On the public citation graph

A Comprehensive Gene Co-Expression Network Analysis Reveals a Role of GhWRKY46 in Responding to Drought and Salt Stresses

https://doi.org/10.3390/ijms232012181

0 signed · 86 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.

Claim with ORCID

Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.

See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/meth.2001.1262openalex-snapshot

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

inferredcites →https://doi.org/10.1007/s00299-020-02590-4openalex-snapshot

GhWRKY21 regulates ABA-mediated drought tolerance by fine-tuning the expression of GhHAB in cotton

inferredcites →https://doi.org/10.1007/s10059-011-0047-1openalex-snapshot

WRKY22 Transcription Factor Mediates Dark-Induced Leaf Senescence in Arabidopsis

inferredcites →https://doi.org/10.1007/s11738-020-03117-wopenalex-snapshot

Dynamic transcriptome and co-expression network analysis of the cotton (Gossypium hirsutum) root response to salinity stress at the seedling stage

inferredcites →https://doi.org/10.1007/s12374-020-09231-zopenalex-snapshot

Metabolome and Transcriptome Analyses Reveal Tissue-Specific Variations in Gene Expression and Metabolites of Olive

inferredcites →https://doi.org/10.1016/j.bbrc.2015.07.064openalex-snapshot

Transcriptomic changes during maize roots development responsive to Cadmium (Cd) pollution using comparative RNAseq-based approach

inferredcites →https://doi.org/10.1016/j.cell.2016.08.029openalex-snapshot

Abiotic Stress Signaling and Responses in Plants

inferredcites →https://doi.org/10.1016/j.cj.2018.10.005openalex-snapshot

The cotton WRKY transcription factor GhWRKY70 negatively regulates the defense response against Verticillium dahliae

inferredcites →https://doi.org/10.1016/j.gene.2013.07.084openalex-snapshot

Evaluation and selection of reliable reference genes for gene expression under abiotic stress in cotton (Gossypium hirsutum L.)

inferredcites →https://doi.org/10.1016/j.indcrop.2018.12.070openalex-snapshot

Progress and perspective on drought and salt stress tolerance in cotton

inferredcites →https://doi.org/10.1016/j.molp.2019.10.012openalex-snapshot

Genetic Contribution of Paleopolyploidy to Adaptive Evolution in Angiosperms

inferredcites →https://doi.org/10.1016/j.pbi.2015.01.003openalex-snapshot

Integrated metabolomics for abiotic stress responses in plants

inferredcites →https://doi.org/10.1016/j.pbiomolbio.2019.02.005openalex-snapshot

Integrative meta-analysis of transcriptomic responses to abiotic stress in cotton

inferredcites →https://doi.org/10.1016/j.plaphy.2019.07.023openalex-snapshot

Comparative transcriptomics and weighted gene co-expression correlation network analysis (WGCNA) reveal potential regulation mechanism of carotenoid accumulation in Chrysanthemum × morifolium

inferredcites →https://doi.org/10.1016/j.ydbio.2016.07.023openalex-snapshot

Plant developmental responses to climate change

inferredcites →https://doi.org/10.1016/j.ygeno.2011.04.007openalex-snapshot

Transcriptome analysis reveals salt-stress-regulated biological processes and key pathways in roots of cotton (Gossypium hirsutum L.)

inferredcites →https://doi.org/10.1016/s1360-1385(00)01600-9openalex-snapshot

The WRKY superfamily of plant transcription factors

inferredcites →https://doi.org/10.1016/s2095-3119(18)62029-5openalex-snapshot

Discovery of leaf region and time point related modules and genes in maize (Zea mays L.) leaves by Weighted Gene Co-expression Network analysis (WGCNA) of gene expression profiles of carbon metabolism

inferredcites →https://doi.org/10.1038/36285openalex-snapshot

Mutation of the mouse klotho gene leads to a syndrome resembling ageing.

