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Genome-Based Characterization of Biological Processes That Differentiate Closely Related Bacteria

https://doi.org/10.3389/fmicb.2018.00113

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Outgoing claims: the papers this work cites, builds on, or argues with.

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Pantoea pleuroti sp. nov., Isolated from the Fruiting Bodies of Pleurotus eryngii

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Genomics and current genetic understanding of Erwinia amylovora and the fire blight antagonist Pantoea vagans

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High-affinity l-arabinose transport operon

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Two open reading frames adjacent to the Escherichia coli K-12 transketolase (tkt) gene show high similarity to the mannitol phosphotransferase system enzymes from Escherichia coli and various Gram-positive bacteria

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Nucleotide sequence of the sucrase gene of Bacillus subtilis

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Quantitative analysis and engineering of fatty acid biosynthesis in E. coli

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The Pathway of myo-Inositol Degradation in Aerobacter aerogenes

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DEAMINATION OF HISTIDINE TO FORM UROCANIC ACID IN LIVER

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Cloning and nucleotide sequence of the isoamylase gene from Pseudomonas amyloderamosa SB-15.

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Biosynthesis of bacterial glycogen. Primary structure of Escherichia coli 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-alpha-D-(1, 4-alpha-D-glucano)-transferase as deduced from the nucleotide sequence of the glg B gene.

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Recycling of α-d-ribose 1-phosphate for nucleoside interconversion

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Virulence factors in Escherichia coli isolated from the blood of bacteremic neonatal calves

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AlkB Influences the Chloroacetaldehyde-Induced Mutation Spectra and Toxicity in the pSP189 supF Shuttle Vector

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The natural polyamine spermine functions directly as a free radical scavenger

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Aspartate Dehydrogenase, a Novel Enzyme Identified from Structural and Functional Studies of TM1643

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Functions of Polyamines in Mammals

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Phylogenomics and the Dynamic Genome Evolution of the Genus Streptococcus

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The Complexity Hypothesis Revisited: Connectivity Rather Than Function Constitutes a Barrier to Horizontal Gene Transfer

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MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

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The KEGG databases at GenomeNet

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KEGG as a reference resource for gene and protein annotation

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Purification, Crystallization, and Some Properties of Creatine Amidinohydrolase from Pseudomonus putida

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Prokaryotic Evolution in Light of Gene Transfer

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Transfer of Enterobacter agglomerans (Beijerinck 1888) Ewing and Fife 1972 to Pantoea gen. nov. as Pantoea agglomerans comb. nov. and Description of Pantoea dispersa sp. nov.

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Transfer of Erwinia ananas (synonym, Erwinia uredovora) and Erwinia stewartii to the Genus Pantoea emend. as Pantoea ananas (Serrano 1928) comb. nov. and Pantoea stewartii (Smith 1898) comb. nov., Respectively, and Description of Pantoea stewartii subsp. indologenes subsp. nov.

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Bacillus subtilis guanine deaminase is encoded by the yknA gene and is induced during growth with purines as the nitrogen source

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Tatumella saanichensis sp. nov., isolated from a cystic fibrosis patient

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Pantoea vagans sp. nov., Pantoea eucalypti sp. nov., Pantoea deleyi sp. nov. and Pantoea anthophila sp. nov.

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Transfer of Pantoea citrea, Pantoea punctata and Pantoea terrea to the genus Tatumella emend. as Tatumella citrea comb. nov., Tatumella punctata comb. nov. and Tatumella terrea comb. nov. and description of Tatumella morbirosei sp. nov.

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Notes on the characterization of prokaryote strains for taxonomic purposes

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Maturation of the Translation Inhibitor Microcin C

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The Escherichia coli Yej Transporter Is Required for the Uptake of Translation Inhibitor Microcin C

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Draft Genome Sequence of Pantoea sp. Strain A4, a Rafflesia-Associated Bacterium That Produces N -Acylhomoserine Lactones as Quorum-Sensing Molecules

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Nucleotide sequence of the osmoregulatory proU operon of Escherichia coli

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Sequencing and characterization of a gene cluster encoding the enzymes for L-rhamnose metabolism in Escherichia coli

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Identification of a Phosphotransferase System of Escherichia coli Required for Growth on N -Acetylmuramic Acid

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The yliA , - B , - C , and - D Genes of Escherichia coli K-12 Encode a Novel Glutathione Importer with an ATP-Binding Cassette

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Towards a Genome-Based Taxonomy for Prokaryotes

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MurQ Etherase Is Required by Escherichia coli in Order To Metabolize Anhydro- N -Acetylmuramic Acid Obtained either from the Environment or from Its Own Cell Wall

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inferredcites →https://doi.org/10.3390/metabo4010001openalex-snapshot

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Peer Review #1 of "The synergistic effect of concatenation in phylogenomics: the case in Pantoea (v0.1)"

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Peer Review #2 of "The synergistic effect of concatenation in phylogenomics: the case in Pantoea (v0.1)"

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Peer Review #3 of "The synergistic effect of concatenation in phylogenomics: the case in Pantoea (v0.1)"

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Peer Review #1 of "The synergistic effect of concatenation in phylogenomics: the case in Pantoea (v0.2)"

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Peer Review #3 of "The synergistic effect of concatenation in phylogenomics: the case in Pantoea (v0.2)"

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The synergistic effect of concatenation in phylogenomics: the case in Pantoea

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.