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Phylogeny and Evolutionary Timescale of Muscidae (Diptera: Calyptratae) Inferred from Mitochondrial Genomes

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/2014pa002670openalex-snapshot

The middle Eocene climatic optimum (MECO): A multiproxy record of paleoceanographic changes in the southeast Atlantic (ODP Site 1263, Walvis Ridge)

inferredcites →https://doi.org/10.1007/s00414-016-1495-0openalex-snapshot

Muscidae (Diptera) of forensic importance—an identification key to third instar larvae of the western Palaearctic region and a catalogue of the muscid carrion community

inferredcites →https://doi.org/10.1007/s00414-021-02543-wopenalex-snapshot

Review of Synthesiomyia nudiseta (Diptera: Muscidae) as a useful tool in forensic entomology

inferredcites →https://doi.org/10.1007/s00436-018-5925-4openalex-snapshot

Comparative analyses of the mitochondrial genome of the sheep ked Melophagus ovinus (Diptera: Hippoboscidae) from different geographical origins in China

inferredcites →https://doi.org/10.1016/0305-1978(92)90044-eopenalex-snapshot

Mitochondrial tRNA and the phylogenetic position of nematoda

inferredcites →https://doi.org/10.1016/j.aspen.2018.08.009openalex-snapshot

Complete mitochondrial genome of a forensically important muscid, Hydrotaea chalcogaster (Diptera: Muscidae), with notes on its phylogenetic position

inferredcites →https://doi.org/10.1016/j.aspen.2018.11.009openalex-snapshot

Characterization of the complete mitochondrial genome of Hydrotaea spinigera (Diptera: Muscidae) with phylogenetic implications

inferredcites →https://doi.org/10.1016/j.ijbiomac.2019.01.063openalex-snapshot

Comparative analysis of mitochondrial genomes among four species of muscid flies (Diptera: Muscidae) and its phylogenetic implications

inferredcites →https://doi.org/10.1016/j.ijbiomac.2020.06.043openalex-snapshot

Comparative analysis of mitochondrial genomes among the subfamily Sarcophaginae (Diptera: Sarcophagidae) and phylogenetic implications

inferredcites →https://doi.org/10.1016/j.meegid.2011.02.004openalex-snapshot

Phylogenetic analyses of mitochondrial and nuclear data in haematophagous flies support the paraphyly of the genus Stomoxys (Diptera: Muscidae)

inferredcites →https://doi.org/10.1016/j.scitotenv.2021.151483openalex-snapshot

Musca domestica (Diptera: Muscidae) as a biological model for the assessment of magnetite nanoparticles toxicity

inferredcites →https://doi.org/10.1016/j.ympev.2004.03.009openalex-snapshot

The mitochondrial genome of the firefly, Pyrocoelia rufa: complete DNA sequence, genome organization, and phylogenetic analysis with other insects

inferredcites →https://doi.org/10.1016/j.ympev.2008.08.012openalex-snapshot

The Muscoidea (Diptera: Calyptratae) are paraphyletic: Evidence from four mitochondrial and four nuclear genes

inferredcites →https://doi.org/10.1016/j.ympev.2014.05.027openalex-snapshot

Complete tribal sampling reveals basal split in Muscidae (Diptera), confirms saprophagy as ancestral feeding mode, and reveals an evolutionary correlation between instar numbers and carnivory

inferredcites →https://doi.org/10.1016/j.ympev.2015.04.006openalex-snapshot

Say goodbye to tribes in the new house fly classification: A new molecular phylogenetic analysis and an updated biogeographical narrative for the Muscidae (Diptera)

inferredcites →https://doi.org/10.1017/s0031182006001089openalex-snapshot

The life-cycle of Philornis downsi (Diptera: Muscidae) parasitizing Darwin's finches and its impacts on nestling survival

inferredcites →https://doi.org/10.1038/nature06588openalex-snapshot

An early Cenozoic perspective on greenhouse warming and carbon-cycle dynamics

inferredcites →https://doi.org/10.1038/srep20972openalex-snapshot

Comparative and phylogenetic analysis of the mitochondrial genomes in basal hymenopterans

inferredcites →https://doi.org/10.1038/srep21762openalex-snapshot

Large-scale mitogenomics enables insights into Schizophora (Diptera) radiation and population diversity

inferredcites →https://doi.org/10.1051/parasite/2013026openalex-snapshot

Transmission of pathogens by Stomoxys flies (Diptera, Muscidae): a review

inferredcites →https://doi.org/10.1071/is06026openalex-snapshot

Molecular phylogenetics of the Muscidae (Diptera : Calyptratae): new ideas in a congruence context

inferredcites →https://doi.org/10.1080/23802359.2017.1289352openalex-snapshot

Sequencing and analyzing complete mitochondrial DNA of Muscina angustifrons (Insecta, Diptera, Muscidae)