inferredcites →https://doi.org/10.1038/nmeth.3317openalex-snapshot

HISAT: a fast spliced aligner with low memory requirements

inferredcites →https://doi.org/10.1038/s41421-018-0045-yopenalex-snapshot

Quantitative integration of epigenomic variation and transcription factor binding using MAmotif toolkit identifies an important role of IRF2 as transcription activator at gene promoters

inferredcites →https://doi.org/10.1038/s41438-020-0279-3openalex-snapshot

Transcriptome profiles reveal that gibberellin-related genes regulate weeping traits in crape myrtle

inferredcites →https://doi.org/10.1038/s41588-019-0371-5openalex-snapshot

Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton

inferredcites →https://doi.org/10.1038/s41598-018-37035-2openalex-snapshot

The cotton WRKY transcription factor (GhWRKY33) reduces transgenic Arabidopsis resistance to drought stress

inferredcites →https://doi.org/10.1038/srep38436openalex-snapshot

Co-expression network analyses identify functional modules associated with development and stress response in Gossypium arboreum

inferredcites →https://doi.org/10.1089/omi.2011.0118openalex-snapshot

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot

The Sequence Alignment/Map format and SAMtools

inferredcites →https://doi.org/10.1093/bioinformatics/btp616openalex-snapshot

edgeR : a Bioconductor package for differential expression analysis of digital gene expression data

inferredcites →https://doi.org/10.1093/bioinformatics/btt656openalex-snapshot

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

inferredcites →https://doi.org/10.1093/bioinformatics/btu170openalex-snapshot

Trimmomatic: a flexible trimmer for Illumina sequence data

inferredcites →https://doi.org/10.1093/jxb/erq188openalex-snapshot

A comparative study of salt tolerance parameters in 11 wild relatives of Arabidopsis thaliana

inferredcites →https://doi.org/10.1093/nar/30.1.325openalex-snapshot

PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences

inferredcites →https://doi.org/10.1093/nar/gkaa1042openalex-snapshot

AtMAD: Arabidopsis thaliana multi-omics association database

inferredcites →https://doi.org/10.1093/nar/gkh085openalex-snapshot

BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomics

inferredcites →https://doi.org/10.1093/nar/gkr1293openalex-snapshot

MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity

inferredcites →https://doi.org/10.1093/nar/gkv1248openalex-snapshot

eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences

inferredcites →https://doi.org/10.1093/nar/gkw910openalex-snapshot

ccNET: Database of co-expression networks with functional modules for diploid and polyploid Gossypium

inferredcites →https://doi.org/10.1093/nar/gkx725openalex-snapshot

qPrimerDB: a thermodynamics-based gene-specific qPCR primer database for 147 organisms

inferredcites →https://doi.org/10.1093/nar/gkz113openalex-snapshot

Structural basis of dimerization and dual W-box DNA recognition by rice WRKY domain

inferredcites →https://doi.org/10.1093/nar/gkz953openalex-snapshot

MaGenDB: a functional genomics hub for Malvaceae plants

inferredcites →https://doi.org/10.1093/plcell/koab153openalex-snapshot

Phosphorylation of WRKY16 by MPK3-1 is essential for its transcriptional activity during fiber initiation and elongation in cotton (Gossypium hirsutum)

inferredcites →https://doi.org/10.1101/gr.1239303openalex-snapshot

Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

inferredcites →https://doi.org/10.1104/pp.19.00405openalex-snapshot

Malondialdehyde: Facts and Artifacts

inferredcites →https://doi.org/10.1105/tpc.17.00364openalex-snapshot

Arabidopsis WRKY46, WRKY54 and WRKY70 Transcription Factors Are Involved in Brassinosteroid-Regulated Plant Growth and Drought Response

inferredcites →https://doi.org/10.1111/jipb.12513openalex-snapshot

WRKY transcription factors in plant responses to stresses

inferredcites →https://doi.org/10.1111/pbi.13547openalex-snapshot

Divergent improvement of two cultivated allotetraploid cotton species

inferredcites →https://doi.org/10.1111/pce.13518openalex-snapshot

The role of amino acid metabolism during abiotic stress release

inferredcites →https://doi.org/10.1111/pce.13898openalex-snapshot

The ancient wave of polyploidization events in flowering plants and their facilitated adaptation to environmental stress

