On the public citation graph

Genome-Scale Investigation of GARP Family Genes Reveals Their Pivotal Roles in Nutrient Stress Resistance in Allotetraploid Rapeseed

https://doi.org/10.3390/ijms232214484
0 signed · 121 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s00299-021-02772-8openalex-snapshot
Ca2+–CBL–CIPK: a modulator system for efficient nutrient acquisition
inferredcites →https://doi.org/10.1007/s00425-017-2711-yopenalex-snapshot
Evaluating the involvement and interaction of abscisic acid and miRNA156 in the induction of anthocyanin biosynthesis in drought-stressed plants
inferredcites →https://doi.org/10.1007/s00438-020-01749-8openalex-snapshot
Identification of genetic variation for salt tolerance in Brassica napus using genome-wide association mapping
inferredcites →https://doi.org/10.1007/s11103-014-0249-yopenalex-snapshot
A Brassica napus PHT1 phosphate transporter, BnPht1;4, promotes phosphate uptake and affects roots architecture of transgenic Arabidopsis
inferredcites →https://doi.org/10.1007/s11103-021-01118-yopenalex-snapshot
OsNAC109 regulates senescence, growth and development by altering the expression of senescence- and phytohormone-associated genes in rice
inferredcites →https://doi.org/10.1007/s11104-018-3652-3openalex-snapshot
Integrated genomic and transcriptomic insights into the two-component high-affinity nitrate transporters in allotetraploid rapeseed
inferredcites →https://doi.org/10.1016/j.devcel.2014.07.004openalex-snapshot
A MYB-Domain Protein EFM Mediates Flowering Responses to Environmental Cues in Arabidopsis
inferredcites →https://doi.org/10.1016/j.gene.2022.146283openalex-snapshot
Regulatory role of microRNAs (miRNAs) in the recent development of abiotic stress tolerance of plants
inferredcites →https://doi.org/10.1016/j.jplph.2020.153293openalex-snapshot
Gene duplication and stress genomics in Brassicas: Current understanding and future prospects
inferredcites →https://doi.org/10.1016/j.molp.2016.05.004openalex-snapshot
Nitrate Transport, Sensing, and Responses in Plants
inferredcites →https://doi.org/10.1016/j.molp.2020.06.009openalex-snapshot
TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data
inferredcites →https://doi.org/10.1016/j.pbi.2009.04.003openalex-snapshot
Physiological functions of mineral macronutrients
inferredcites →https://doi.org/10.1016/j.pbi.2017.07.006openalex-snapshot
The world according to GARP transcription factors
inferredcites →https://doi.org/10.1016/j.plantsci.2013.12.007openalex-snapshot
Identification and validation of promoters and cis-acting regulatory elements
inferredcites →https://doi.org/10.1016/j.plantsci.2021.110963openalex-snapshot
Physiologic, metabolomic, and genomic investigations reveal distinct glutamine and mannose metabolism responses to ammonium toxicity in allotetraploid rapeseed genotypes
inferredcites →https://doi.org/10.1016/j.plaphy.2016.03.023openalex-snapshot
TabHLH1, a bHLH-type transcription factor gene in wheat, improves plant tolerance to Pi and N deprivation via regulation of nutrient transporter gene transcription and ROS homeostasis
inferredcites →https://doi.org/10.1016/j.plaphy.2021.02.009openalex-snapshot
Boron uptake and distribution by oilseed rape (Brassica napus L.) as affected by different nitrogen forms under low and high boron supply
inferredcites →https://doi.org/10.1016/j.semcdb.2017.06.013openalex-snapshot
Molecular mechanisms of phosphate transport and signaling in higher plants
