 transmission history by phylogenetic tree analysis.
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The role of genetic and genomic attributes in the success of polyploids
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What Can Molecular and Morphological Markers Tell Us About Plant Hybridization?
inferredcites →https://doi.org/10.1080/07352689309701903openalex-snapshot
Molecular Data and the Dynamic Nature of Polyploidy
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Misleading Results from the Use of Ambiguity Coding to Score Polymorphisms in Higher-Level Taxa
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Increased Taxon Sampling Greatly Reduces Phylogenetic Error
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Reticulate Evolution, Introgression, and Intertribal Gene Capture in an Allohexaploid Grass
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Visualizing Conflicting Evolutionary Hypotheses in Large Collections of Trees: Using Consensus Networks to Study the Origins of Placentals and Hexapods
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Coding Polymorphism for Phylogeny Reconstruction
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What Can Molecular and Morphological Markers Tells Us About Plant Hybridization?
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From a Phylogenetic Tree to a Reticulated Network
inferredcites →https://doi.org/10.1093/aob/mcg087openalex-snapshot
Molecular Systematics, GISH and the Origin of Hybrid Taxa in Nicotiana (Solanaceae)
inferredcites →https://doi.org/10.1093/aob/mch073openalex-snapshot
Comparative ITS and AFLP Analysis of Diploid Cardamine (Brassicaceae) Taxa from Closely Related Polyploid Complexes
inferredcites →https://doi.org/10.1093/aob/mch151openalex-snapshot
Genome Size Variation in Central European Species of Cirsium (Compositae) and their Natural Hybrids
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Genetic Relationships among Hylocereus and Selenicereus Vine Cacti (Cactaceae): Evidence from Hybridization and Cytological Studies
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Phylogeographic Inferences Concerning Evolution of Brazilian Passiflora actinia and P. elegans (Passifloraceae) Based on ITS (nrDNA) Variation
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T-REX: reconstructing and visualizing phylogenetic trees and reticulation networks
inferredcites →https://doi.org/10.1093/bioinformatics/bth155openalex-snapshot
TOPALi: software for automatic identification of recombinant sequences within DNA multiple alignments
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A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation.
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Using allele frequencies and geographic subdivision to reconstruct gene trees within a species: molecular variance parsimony.
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Mitochondrial portraits of human populations using median networks.
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The Ecological Genetics of Homoploid Hybrid Speciation
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Comparison of Bayesian and Maximum Likelihood Bootstrap Measures of Phylogenetic Reliability
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Multiple Hybrid Formation in Natural Populations: Concerted Evolution of the Internal Transcribed Spacer of Nuclear Ribosomal DNA (ITS) in North American Arabis divaricarpa (Brassicaceae)
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Neighbor-Net: An Agglomerative Method for the Construction of Phylogenetic Networks
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Nonuniform Concerted Evolution and Chloroplast Capture: Heterogeneity of Observed Introgression Patterns in Three Molecular Data Partition Phylogenies of Asian Mitella (Saxifragaceae)
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Comparison of the Accuracies of Several Phylogenetic Methods Using Protein and DNA Sequences
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Hybrids and Hybrid Zones: Historical Perspective
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Natural Hybridization and Evolution
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Evaluation of Methods for Detecting Recombination from DNA Sequences: Empirical Data
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Persistent nuclear ribosomal DNA sequence polymorphism in the Amelanchier agamic complex (Rosaceae)
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026036openalex-snapshot
Median-joining networks for inferring intraspecific phylogenies
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Gene Trees in Species Trees
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MOLECULAR PHYLOGEOGRAPHY, RETICULATION, AND LINEAGE SORTING IN MEDITERRANEAN SENECIO SECT. SENECIO (ASTERACEAE)