inferredcites →https://doi.org/10.1111/ppl.12651openalex-snapshot

A novel cotton WRKY gene, GhWRKY6‐like, improves salt tolerance by activating the ABA signaling pathway and scavenging of reactive oxygen species

inferredcites →https://doi.org/10.1111/tpj.12538openalex-snapshot

Transcription factor WRKY 46 regulates osmotic stress responses and stomatal movement independently in A rabidopsis

inferredcites →https://doi.org/10.1111/tpj.14526openalex-snapshot

Plant Regulomics: a data‐driven interface for retrieving upstream regulators from plant multi‐omics data

inferredcites →https://doi.org/10.1111/tpj.14580openalex-snapshot

Salt‐tolerance diversity in diploid and polyploid cotton (Gossypium) species

inferredcites →https://doi.org/10.1186/1471-2105-9-559openalex-snapshot

WGCNA: an R package for weighted correlation network analysis

inferredcites →https://doi.org/10.1186/1752-0509-8-s4-s11openalex-snapshot

cytoHubba: identifying hub objects and sub-networks from complex interactome

inferredcites →https://doi.org/10.1186/s12864-020-07171-zopenalex-snapshot

A comprehensive analysis of cotton VQ gene superfamily reveals their potential and extensive roles in regulating cotton abiotic stress

inferredcites →https://doi.org/10.1186/s12864-020-07260-zopenalex-snapshot

Temporal salt stress-induced transcriptome alterations and regulatory mechanisms revealed by PacBio long-reads RNA sequencing in Gossypium hirsutum

inferredcites →https://doi.org/10.1186/s12870-017-1039-xopenalex-snapshot

CottonFGD: an integrated functional genomics database for cotton

inferredcites →https://doi.org/10.1186/s12870-018-1367-5openalex-snapshot

Comprehensive analysis of NAC transcription factors uncovers their roles during fiber development and stress response in cotton

inferredcites →https://doi.org/10.1186/s12870-019-1688-zopenalex-snapshot

The WRKY transcription factor GhWRKY27 coordinates the senescence regulatory pathway in upland cotton (Gossypium hirsutum L.)

inferredcites →https://doi.org/10.1186/s12870-020-02431-2openalex-snapshot

Genome-wide identification and functional characterization of cotton (Gossypium hirsutum) MAPKKK gene family in response to drought stress

inferredcites →https://doi.org/10.1186/s12870-020-02726-4openalex-snapshot

Comparative transcriptome analysis reveals evolutionary divergence and shared network of cold and salt stress response in diploid D-genome cotton

inferredcites →https://doi.org/10.1186/s13059-019-1650-2openalex-snapshot

Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants

inferredcites →https://doi.org/10.1371/journal.pone.0054762openalex-snapshot

mRNA-seq Analysis of the Gossypium arboreum transcriptome Reveals Tissue Selective Signaling in Response to Water Stress during Seedling Stage

inferredcites →https://doi.org/10.1371/journal.pone.0143022openalex-snapshot

The Cotton WRKY Gene GhWRKY41 Positively Regulates Salt and Drought Stress Tolerance in Transgenic Nicotiana benthamiana

inferredcites →https://doi.org/10.1371/journal.pone.0191681openalex-snapshot

Identification of the group IIa WRKY subfamily and the functional analysis of GhWRKY17 in upland cotton (Gossypium hirsutum L.)

inferredcites →https://doi.org/10.1371/journal.pone.0245070openalex-snapshot

Transcriptomic analyses show that 24-epibrassinolide (EBR) promotes cold tolerance in cotton seedlings

inferredcites →https://doi.org/10.2174/1389202918666170227150057openalex-snapshot