inferredcites →https://doi.org/10.1016/s1672-0229(07)60007-2openalex-snapshot
KaKs_Calculator: Calculating Ka and Ks Through Model Selection and Model Averaging
inferredcites →https://doi.org/10.1016/s1672-0229(10)60008-3openalex-snapshot
KaKs_Calculator 2.0: A Toolkit Incorporating Gamma-Series Methods and Sliding Window Strategies
inferredcites →https://doi.org/10.1038/nature09916openalex-snapshot
Ancestral polyploidy in seed plants and angiosperms
inferredcites →https://doi.org/10.1038/ncomms7274openalex-snapshot
AtNIGT1/HRS1 integrates nitrate and phosphate signals at the Arabidopsis root tip
inferredcites →https://doi.org/10.1038/nmeth.3176openalex-snapshot
Fast and sensitive protein alignment using DIAMOND
inferredcites →https://doi.org/10.1038/s41438-019-0130-xopenalex-snapshot
MicroRNA396-mediated alteration in plant development and salinity stress response in creeping bentgrass
inferredcites →https://doi.org/10.1038/s41467-018-03832-6openalex-snapshot
A NIGT1-centred transcriptional cascade regulates nitrate signalling and incorporates phosphorus starvation signals in Arabidopsis
inferredcites →https://doi.org/10.1038/s41467-022-29275-8openalex-snapshot
Mechanistic insights into the regulation of plant phosphate homeostasis by the rice SPX2 – PHR2 complex
inferredcites →https://doi.org/10.1038/s41598-017-18048-9openalex-snapshot
Elucidating the major hidden genomic components of the A, C, and AC genomes and their influence on Brassica evolution
inferredcites →https://doi.org/10.1038/s41598-020-66338-6openalex-snapshot
Genome wide analysis of NLP transcription factors reveals their role in nitrogen stress tolerance of rice
inferredcites →https://doi.org/10.1073/pnas.1316278111openalex-snapshot
DNA-binding specificities of plant transcription factors and their potential to define target genes
inferredcites →https://doi.org/10.1073/pnas.1404654111openalex-snapshot
SPX1 is a phosphate-dependent inhibitor of PHOSPHATE STARVATION RESPONSE 1 in Arabidopsis
inferredcites →https://doi.org/10.1073/pnas.96.26.15336openalex-snapshot
Psr1, a nuclear localized protein that regulates phosphorus metabolism in Chlamydomonas
inferredcites →https://doi.org/10.1080/07388551.2022.2093695openalex-snapshot
Smart reprograming of plants against salinity stress using modern biotechnological tools
inferredcites →https://doi.org/10.1080/15476286.2021.1899491openalex-snapshot
Recent advances in the regulation of plant miRNA biogenesis
inferredcites →https://doi.org/10.1080/15592324.2022.2129289openalex-snapshot
Exogenous melatonin confers cold tolerance in rapeseed ( Brassica napus L.) seedlings by improving antioxidants and genes expression
inferredcites →https://doi.org/10.1080/21645698.2020.1790287openalex-snapshot
SlEAD1, an EAR motif-containing ABA down-regulated novel transcription repressor regulates ABA response in tomato
inferredcites →https://doi.org/10.1080/21645698.2020.1859898openalex-snapshot
Omics: The way forward to enhance abiotic stress tolerance in Brassica napus L
inferredcites →https://doi.org/10.1093/bioinformatics/btm404openalex-snapshot
Clustal W and Clustal X version 2.0
inferredcites →https://doi.org/10.1093/bioinformatics/btu817openalex-snapshot
GSDS 2.0: an upgraded gene feature visualization server
inferredcites →https://doi.org/10.1093/bioinformatics/btz237openalex-snapshot
Discovery of tandem and interspersed segmental duplications using high-throughput sequencing
inferredcites →https://doi.org/10.1093/jxb/erab114openalex-snapshot