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CRYPTIC REPEATED GENOMIC RECOMBINATION DURING SPECIATION IN GOSSYPIUM GOSSYPIOIDES
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The genus Rosa (Rosoideae, Rosaceae) revisited: molecular analysis of nrITS-1 and atpB-rbcL intergenic spacer (IGS) versus conventional taxonomy
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Molecular signals for Late Tertiary/Early Quaternary range splits of an Eurasian steppe plant: Clausia aprica (Brassicaceae)
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Barrier to gene flow between two ecologically divergent Populus species, P. alba (white poplar) and P. tremula (European aspen): the role of ecology and life history in gene introgression
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Hybrid speciation in plants: new insights from molecular studies
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HYBRIDS AND PHYLOGENETIC SYSTEMATICS I. PATTERNS OF CHARACTER EXPRESSION IN HYBRIDS AND THEIR IMPLICATIONS FOR CLADISTIC ANALYSIS
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MOLECULAR EVIDENCE FOR HOMOPLOID RETICULATE EVOLUTION AMONG AUSTRALIAN SPECIES OF GOSSYPIUM
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HYBRIDS AND PHYLOGENETIC SYSTEMATICS II. THE IMPACT OF HYBRIDS ON CLADISTIC ANALYSIS
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Major Ecological Transitions in Wild Sunflowers Facilitated by Hybridization
inferredcites →https://doi.org/10.1126/science.272.5262.741openalex-snapshot
Role of Gene Interactions in Hybrid Speciation: Evidence from Ancient and Experimental Hybrids
inferredcites →https://doi.org/10.1139/b04-012openalex-snapshot
Phylogeny ofBrayaandNeotorularia(Brassicaceae) based on nuclear ribosomal internal transcribed spacer and chloroplasttrnL intron sequences
inferredcites →https://doi.org/10.1142/9789812776303_0030openalex-snapshot
TOWARDS THE DEVELOPMENT OF COMPUTATIONAL TOOLS FOR EVALUATING PHYLOGENETIC NETWORK RECONSTRUCTION METHODS
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Hybrid Origins of Plant Species
inferredcites →https://doi.org/10.1146/annurev.ecolsys.29.1.467openalex-snapshot
PATHWAYS, MECHANISMS, AND RATES OF POLYPLOID FORMATION IN FLOWERING PLANTS
inferredcites →https://doi.org/10.1146/annurev.genet.34.1.401openalex-snapshot
POLYPLOID INCIDENCE AND EVOLUTION
inferredcites →https://doi.org/10.1146/annurev.genet.36.040202.111115openalex-snapshot
Recombination in Evolutionary Genomics
inferredcites →https://doi.org/10.1266/ggs.78.139openalex-snapshot
Topological incongruence between nuclear and chloroplast DNA trees suggesting hybridization in the urophyllum group of the genus Fagopyrum (Polygonaceae)
inferredcites →https://doi.org/10.1534/genetics.103.015693openalex-snapshot
Significance Tests and Weighted Values for AFLP Similarities, Based on Arabidopsis in Silico AFLP Fragment Length Distributions
inferredcites →https://doi.org/10.1534/genetics.166.2.987openalex-snapshot
Multiple Origins and nrDNA Internal Transcribed Spacer Homeologue Evolution in theGlycine tomentella(Leguminosae) Allopolyploid Complex
inferredcites →https://doi.org/10.1600/0363644042451017openalex-snapshot
The Evolution of North American Elymus (Triticeae, Poaceae) Allotetraploids: Evidence from Phosphoenolpyruvate Carboxylase Gene Sequences
inferredcites →https://doi.org/10.1600/0363644042451080openalex-snapshot
On the Origin of the Tetraploid Species Hordeum capense and H. secalinum (Poaceae)
inferredcites →https://doi.org/10.1600/036364404772973988openalex-snapshot
Phylogeny of Pleione (Orchidaceae) and Parentage Analysis of its Wild Hybrids Based on Plastid and Nuclear Ribosomal ITS Sequences and Morphological Data
inferredcites →https://doi.org/10.1600/036364404772974095openalex-snapshot
Viburnum Phylogeny Based on Chloroplast trnK Intron and Nuclear Ribosomal ITS DNA Sequences
inferredcites →https://doi.org/10.1600/036364404774195539openalex-snapshot
Using Phylogeny Reconstruction to Test Hypotheses of Hybrid Origin in Delphinium Section Diedropetala (Ranunculaceae)
inferredcites →https://doi.org/10.1600/0363644053661823openalex-snapshot
Phylogeny, Species Delimitation, and Recombination in Sphagnum Section Acutifolia
inferredcites →https://doi.org/10.1600/0363644053661977openalex-snapshot
Phylogenetic Relationships within Zaluzianskya (Scrophulariaceae s. s., tribe Manuleeae): Classification Based on DNA Sequences from Multiple Genomes and Implications for Character Evolution and Biogeography
inferredcites →https://doi.org/10.2135/cropsci1998.0011183x003800030039xopenalex-snapshot
Molecular Support for the Hybrid Origin of the Wild Potato Species Solanum × rechei
inferredcites →https://doi.org/10.2307/2410309openalex-snapshot
Hybrid Zones and the Evolutionary Process.