Transcription Factors and Their Roles in Signal Transduction in Plants under Abiotic Stresses

inferredcites →https://doi.org/10.3389/fbioe.2020.00157openalex-snapshot

Gossypium hirsutum Salt Tolerance Is Enhanced by Overexpression of G. arboreum JAZ1

inferredcites →https://doi.org/10.3389/fpls.2018.00122openalex-snapshot

Plant Abiotic Stress Proteomics: The Major Factors Determining Alterations in Cellular Proteome

inferredcites →https://doi.org/10.3389/fpls.2019.01352openalex-snapshot

The Cotton GhWRKY91 Transcription Factor Mediates Leaf Senescence and Responses to Drought Stress in Transgenic Arabidopsis thaliana

inferredcites →https://doi.org/10.3389/fpls.2021.639104openalex-snapshot

Comparative Phenotypic and Transcriptomic Analysis Reveals Key Responses of Upland Cotton to Salinity Stress During Postgermination

inferredcites →https://doi.org/10.3390/genes10020119openalex-snapshot

Co-Expression Network Analysis and Hub Gene Selection for High-Quality Fiber in Upland Cotton (Gossypium hirsutum) Using RNA Sequencing Analysis

inferredcites →https://doi.org/10.3390/ijms19124087openalex-snapshot

The WRKY Transcription Factor GmWRKY12 Confers Drought and Salt Tolerance in Soybean

inferredcites →https://doi.org/10.3390/ijms20215244openalex-snapshot

Transcription Factor GarWRKY5 Is Involved in Salt Stress Response in Diploid Cotton Species (Gossypium aridum L.)

inferredcites →https://doi.org/10.3390/ijms21145095openalex-snapshot

Transcriptomic Profiling of Young Cotyledons Response to Chilling Stress in Two Contrasting Cotton (Gossypium hirsutum L.) Genotypes at the Seedling Stage

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4688593openalex-extracted

Transgenic Poplar with the Zygophyllum Xanthoxylon Zinc Finger Protein Transcription Factor Zxzf Gene Shows Improved Drought Resistance by Regulating Hormone Signal

inferred← citeshttps://doi.org/10.2139/ssrn.4788804openalex-extracted

Transgenic Poplar with the Zygophyllum Xanthoxylon Zinc Finger Protein Transcription Factor Zxzf Gene Shows Improved Drought Resistance by Regulating Hormone Signal

inferred← citeshttps://doi.org/10.1016/j.ecoenv.2026.120013openalex-snapshot

Comparative phytotoxicity of phenanthrene and pyrene to Leymus chinensis: Insights from physiological and transcriptomic responses

inferred← citeshttps://doi.org/10.1016/j.envexpbot.2024.105868openalex-snapshot

Transgenic poplar with the Zygophyllum xanthoxylon zinc finger protein transcription factor ZxZF gene shows improved drought resistance by regulating hormone signal

inferred← citeshttps://doi.org/10.1016/j.envexpbot.2024.105999openalex-snapshot

Hormonal signaling regulates photosynthetic function of alfalfa (Medicago sativa L.) under NaHCO3 stress

inferred← citeshttps://doi.org/10.1021/acs.jafc.6c04335openalex-snapshot

Jasmonic Acid Biosynthesis and the Activation of Signal Transduction Pathway Play a Crucial Role in Alfalfa Adaptation to Drought Stress

inferred← citeshttps://doi.org/10.1186/s12864-023-09546-4openalex-snapshot

A systematic analysis of the phloem protein 2 (PP2) proteins in Gossypium hirsutum reveals that GhPP2-33 regulates salt tolerance

inferred← citeshttps://doi.org/10.2139/ssrn.4866713openalex-snapshot

Hormone Signaling Transduction Plays a Key Role in Regulating Photosynthetic Function Responses to Nahco3 Stress in Alfalfa (Medicago Sativa L.)

inferred← citeshttps://doi.org/10.3389/fpls.2025.1532216openalex-snapshot

Physiological mechanism of lodging resistance of oat stalk and analysis of transcriptome differences

inferred← citeshttps://doi.org/10.3390/ijms24087349openalex-snapshot

Network Biology Analyses and Dynamic Modeling of Gene Regulatory Networks under Drought Stress Reveal Major Transcriptional Regulators in Arabidopsis

inferred← citeshttps://doi.org/10.3390/ijms241411621openalex-snapshot

Emerging Horizons in Plant Genetics and Breeding

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.