GARP transcription factors repress Arabidopsis nitrogen starvation response via ROS-dependent and -independent pathways
inferredcites →https://doi.org/10.1093/jxb/erac177openalex-snapshot
Local and systemic responses conferring acclimation of Brassica napus roots to low phosphorus conditions
inferredcites →https://doi.org/10.1093/jxb/ery219openalex-snapshot
Genome-wide identification of the GhARF gene family reveals that GhARF2 and GhARF18 are involved in cotton fibre cell initiation
inferredcites →https://doi.org/10.1093/molbev/msy096openalex-snapshot
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
inferredcites →https://doi.org/10.1093/nar/25.17.3389openalex-snapshot
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
inferredcites →https://doi.org/10.1093/nar/gkab1057openalex-snapshot
BRAD V3.0: an upgraded Brassicaceae database
inferredcites →https://doi.org/10.1093/nar/gkab301openalex-snapshot
Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation
inferredcites →https://doi.org/10.1093/nar/gkg076openalex-snapshot
The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community
inferredcites →https://doi.org/10.1093/nar/gkp335openalex-snapshot
MEME SUITE: tools for motif discovery and searching
inferredcites →https://doi.org/10.1093/nar/gks400openalex-snapshot
ExPASy: SIB bioinformatics resource portal
inferredcites →https://doi.org/10.1093/nar/gkw982openalex-snapshot
PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants
inferredcites →https://doi.org/10.1093/nar/gky316openalex-snapshot
psRNATarget: a plant small RNA target analysis server (2017 release)
inferredcites →https://doi.org/10.1093/nar/gky995openalex-snapshot
The Pfam protein families database in 2019
inferredcites →https://doi.org/10.1093/nar/gkz991openalex-snapshot
CDD/SPARCLE: the conserved domain database in 2020
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026248openalex-snapshot
Comparative Evolutionary Analysis of Chalcone Synthase and Alcohol Dehydrogenase Loci in Arabidopsis, Arabis, and Related Genera (Brassicaceae)
inferredcites →https://doi.org/10.1093/pcp/pct007openalex-snapshot
A Nitrate-Inducible GARP Family Gene Encodes an Auto-Repressible Transcriptional Repressor in Rice
inferredcites →https://doi.org/10.1101/gr.1239303openalex-snapshot
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
inferredcites →https://doi.org/10.1104/pp.114.255877openalex-snapshot
Cross-Species Network Analysis Uncovers Conserved Nitrogen-Regulated Network Modules in Rice
inferredcites →https://doi.org/10.1104/pp.120.3.685openalex-snapshot
Chlamydomonas reinhardtii Mutants Abnormal in Their Responses to Phosphorus Deprivation1
inferredcites →https://doi.org/10.1104/pp.15.01377openalex-snapshot
Nitrogen Use Efficiency Is Mediated by Vacuolar Nitrate Sequestration Capacity in Roots of Brassica napus
inferredcites →https://doi.org/10.1104/pp.18.00594openalex-snapshot
SPX4 Acts on PHR1-Dependent and -Independent Regulation of Shoot Phosphorus Status in Arabidopsis
inferredcites →https://doi.org/10.1105/tpc.002733openalex-snapshot
Molecular Structure of the GARP Family of Plant Myb-Related DNA Binding Motifs of the Arabidopsis Response Regulators
inferredcites →https://doi.org/10.1105/tpc.111.084293openalex-snapshot
BROTHER OF LUX ARRHYTHMO Is a Component of theArabidopsisCircadian Clock
inferredcites →https://doi.org/10.1105/tpc.113.111526openalex-snapshot
Arabidopsis KANADI1 Acts as a Transcriptional Repressor by Interacting with a Specific cis-Element and Regulates Auxin Biosynthesis, Transport, and Signaling in Opposition to HD-ZIPIII Factors