inferredcites →https://doi.org/10.2307/2418721openalex-snapshot
Systematics and Plant Population Biology
inferredcites →https://doi.org/10.2307/2419546openalex-snapshot
Reconstructing Hybrid Speciation Using Sequences of Low Copy Nuclear Genes: Hybrid Origins of Five Paeonia Species Based on Adh Gene Phylogenies
inferredcites →https://doi.org/10.2307/2446155openalex-snapshot
Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae)
inferredcites →https://doi.org/10.2307/25065301openalex-snapshot
Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]
inferredcites →https://doi.org/10.2307/3244065openalex-snapshot
Experimental and Molecular Approaches to Plant Biosystematics
inferredcites →https://doi.org/10.2307/3298586openalex-snapshot
Phylogeny, Radiation, and Transoceanic Dispersal of New Zealand Alpine Buttercups: Molecular Evidence under Split Decomposition
inferredcites →https://doi.org/10.2307/3647379openalex-snapshot
Polyploidy: Some Things Old to Go with the New
inferredcites →https://doi.org/10.2307/4135439openalex-snapshot
Singlelocus molecular markers for inferring relationships at lower taxonomic levels: observations and comments
inferredcites →https://doi.org/10.2307/4135441openalex-snapshot
Phylogeny and systematics of Achillea (AsteraceaeAnthemideae) inferred from nrITS and plastid trnLF DNA sequences
inferredcites →https://doi.org/10.2307/4135487openalex-snapshot
Morphological and Molecular Investigation of the Parentage and Maternity of Anacamptis xalbuferensis (A. fragrans x A. robusta), a New Hybrid Orchid from Mallorca, Spain
inferredcites →https://doi.org/10.2307/j.ctv1nzfgj7openalex-snapshot
Phylogeography
inferredcites →https://doi.org/10.3732/ajb.91.1.139openalex-snapshot
The phylogeny of Gaura (Onagraceae) based on ITS, ETS, andtrnL‐F sequence data
inferredcites →https://doi.org/10.3732/ajb.91.10.1700openalex-snapshot
Reconstructing patterns of reticulate evolution in plants
inferredcites →https://doi.org/10.3732/ajb.91.2.254openalex-snapshot
Molecular evidence for bicontinental hybridogenous genomic constitution in Lepidium sensu stricto (Brassicaceae) species from Australia and New Zealand
inferredcites →https://doi.org/10.3732/ajb.91.3.474openalex-snapshot
Patterns of evolution in western North American Mimulus (Phrymaceae)
inferredcites →https://doi.org/10.3732/ajb.91.5.707openalex-snapshot
Molecular and cytological examination of Calopogon (Orchidaceae, Epidendroideae): circumscription, phylogeny, polyploidy, and possible hybrid speciation
inferredcites →https://doi.org/10.3732/ajb.91.5.736openalex-snapshot
Reticulate evolution in kiwifruit (Actinidia, Actinidiaceae) identified by comparing their maternal and paternal phylogenies
inferredcites →https://doi.org/10.3732/ajb.91.7.1022openalex-snapshot
Molecular cytogenetic analysis of recently evolved Tragopogon (Asteraceae) allopolyploids reveal a karyotype that is additive of the diploid progenitors
inferredcites →https://doi.org/10.3732/ajb.91.8.1231openalex-snapshot
Origin of the disjunct tetraploid Cardamine amporitana (Brassicaceae) assessed with nuclear and chloroplast DNA sequence data
inferredcites →https://doi.org/10.3732/ajb.91.9.1398openalex-snapshot
Phylogeny of Populus (Salicaceae) based on nucleotide sequences of chloroplast TRNT‐TRNF region and nuclear rDNA
inferredcites →https://doi.org/10.3732/ajb.91.9.1419openalex-snapshot
Dactylorhiza (Orchidaceae) in European Russia: combined molecular and morphological analysis
inferredcites →https://doi.org/10.5860/choice.35-0883openalex-snapshot
Natural hybridization and evolution
inferredcites →https://doi.org/10.5860/choice.37-5647openalex-snapshot
Phylogeography: the history and formation of species
inferredcites →https://doi.org/10.5860/choice.39-2183openalex-snapshot
MacClade 4.0: analysis of phylogeny and character evolution
inferredcites →https://doi.org/10.7312/gran92318openalex-snapshot
Plant Speciation