inferredcites →https://doi.org/10.1080/23802359.2017.1407703openalex-snapshot

Complete mitochondrial DNA analysis of Hydrotaea ignava (Insecta, Diptera, Muscidae)

inferredcites →https://doi.org/10.1080/23802359.2018.1450677openalex-snapshot

The complete mitochondrial genome of the bazaar fly, Musca sorbens Wiedemann (Diptera: Muscidae)

inferredcites →https://doi.org/10.1080/23802359.2018.1456375openalex-snapshot

The complete mitochondrial genome of Graphomya rufitibia (Diptera: Muscidae)

inferredcites →https://doi.org/10.1080/23802359.2018.1507637openalex-snapshot

The complete mitochondrial genome of Hydrotaea (Ophyra) chalcogaster (Diptera: Muscidae)

inferredcites →https://doi.org/10.1080/23802359.2019.1618217openalex-snapshot

The complete mitochondrial genome of Hydrotaea dentipes (Diptera: Muscidae)

inferredcites →https://doi.org/10.1080/23802359.2019.1623103openalex-snapshot

The mitochondrial genome of Formicosepsis sp. (Diptera: Cypselosomatidae)

inferredcites →https://doi.org/10.1080/23802359.2020.1848473openalex-snapshot

The complete mitochondrial genome of Muscina pascuorum (Diptera: Muscidae)

inferredcites →https://doi.org/10.1093/bioinformatics/btm573openalex-snapshot

ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences

inferredcites →https://doi.org/10.1093/bioinformatics/bts199openalex-snapshot

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

inferredcites →https://doi.org/10.1093/gbe/evw086openalex-snapshot

Capturing the Phylogeny of Holometabola with Mitochondrial Genome Data and Bayesian Site-Heterogeneous Mixture Models

inferredcites →https://doi.org/10.1093/jmedent/35.4.591openalex-snapshot

Blood-Feeding Strategy of Haematobia irritans (Diptera: Muscidae)

inferredcites →https://doi.org/10.1093/molbev/msm088openalex-snapshot

PAML 4: Phylogenetic Analysis by Maximum Likelihood

inferredcites →https://doi.org/10.1093/molbev/mst010openalex-snapshot

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

inferredcites →https://doi.org/10.1093/molbev/mst024openalex-snapshot

Ultrafast Approximation for Phylogenetic Bootstrap

inferredcites →https://doi.org/10.1093/molbev/msu300openalex-snapshot

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

inferredcites →https://doi.org/10.1093/molbev/msw260openalex-snapshot

PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses

inferredcites →https://doi.org/10.1093/molbev/msz240openalex-snapshot

Treeio: An R Package for Phylogenetic Tree Input and Output with Richly Annotated and Associated Data

inferredcites →https://doi.org/10.1093/nar/27.8.1767openalex-snapshot

Animal mitochondrial genomes

inferredcites →https://doi.org/10.1093/nar/gkab301openalex-snapshot

Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

inferredcites →https://doi.org/10.1093/nar/gkw413openalex-snapshot

tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes

inferredcites →https://doi.org/10.1093/nar/gkz833openalex-snapshot

Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026334openalex-snapshot

Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis

inferredcites →https://doi.org/10.1093/sysbio/syq010openalex-snapshot

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

inferredcites →https://doi.org/10.1111/1755-0998.13096openalex-snapshot

PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

inferredcites →https://doi.org/10.1111/2041-210x.12628openalex-snapshot

ggtree : an r package for visualization and annotation of phylogenetic trees with their covariates and other associated data

inferredcites →https://doi.org/10.1111/cla.12375openalex-snapshot

Phylogenomic analysis of Calyptratae: resolving the phylogenetic relationships within a major radiation of Diptera

inferredcites →https://doi.org/10.1111/j.1365-3113.2006.00355.xopenalex-snapshot

A mitochondrial genome phylogeny of Diptera: whole genome sequence data accurately resolve relationships over broad timescales with high precision

inferredcites →https://doi.org/10.1111/j.1365-3113.2008.00440.xopenalex-snapshot

A molecular phylogeny of the tribe Aphidini (Insecta: Hemiptera: Aphididae) based on the mitochondrial tRNA/COII, 12S/16S and the nuclear EF1α genes

inferredcites →https://doi.org/10.1111/j.1365-3113.2010.00536.xopenalex-snapshot

Molecular phylogeny of the Calyptratae (Diptera: Cyclorrhapha) with an emphasis on the superfamily Oestroidea and the position of Mystacinobiidae and McAlpine's fly

inferredcites →https://doi.org/10.1111/jbi.13835openalex-snapshot

Neotropical endemism and dispersal events between tropical and extra‐tropical regions underlay the reticulate assemblages of muscid flies

inferredcites →https://doi.org/10.1111/syen.12071openalex-snapshot

How to sequence and annotate insect mitochondrial genomes for systematic and comparative genomics research

inferredcites →https://doi.org/10.1111/syen.12240openalex-snapshot

To be or not to be a valid genus: the systematic position of Ophyra R.‐D. revised (Diptera: Muscidae)

inferredcites →https://doi.org/10.1111/syen.12473openalex-snapshot

Towards a new classification of Muscidae (Diptera): a comparison of hypotheses based on multiple molecular phylogenetic approaches

inferredcites →https://doi.org/10.1130/g19800.1openalex-snapshot

Significant Southern Ocean warming event in the late middle Eocene

inferredcites →https://doi.org/10.1146/annurev-ento-011613-162007openalex-snapshot

Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny

inferredcites →https://doi.org/10.11646/zootaxa.860.1.1openalex-snapshot

A Catalogue of the Muscidae (Diptera) of the Neotropical Region

inferredcites →https://doi.org/10.1371/journal.pone.0047302openalex-snapshot

The First Mitochondrial Genome for the Fishfly Subfamily Chauliodinae and Implications for the Higher Phylogeny of Megaloptera

inferredcites →https://doi.org/10.1371/journal.pone.0134170openalex-snapshot

The Phylogeny and Evolutionary Timescale of Muscoidea (Diptera: Brachycera: Calyptratae) Inferred from Mitochondrial Genomes

inferredcites →https://doi.org/10.1371/journal.pone.0139736openalex-snapshot

The Complete Mitochondrial Genome of Delia antiqua and Its Implications in Dipteran Phylogenetics

inferredcites →https://doi.org/10.1590/s0101-81751989000400009openalex-snapshot

Classificação de Muscidae (Diptera): uma proposta através da análise cladístical

inferredcites →https://doi.org/10.1590/s1519-69842003000200007openalex-snapshot

Systematic relations among Philornis Meinert, Passeromyia Rodhain & Villeneuve and allied genera (Diptera, Muscidae)

inferredcites →https://doi.org/10.3109/19401736.2013.879651openalex-snapshot

The complete mitochondrial genome of the scuttle fly, Megaselia scalaris (Diptera: Phoridae)

inferredcites →https://doi.org/10.3109/19401736.2014.1003847openalex-snapshot

The complete mitochondrial genome of the flesh fly, Muscina stabulans (Diptera: muscidae)

inferredcites →https://doi.org/10.3109/19401736.2014.953080openalex-snapshot

The complete mitochondrial genomes of Musca domestica and Scathophaga stercoraria (Diptera: Muscoidea: Muscidae and Scathophagidae)

inferredcites →https://doi.org/10.3897/asp.80.e78173openalex-snapshot

Two complete mitochondrial genomes of the subfamily Chloroperlinae (Plecoptera: Chloroperlidae) and their phylogenetic implications

inferredcites →https://doi.org/10.3897/zookeys.975.55502openalex-snapshot

The position of the Azeliinae in the Muscidae (Diptera) based on musculature of the male terminalia

inferredcites →https://doi.org/10.3923/pjbs.2021.42.52openalex-snapshot

Evaluation of the Toxic Effects of Novaluron on Muscina stabulans (Fallen) (Diptera: Muscidae)

inferredcites →https://doi.org/10.5281/zenodo.16283461openalex-snapshot

Vorarbeiten zu einem phylogenetischen System der Muscidae (Diptera: Cyclorrhapha)

inferredcites →https://doi.org/10.53022/oarjms.2021.2.1.0051openalex-snapshot

Study of the biology and ecology of the Muscidae Family (Insecta: Diptera): Collections

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/zootaxa.5297.2.9zenodo-depositor-declared

An introduced species, though remarkable: first record of Sepsidae (Diptera: Schizophora) from Chile

inferred← citeshttps://doi.org/10.3897/asp.83.e144844zenodo-depositor-declared

A new perspective on the phylogeny of Polietina Schnabl & Dziedzicki (Diptera: Muscidae): integrating morphological and molecular evidence

inferred← citeshttps://doi.org/10.1080/00379271.2023.2222026openalex-snapshot

Clarifying the taxonomic status and exploring hidden diversity in Graphomya minor Robineau-Desvoidy, 1830 (Diptera: Muscidae: Mydaeinae) using molecular and morphological evidence

inferred← citeshttps://doi.org/10.1080/23802359.2026.2694129openalex-snapshot

The mitochondrial genome of Helina trivittata (Diptera: Muscidae) and its phylogenetic analysis

inferred← citeshttps://doi.org/10.1080/23802359.2026.2742598openalex-snapshot

The complete mitochondrial genome of Neomyia gavisa (Walker, 1859) (Diptera: Muscidae)

inferred← citeshttps://doi.org/10.3390/genes17020142openalex-snapshot

Phylogeny and Underground Adaptation of Eulipotyphla Revealed by Whole Genome Comparison Phylogeny and Adaptation of Eulipotyphla

inferred← citeshttps://doi.org/10.3390/insects15080574openalex-snapshot

Sensillar Ultrastructure of the Antennae and Maxillary Palps of the Warble Fly Oestromyia leporina (Pallas, 1778) (Diptera: Oestridae)

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