inferredcites →https://doi.org/10.1105/tpc.17.00810openalex-snapshot
Repression of Nitrogen Starvation Responses by Members of the Arabidopsis GARP-Type Transcription Factor NIGT1/HRS1 Subfamily
inferredcites →https://doi.org/10.1111/j.1365-313x.2004.02055.xopenalex-snapshot
ABA activates ADPR cyclase and cADPR induces a subset of ABA‐responsive genes in Arabidopsis
inferredcites →https://doi.org/10.1111/j.1365-313x.2006.02868.xopenalex-snapshot
Members of the Arabidopsis AtTPK/KCO family form homomeric vacuolar channels in planta
inferredcites →https://doi.org/10.1111/j.1467-7652.2010.00525.xopenalex-snapshot
A new dominant Arabidopsis transparent testa mutant, sk21-D, and modulation of seed flavonoid biosynthesis by KAN4
inferredcites →https://doi.org/10.1111/j.1467-7652.2010.00578.xopenalex-snapshot
Generation of chimeric repressors that confer salt tolerance in Arabidopsis and rice
inferredcites →https://doi.org/10.1111/j.1467-7652.2012.00700.xopenalex-snapshot
Engineering nitrogen use efficient crop plants: the current status
inferredcites →https://doi.org/10.1111/j.1744-7909.2009.00819.xopenalex-snapshot
Overexpressing HRS1 Confers Hypersensitivity to Low Phosphate‐Elicited Inhibition of Primary Root Growth in Arabidopsis thaliana
inferredcites →https://doi.org/10.1111/nph.16627openalex-snapshot
Gene regulatory network and its constituent transcription factors that control nitrogen‐deficiency responses in rice
inferredcites →https://doi.org/10.1111/pce.13689openalex-snapshot
Comparative genome and transcriptome analysis unravels key factors of nitrogen use efficiency in Brassica napus L
inferredcites →https://doi.org/10.1111/ppl.13375openalex-snapshot
Drought tolerance in Brassica napus is accompanied with enhanced antioxidative protection, photosynthetic and hormonal regulation at seedling stage
inferredcites →https://doi.org/10.1111/ppl.13696openalex-snapshot
Role of the type‐B authentic response regulator gene family in fragrant rice under alkaline salt stress
inferredcites →https://doi.org/10.1111/tpj.14637openalex-snapshot
Nitrate‐inducible NIGT1 proteins modulate phosphate uptake and starvation signalling via transcriptional regulation of SPX genes
inferredcites →https://doi.org/10.1126/science.1253435openalex-snapshot
Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome
inferredcites →https://doi.org/10.1126/science.290.5499.2105openalex-snapshot
Arabidopsis Transcription Factors: Genome-Wide Comparative Analysis Among Eukaryotes
inferredcites →https://doi.org/10.1146/annurev-arplant-050718-100334openalex-snapshot
MicroRNAs and Their Regulatory Roles in Plant–Environment Interactions
inferredcites →https://doi.org/10.1186/1471-2105-12-323openalex-snapshot
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
inferredcites →https://doi.org/10.1186/1471-2229-12-220openalex-snapshot
miRNA164-directed cleavage of ZmNAC1 confers lateral root development in maize (Zea maysL.)
inferredcites →https://doi.org/10.1186/1471-2229-4-10openalex-snapshot
The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana
inferredcites →https://doi.org/10.1186/gb-2010-11-12-r123openalex-snapshot
Predictive network modeling of the high-resolution dynamic plant transcriptome in response to nitrate
inferredcites →https://doi.org/10.1186/s12864-021-07862-1openalex-snapshot
Genome-wide analysis and expression patterns of lipid phospholipid phospholipase gene family in Brassica napus L.