inferredcites →https://doi.org/10.7751/telopea20035617openalex-snapshot
Assessment of the hybrid status of some Malesian plants using Amplified Fragment Length Polymorphism

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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New circumscription of Trichomanes cupressoides Desvaux (Hymenophyllaceae), an endemic filmy fern from the Seychelles (Indian Ocean), and new insights into the genus Abrodictyum C.Presl in the western Indian Ocean
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inferred← citeshttps://doi.org/10.1002/tax.12062openalex-snapshot
Generic classification of Amaryllidaceae tribe Hippeastreae
inferred← citeshttps://doi.org/10.1002/tax.581016openalex-snapshot
Phylogeny and evolution of the Arctium‐Cousinia complex (Compositae, Cardueae‐Carduinae)
inferred← citeshttps://doi.org/10.1002/tax.584008openalex-snapshot
Rampant nonmonophyly of species in Kniphofia Moench (Asphodelaceae) suggests a recent Afromontane radiation
inferred← citeshttps://doi.org/10.1002/tax.596002openalex-snapshot
Generic delineation, phylogeny and subtribal affinities of Phagnalon and Aliella (Compositae, Gnaphalieae) based on nuclear and chloroplast sequences
inferred← citeshttps://doi.org/10.1002/tax.602004openalex-snapshot
Challenges in polyploid phylogenetic reconstruction: A case story from the arctic‐alpine Cerastium alpinum complex
inferred← citeshttps://doi.org/10.1007/978-1-0716-0997-2_1openalex-snapshot
Plant Taxonomy: A Historical Perspective, Current Challenges, and Perspectives
inferred← citeshttps://doi.org/10.1007/978-1-62703-767-9_1openalex-snapshot
Plant Taxonomy: A Historical Perspective, Current Challenges, and Perspectives
inferred← citeshttps://doi.org/10.1007/s00338-015-1357-0openalex-snapshot
The distribution of intra-genomically variable dinoflagellate symbionts at Lord Howe Island, Australia
inferred← citeshttps://doi.org/10.1007/s00606-006-0417-xopenalex-snapshot
Polyploidy, hybridization and reticulate evolution: lessons from the Brassicaceae
inferred← citeshttps://doi.org/10.1007/s00606-008-0008-0openalex-snapshot
Phylogenetic utility of MORE AXILLARY GROWTH4 (MAX4)-like genes: a case study in Digitalis/Isoplexis (Plantaginaceae)
inferred← citeshttps://doi.org/10.1007/s00606-008-0102-3openalex-snapshot
Hybridization drives speciation in Gagea (Liliaceae)
inferred← citeshttps://doi.org/10.1007/s00606-010-0327-9openalex-snapshot
A phylogenetic analysis of the genus Paspalum (Poaceae) based on cpDNA and morphology
inferred← citeshttps://doi.org/10.1007/s00606-013-0909-4openalex-snapshot
Analysis of taxonomic and geographic patterns of Turkish Veronica orientalis using nuclear and plastid DNA and morphological data
inferred← citeshttps://doi.org/10.1007/s00606-025-01937-2openalex-snapshot
Cytogenetic comparison of Cuscuta psorothamnensis and C. veatchii (Convolvulaceae), two species originated from recurrent hybridization between the same diploid parents
inferred← citeshttps://doi.org/10.1007/s00606-025-01950-5openalex-snapshot
Morphological complexity disguises a natural hybrid of Euphorbia from the sandstone hills of Belagavi, India
inferred← citeshttps://doi.org/10.1007/s10722-013-9965-4openalex-snapshot
Crossability patterns within and among Oryza series Sativae species from Asia and Australia
inferred← citeshttps://doi.org/10.1007/s11295-008-0162-0openalex-snapshot
Phylogenetic relationships in Betula (Betulaceae) based on AFLP markers
inferred← citeshttps://doi.org/10.1007/s12041-013-0293-4openalex-snapshot
To network or not to network, that is the question
inferred← citeshttps://doi.org/10.1007/s13127-016-0316-0openalex-snapshot
Against all odds: reconstructing the evolutionary history of Scrophularia (Scrophulariaceae) despite high levels of incongruence and reticulate evolution
inferred← citeshttps://doi.org/10.1016/j.bse.2007.08.003openalex-snapshot
Applying AFLPs in Aizoaceae: The Delosperma herbeum complex as a case study
inferred← citeshttps://doi.org/10.1016/j.bse.2008.07.001openalex-snapshot
The long and the short of gene flow and reproductive isolation: Inter-Simple Sequence Repeat (ISSR) markers support the recognition of two floral forms in Pelargonium reniforme (Geraniaceae)
inferred← citeshttps://doi.org/10.1016/j.bse.2015.07.021openalex-snapshot
“Barcoding” and ISSR data illuminate a problematic infraspecific taxonomy for Chrysanthemoides monilifera (Calenduleae; Asteraceae): Lessons for biocontrol of a noxious weed
inferred← citeshttps://doi.org/10.1016/j.sajb.2009.05.006openalex-snapshot
Nuclear and chloroplast DNA-based phylogenies of Chrysanthemoides Tourn. ex Medik. (Calenduleae; Asteraceae) reveal extensive incongruence and generic paraphyly, but support the recognition of infraspecific taxa in C. monilifera
inferred← citeshttps://doi.org/10.1016/j.sajb.2012.07.014openalex-snapshot
Species limits in Vachellia (Acacia) karroo (Mimosoideae: Leguminoseae): Evidence from automated ISSR DNA “fingerprinting”
inferred← citeshttps://doi.org/10.1016/j.shpsc.2012.10.003openalex-snapshot
When integration fails: Prokaryote phylogeny and the tree of life
inferred← citeshttps://doi.org/10.1016/j.tplants.2006.06.004openalex-snapshot
Reconstructing reticulate evolutionary histories of plants
inferred← citeshttps://doi.org/10.1016/j.ympev.2007.12.008openalex-snapshot
Dealing with incongruence in the quest for the species tree: A case study from the orchid genus Satyrium
inferred← citeshttps://doi.org/10.1016/j.ympev.2008.05.030openalex-snapshot
A novel supermatrix approach improves resolution of phylogenetic relationships in a comprehensive sample of danthonioid grasses
inferred← citeshttps://doi.org/10.1016/j.ympev.2009.03.010openalex-snapshot
The polyploid series of Centaurea toletana: Glacial migrations and introgression revealed by nrDNA and cpDNA sequence analyzes
inferred← citeshttps://doi.org/10.1016/j.ympev.2009.07.024openalex-snapshot
Flanking regions of monomorphic microsatellite loci provide a new source of data for plant species-level phylogenetics
inferred← citeshttps://doi.org/10.1016/j.ympev.2011.11.003openalex-snapshot
Speciation and evolution in the Gagea reticulata species complex (Tulipeae; Liliaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.03.012openalex-snapshot
Sorting through the chaff, nDNA gene trees for phylogenetic inference and hybrid identification of annual sunflowers (Helianthus sect. Helianthus)
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.05.008openalex-snapshot
A molecular phylogeny of the Lepidozia generic complex supports re-circumscription of the Lepidozioideae
inferred← citeshttps://doi.org/10.1016/j.ympev.2013.09.023openalex-snapshot
Diversification of Scrophularia (Scrophulariaceae) in the Western Mediterranean and Macaronesia – Phylogenetic relationships, reticulate evolution and biogeographic patterns
inferred← citeshttps://doi.org/10.1016/j.ympev.2017.07.015openalex-snapshot
Trans-biome diversity in Australian grass-specialist lizards (Diplodactylidae: Strophurus)
inferred← citeshttps://doi.org/10.1038/srep40057openalex-snapshot
ITS non-concerted evolution and rampant hybridization in the legume genus Lespedeza (Fabaceae)
inferred← citeshttps://doi.org/10.1071/sb07010openalex-snapshot
Nuclear and plastid DNA sequences reveal complex reticulate patterns in Australian water-lilies (Nymphaea subgenus Anecphya, Nymphaeaceae)
inferred← citeshttps://doi.org/10.1071/sb09040openalex-snapshot
DNA sequences from three genomes reveal multiple long-distance dispersals and non-monophyly of sections in Australasian Plantago (Plantaginaceae)
inferred← citeshttps://doi.org/10.1071/sb09040_eropenalex-snapshot
Erratum to : DNA sequences from three genomes reveal multiple long-distance dispersals and non-monophyly of sections in Australasian Plantago (Plantaginaceae)
inferred← citeshttps://doi.org/10.1080/10635150701424553openalex-snapshot