inferredcites →https://doi.org/10.1186/s12870-018-1462-7openalex-snapshot
OsPHR3 affects the traits governing nitrogen homeostasis in rice
inferredcites →https://doi.org/10.1186/s12870-020-02367-7openalex-snapshot
Genome-wide identification of the amino acid permease genes and molecular characterization of their transcriptional responses to various nutrient stresses in allotetraploid rapeseed
inferredcites →https://doi.org/10.1186/s12870-021-03136-wopenalex-snapshot
Integrated ionomic and transcriptomic dissection reveals the core transporter genes responsive to varying cadmium abundances in allotetraploid rapeseed
inferredcites →https://doi.org/10.1186/s12870-022-03696-5openalex-snapshot
Identification and expression analysis of GARP superfamily genes in response to nitrogen and phosphorus stress in Spirodela polyrhiza
inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
inferredcites →https://doi.org/10.1371/journal.pcbi.1000326openalex-snapshot
A Systems Approach Uncovers Restrictions for Signal Interactions Regulating Genome-wide Responses to Nutritional Cues in Arabidopsis
inferredcites →https://doi.org/10.1371/journal.pgen.1001102openalex-snapshot
A Central Regulatory System Largely Controls Transcriptional Activation and Repression Responses to Phosphate Starvation in Arabidopsis
inferredcites →https://doi.org/10.1371/journal.pone.0035764openalex-snapshot
HRS1 Acts as a Negative Regulator of Abscisic Acid Signaling to Promote Timely Germination of Arabidopsis Seeds
inferredcites →https://doi.org/10.1371/journal.pone.0073541openalex-snapshot
The Suppression of WRKY44 by GIGANTEA-miR172 Pathway Is Involved in Drought Response of Arabidopsis thaliana
inferredcites →https://doi.org/10.1371/journal.pone.0161763openalex-snapshot
Molecular Evolution and Genetic Variation of G2-Like Transcription Factor Genes in Maize
inferredcites →https://doi.org/10.16288/j.yczz.2015.01.013openalex-snapshot
MapGene2Chrom, a tool to draw gene physical map based on Perl and SVG languages.
inferredcites →https://doi.org/10.3389/fpls.2014.00022openalex-snapshot
Systems analysis of transcriptome data provides new hypotheses about Arabidopsis root response to nitrate treatments
inferredcites →https://doi.org/10.3389/fpls.2021.663118openalex-snapshot
Genome-Wide Identification of Wheat WRKY Gene Family Reveals That TaWRKY75-A Is Referred to Drought and Salt Resistances
inferredcites →https://doi.org/10.3389/fpls.2021.748146openalex-snapshot
Genome-Wide Identification of Wheat ZIP Gene Family and Functional Characterization of the TaZIP13-B in Plants
inferredcites →https://doi.org/10.3389/fpls.2021.759312openalex-snapshot
GhGLK1 a Key Candidate Gene From GARP Family Enhances Cold and Drought Stress Tolerance in Cotton
inferredcites →https://doi.org/10.3389/fpls.2022.947072openalex-snapshot
Genome-Wide Identification and Characterization of GARP Transcription Factor Gene Family Members Reveal Their Diverse Functions in Tea Plant (Camellia sinensis)
inferredcites →https://doi.org/10.3390/antiox10081182openalex-snapshot
Genome-Wide Analysis and Expression Profile of Superoxide Dismutase (SOD) Gene Family in Rapeseed (Brassica napus L.) under Different Hormones and Abiotic Stress Conditions
inferredcites →https://doi.org/10.3390/ijms21228453openalex-snapshot
Genome-Wide Differential DNA Methylation and miRNA Expression Profiling Reveals Epigenetic Regulatory Mechanisms Underlying Nitrogen-Limitation-Triggered Adaptation and Use Efficiency Enhancement in Allotetraploid Rapeseed
inferredcites →https://doi.org/10.3390/ijms22084281openalex-snapshot
Catalase (CAT) Gene Family in Rapeseed (Brassica napus L.): Genome-Wide Analysis, Identification, and Expression Pattern in Response to Multiple Hormones and Abiotic Stress Conditions
inferredcites →https://doi.org/10.3390/ijms22147396openalex-snapshot
Genome-Wide Identification and Characterization of PIN-FORMED (PIN) Gene Family Reveals Role in Developmental and Various Stress Conditions in Triticum aestivum L.