Untangling Complex Histories of Genome Mergings in High Polyploids
inferred← citeshttps://doi.org/10.1080/10635150802172168openalex-snapshot
The Reticulate History of Medicago (Fabaceae)
inferred← citeshttps://doi.org/10.1080/11263504.2011.634445openalex-snapshot
Homoploid hybrid speciation in Doronicum L. (Asteraceae)? Morphological, karyological and molecular evidences
inferred← citeshttps://doi.org/10.1080/17550874.2025.2457158openalex-snapshot
Hybrids in Cactaceae: current distribution and potential range of hybrids compared with parental species
inferred← citeshttps://doi.org/10.1086/651228openalex-snapshot
Hybrid Origin of Paeonia × yananensis Revealed by Microsatellite Markers, Chloroplast Gene Sequences, and Morphological Characteristics
inferred← citeshttps://doi.org/10.1086/653133openalex-snapshot
Phylogeography ofSchotia(Fabaceae): Recent Evolutionary Processes in an Ancient Thicket Biome Lineage
inferred← citeshttps://doi.org/10.1086/694763openalex-snapshot
Reconstructing Species Relationships within the Recently Diversified Genus Odontites Ludw. (Orobanchaceae): Evidence for Extensive Reticulate Evolution
inferred← citeshttps://doi.org/10.1086/715636openalex-snapshot
Discordance in a South African Memecylon Clade (Melastomataceae): Evidence for Reticulate Evolution
inferred← citeshttps://doi.org/10.1093/aob/mcac113openalex-snapshot
Phylotranscriptomics of liverworts: revisiting the backbone phylogeny and ancestral gene duplications
inferred← citeshttps://doi.org/10.1093/aob/mcn117openalex-snapshot
Intraspecific Variation in Viola suavis in Europe: Parallel Evolution of White-flowered Morphotypes
inferred← citeshttps://doi.org/10.1093/aob/mcs127openalex-snapshot
New insights into Trimezieae (Iridaceae) phylogeny: what do molecular data tell us?
inferred← citeshttps://doi.org/10.1093/aob/mcw138openalex-snapshot
Origin of year-long bean (Phaseolus dumosusMacfady, Fabaceae) from reticulated hybridization events between multiplePhaseolusspecies
inferred← citeshttps://doi.org/10.1093/molbev/msp309openalex-snapshot
Using Data-Display Networks for Exploratory Data Analysis in Phylogenetic Studies
inferred← citeshttps://doi.org/10.1093/sysbio/syp010openalex-snapshot
Disentangling Reticulate Evolution in an Arctic–Alpine Polyploid Complex
inferred← citeshttps://doi.org/10.1093/sysbio/syp068openalex-snapshot
Reticulation, Data Combination, and Inferring Evolutionary History: An Example from Danthonioideae (Poaceae)
inferred← citeshttps://doi.org/10.1093/sysbio/syt052openalex-snapshot
Constructing Phylogenies in the Presence Of Intra-Individual Site Polymorphisms (2ISPs) with a Focus on the Nuclear Ribosomal Cistron
inferred← citeshttps://doi.org/10.1101/2025.01.15.632994openalex-snapshot
Phylogenetic and taxonomic insights into Betula : low-coverage whole genome sequencing and plastome analysis with focus on the rare Ukrainian endemic species Betula klokovii Zaverucha
inferred← citeshttps://doi.org/10.1111/boj.12177openalex-snapshot
The role of parental and hybrid species in multiple introgression events: evidence of homoploid hybrid speciation inCentaurea(Cardueae, Asteraceae)
inferred← citeshttps://doi.org/10.1111/j.1469-8137.2006.01738.xopenalex-snapshot
The role of hybridization, polyploidization and glaciation in the origin and evolution of the apomicticRanunculus cassubicuscomplex
inferred← citeshttps://doi.org/10.1111/j.1558-5646.2010.01063.xopenalex-snapshot
RECONSTRUCTING RETICULATION HISTORY IN A PHYLOGENETIC FRAMEWORK AND THE POTENTIAL OF ALLOPATRIC SPECIATION DRIVEN BY POLYPLOIDY IN AN AGAMIC COMPLEX IN CRATAEGUS (ROSACEAE)
inferred← citeshttps://doi.org/10.1111/jse.12122openalex-snapshot
Phylogenetic analyses and chromosome counts reveal multiple cryptic species in Bupleurum commelynoideum (Apiaceae)
inferred← citeshttps://doi.org/10.1111/jse.12444openalex-snapshot
Testing reticulate evolution of four Vitis species from East Asia using restriction‐site associated DNA sequencing
inferred← citeshttps://doi.org/10.1111/jse.12918openalex-snapshot
Phylogenetic relationships, hybridization events, and drivers of diversification of East Asian wild grapes as revealed by phylogenomic analyses
inferred← citeshttps://doi.org/10.1111/mec.13189openalex-snapshot
Reticulate evolution and sea‐level fluctuations together drove species diversification of slipper orchids ( P aphiopedilum) in S outh‐ E ast A sia
inferred← citeshttps://doi.org/10.1111/mec.70050openalex-snapshot
Revealing Speciation Mechanisms Across Endemic Southern Andean Lilies (Phycella, Hippeastreae, Amaryllidaceae) in the Chilean Biodiversity Hotspot
inferred← citeshttps://doi.org/10.1139/b08-133openalex-snapshot
Overcoming paralogy and incomplete lineage sorting to detect a phylogeographic signal: a GapC study of Armeria pungens
inferred← citeshttps://doi.org/10.1139/cjb-2021-0145openalex-snapshot
Origin of Symphyotrichum anticostense (Asteraceae, Astereae), an endemic, high polyploid species of the Gulf of St. Lawrence region, based on morphological and nrDNA evidence
inferred← citeshttps://doi.org/10.1159/000121087openalex-snapshot
The use of cytogenetic tools for studies in the crop-to-wild gene transfer scenario
inferred← citeshttps://doi.org/10.11606/t.41.2011.tde-30092011-132454openalex-snapshot
Towards a phylogenetic classification of Lychnophorinae (Asteraceae: Vernonieae)
inferred← citeshttps://doi.org/10.1186/s40529-017-0164-zopenalex-snapshot
Taxonomy of Cyrtochilum-alliance (Orchidaceae) in the light of molecular and morphological data
inferred← citeshttps://doi.org/10.12705/635.6openalex-snapshot
The limitations of molecular markers in phylogenetic reconstruction: The case of Centaurea sect. Phrygia (Compositae)
inferred← citeshttps://doi.org/10.1371/journal.pone.0001913openalex-snapshot
A Comparison of Phylogenetic Network Methods Using Computer Simulation
inferred← citeshttps://doi.org/10.1371/journal.pone.0113207openalex-snapshot
Key Processes for Cheirolophus (Asteraceae) Diversification on Oceanic Islands Inferred from AFLP Data
inferred← citeshttps://doi.org/10.14267/phd.2014031openalex-snapshot
A Dianthus sect. Plumaria (Opiz) Asch. et Graebn. közép-európai fajainak komplex molekuláris taxonómiai értékelése
inferred← citeshttps://doi.org/10.1600/036364407782250689openalex-snapshot
Phylogeny and Biogeography of Encelia (Asteraceae) in the Sonoran and Peninsular Deserts Based on Multiple DNA Sequences
inferred← citeshttps://doi.org/10.1600/036364409788606415openalex-snapshot
Molecular Phylogenetics of the Dragon's Blood Croton Section Cyclostigma (Euphorbiaceae): A Polyphyletic Assemblage Unraveled
inferred← citeshttps://doi.org/10.1600/036364412x635377openalex-snapshot
A Phylogenetic Investigation of Botrychium s. s. (Ophioglossaceae): Evidence from Three Plastid DNA Sequence Datasets
inferred← citeshttps://doi.org/10.1600/036364412x648760openalex-snapshot
Systematics of Symphyotrichinae (Asteraceae: Astereae): Disagreements Between Two Nuclear Regions Suggest a Complex Evolutionary History
inferred← citeshttps://doi.org/10.1600/036364414x678099openalex-snapshot
Testing Deep Reticulate Evolution in Amaryllidaceae Tribe Hippeastreae (Asparagales) with ITS and Chloroplast Sequence Data
inferred← citeshttps://doi.org/10.1600/036364415x686585openalex-snapshot
A Phylogenetic Analysis of Lychnophorinae (Asteraceae: Vernonieae) Based on Molecular and Morphological Data
inferred← citeshttps://doi.org/10.1600/036364417x694610openalex-snapshot
Reticulate Evolution in Elatine L. (Elatinaceae), a Predominantly Autogamous Genus of Aquatic Plants
inferred← citeshttps://doi.org/10.1600/036364419x15562052252027openalex-snapshot
A Curious New Species of Xenostegia (Convolvulaceae) from Central Africa, with Remarks on the Phylogeny of the Genus
inferred← citeshttps://doi.org/10.1600/036364422x16442668423347openalex-snapshot