inferredcites →https://doi.org/10.3390/ijms22168685openalex-snapshot
Plant NIGT1/HRS1/HHO Transcription Factors: Key Regulators with Multiple Roles in Plant Growth, Development, and Stress Responses
inferredcites →https://doi.org/10.3390/ijms221910367openalex-snapshot
Genome-Wide Identification, Evolution, and Comparative Analysis of B-Box Genes in Brassica rapa, B. oleracea, and B. napus and Their Expression Profiling in B. rapa in Response to Multiple Hormones and Abiotic Stresses
inferredcites →https://doi.org/10.3390/ijms23105784openalex-snapshot
Metabolic Profiles Reveal Changes in the Leaves and Roots of Rapeseed (Brassica napus L.) Seedlings under Nitrogen Deficiency
inferredcites →https://doi.org/10.3390/plants11040496openalex-snapshot
Genome-Wide Analysis and Characterization of the Proline-Rich Extensin-like Receptor Kinases (PERKs) Gene Family Reveals Their Role in Different Developmental Stages and Stress Conditions in Wheat (Triticum aestivum L.)
inferredcites →https://doi.org/10.3390/plants11050711openalex-snapshot
Genome-Wide Identification and Expression Analysis of SNARE Genes in Brassica napus
inferredcites →https://doi.org/10.7717/peerj.12007openalex-snapshot
Genome-scale identification of plant defensin ( PDF ) family genes and molecular characterization of their responses to diverse nutrient stresses in allotetraploid rapeseed
inferredcites →https://doi.org/10.7717/peerj.12484openalex-snapshot
Identification of the Golden-2-like transcription factors gene family in Gossypium hirsutum

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4480360openalex-extracted
Synergism of Vesicle Trafficking and Cytoskeleton During Regulation of Plant Growth and Development: A Mechanistic Outlook
inferred← citeshttps://doi.org/10.1007/s00122-024-04560-wopenalex-snapshot
Pectin demethylation-mediated cell wall Na+ retention positively regulates salt stress tolerance in oilseed rape
inferred← citeshttps://doi.org/10.1016/j.heliyon.2023.e21976openalex-snapshot
RETRACTED: Synergism of vesicle trafficking and cytoskeleton during regulation of plant growth and development: A mechanistic outlook
inferred← citeshttps://doi.org/10.1016/j.plantsci.2024.112383openalex-snapshot
Identification and characterization of ClAPRR2, a key candidate gene controlling watermelon stripe color
inferred← citeshttps://doi.org/10.1038/s41598-025-33983-8openalex-snapshot
Gene regulatory and co-expression networks reveal novel hub genes and regulatory mechanisms in rapeseed (Brassica napus L.) under drought stress
inferred← citeshttps://doi.org/10.1186/s12870-025-07423-8openalex-snapshot
Genome-wide identification and expression analysis of the GARP superfamily in response to abiotic stresses in alfalfa (Medicago sativa L.)
inferred← citeshttps://doi.org/10.3390/agriculture14122109openalex-snapshot
Genome-Wide Identification and Exogenous Hormone and Stress Response Expression Analysis of the GARP Gene Family in Soybean (Glycine max)
inferred← citeshttps://doi.org/10.3390/genes16030322openalex-snapshot
Genome-Wide Identification and Comprehensive Analysis of the GARP Transcription Factor Superfamily in Populus deltoides
inferred← citeshttps://doi.org/10.3390/ijms24076708openalex-snapshot
Alternative Splicing: From Abiotic Stress Tolerance to Evolutionary Genomics
inferred← citeshttps://doi.org/10.3390/ijms25136968openalex-snapshot
Overexpression of Liriodendron Hybrid LhGLK1 in Arabidopsis Leads to Excessive Chlorophyll Synthesis and Improved Growth
inferred← citeshttps://doi.org/10.3390/ijms26062387openalex-snapshot
Genome-Wide Identification of GLK Family Genes in Phoebe bournei and Their Transcriptional Analysis Under Abiotic Stresses
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.