Revised Taxonomy of theArctotisAnnual Clade (Arctotideae, Asteraceae) from Southern Africa: Integration of Molecular Phylogenetic and Morphological Evidence
inferred← citeshttps://doi.org/10.17520/biods.2017041openalex-snapshot
Natural hybridization and speciation
inferred← citeshttps://doi.org/10.2307/25065472openalex-snapshot
IOPB Symposium: Plant Evolution in Mediterranean Climate Zones
inferred← citeshttps://doi.org/10.2307/25065631openalex-snapshot
Paraphyletic versus monophyletic taxa—evolutionary versus cladistic classifications
inferred← citeshttps://doi.org/10.2307/25065957openalex-snapshot
AFLP trees versus scatterplots: evolution and phylogeography of the polyploid complex Achillea millefolium agg. (Asteraceae)
inferred← citeshttps://doi.org/10.26686/wgtn.16934719openalex-snapshot
Evolution of Australasian Plantago (Plantaginaceae)
inferred← citeshttps://doi.org/10.26686/wgtn.16934719.v1openalex-snapshot
Evolution of Australasian Plantago (Plantaginaceae)
inferred← citeshttps://doi.org/10.26686/wgtn.16970986openalex-snapshot
The Evolution of Wahlenbergia (Campanulaceae) in Australasia
inferred← citeshttps://doi.org/10.26686/wgtn.16970986.v1openalex-snapshot
The Evolution of Wahlenbergia (Campanulaceae) in Australasia
inferred← citeshttps://doi.org/10.26686/wgtn.17008717openalex-snapshot
Intra-genomic variation in symbiotic dinoflagellates: Recent divergence or natural hybridization?
inferred← citeshttps://doi.org/10.26686/wgtn.17008717.v1openalex-snapshot
Intra-genomic variation in symbiotic dinoflagellates: Recent divergence or natural hybridization?
inferred← citeshttps://doi.org/10.2985/026.027.0112openalex-snapshot
Examination of Reticulate Evolution Involving Haageocereus and Espostoa
inferred← citeshttps://doi.org/10.3389/fgene.2021.709996openalex-snapshot
Comparative Chloroplast Genome Analyses of the Winter-Blooming Eastern Asian Endemic Genus Chimonanthus (Calycanthaceae) With Implications For Its Phylogeny and Diversification
inferred← citeshttps://doi.org/10.3389/fpls.2014.00567openalex-snapshot
Using multi-locus allelic sequence data to estimate genetic divergence among four Lilium (Liliaceae) cultivars
inferred← citeshttps://doi.org/10.3389/fpls.2021.638650openalex-snapshot
Resolving Recalcitrant Clades in the Pantropical Ochnaceae: Insights From Comparative Phylogenomics of Plastome and Nuclear Genomic Data Derived From Targeted Sequencing
inferred← citeshttps://doi.org/10.3389/fpls.2022.767635openalex-snapshot
Reticulate Evolution in AA-Genome Wild Rice in Australia
inferred← citeshttps://doi.org/10.3389/fpls.2023.1234148openalex-snapshot
Parallel evolution, atavism, and extensive introgression explain the radiation of Epimedium sect. Diphyllon (Berberidaceae) in southern East Asia
inferred← citeshttps://doi.org/10.3417/2006017openalex-snapshot
Assumption 0 Analysis: Comparative Phylogenetic Studies in the Age of Complexity1,2,3
inferred← citeshttps://doi.org/10.3732/ajb.0800308openalex-snapshot
Insights into reticulate evolution in Machaerantherinae (Asteraceae: Astereae): 5S ribosomal RNA spacer variation, estimating support for incongruence, and constructing reticulate phylogenies
inferred← citeshttps://doi.org/10.3732/ajb.0900244openalex-snapshot
Phylogenetic relationships and natural hybridization among the North American woody bamboos (Poaceae: Bambusoideae: Arundinaria)
inferred← citeshttps://doi.org/10.3732/ajb.93.8.1206openalex-snapshot
Worldwide phylogeny and biogeography of Cardamine flexuosa (Brassicaceae) and its relatives
inferred← citeshttps://doi.org/10.3732/ajb.95.3.353openalex-snapshot
AFLP markers as a tool to reconstruct complex relationships: A case study in Rosa (Rosaceae)
inferred← citeshttps://doi.org/10.70675/ab03f0a7zf1ebz40a0z854bzdbddf89ed61copenalex-snapshot
Caractérisation des espèces aphylles du genre Vanilla endémiques de Madagascar en vue de leur conservation
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