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High Mutation Frequency and Significant Population Differentiation in Papaya Ringspot Virus-W Isolates

https://doi.org/10.3390/pathogens10101278

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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A Single Conserved Amino Acid in the Coat Protein Gene of Pea Seed-Borne Mosaic Potyvirus Modulates the Ability of the Virus to Move Systemically inChenopodium quinoa

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Plant Virus Evolution

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Potyvirus aphid transmission requires helper component and homologous coat protein for maximal efficiency

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Coat protein sequence comparisons of three Mexican isolates of papaya ringspot virus with other geographical isolates reveal a close relationship to American and Australian isolates

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Molecular characterization of a severe isolate of papaya ringspot virus in Mexico and its relationship with other isolates

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Iranian johnsongrass mosaic virus: the complete genome sequence, molecular and biological characterization, and comparison of coat protein gene sequences

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Genetic Diversity Based on Coat Protein of Papaya ringspot virus (Pathotype P) Isolates from Bangladesh

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Epidemiology and evolution of poytviruses infecting cucurbits

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Molecular Biology of Potyviruses

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The occurrence and distribution of major viruses infecting cucurbits in Tamil Nadu state, India

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Aphids as transport devices for plant viruses

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More effective purifying selection on RNA viruses than in DNA viruses

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Genetic bottlenecks during systemic movement of Cucumber mosaic virus vary in different host plants

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The population genetics and evolutionary epidemiology of RNA viruses

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Experimental evolution of plant RNA viruses

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An overlapping essential gene in the Potyviridae

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Mutation rates among RNA viruses

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Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

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Statistical tests of neutrality of mutations.

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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

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The Evolution and Emergence of RNA Viruses

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A statistical test for detecting geographic subdivision.

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Analysis of quasispecies variation in single and mixed viral infection

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Diverse Amino Acid Changes at Specific Positions in the N-Terminal Region of the Coat Protein Allow Plum pox virus to Adapt to New Hosts

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A Single Amino Acid of NIaPro of Papaya ringspot virus Determines Host Specificity for Infection of Papaya

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Distribution of Viruses Infecting Cucurbit Crops and Isolation of Potential New Virus-Like Sequences from Weeds in Oklahoma

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Complete Genome Characterization and Coat Protein Genealogy of Isolates ofMaize dwarf mosaic virusfrom Johnsongrass and Maize in Oklahoma and Missouri

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Papaya ringspot virus Populations From East Timorese and Northern Australian Cucurbit Crops: Biological and Molecular Properties, and Absence of Genetic Connectivity

inferredcites →https://doi.org/10.1094/pdis-10-17-1675-pdnopenalex-snapshot

First Report of Cucurbit aphid-borne yellows virus Infecting Cucurbita pepo in Oklahoma

inferredcites →https://doi.org/10.1094/pdis.2000.84.5.516openalex-snapshot

Occurrence, Distribution, and Relative Incidence of Five Viruses Infecting Cucurbits in the State of São Paulo, Brazil

inferredcites →https://doi.org/10.1094/phi-i-2010-1004-01openalex-snapshot

Papaya Ringspot Virus

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Population Genetic Analysis of Tomato spotted wilt virus on Peanut in North Carolina and Virginia

inferredcites →https://doi.org/10.1098/rspb.2014.0732openalex-snapshot

Analyses of evolutionary dynamics in viruses are hindered by a time-dependent bias in rate estimates

inferredcites →https://doi.org/10.1099/0022-1317-75-6-1407openalex-snapshot

Mutations in the helper component protease gene of zucchini yellow mosaic virus affect its ability to mediate aphid transmissibility

inferredcites →https://doi.org/10.1099/0022-1317-76-2-265openalex-snapshot

Mutational analysis of the coat protein N-terminal amino acids involved in potyvirus transmission by aphids

inferredcites →https://doi.org/10.1099/0022-1317-77-6-1329openalex-snapshot

Biological and molecular properties of a pathotype P-1 and a pathotype P-4 isolate of pea seed-borne mosaic virus

inferredcites →https://doi.org/10.1099/0022-1317-79-12-3119openalex-snapshot

Mutations in the potyvirus helper component protein: effects on interactions with virions and aphid stylets.

inferredcites →https://doi.org/10.1099/0022-1317-80-12-3281openalex-snapshot

Context of the coat protein DAG motif affects potyvirus transmissibility by aphids

inferredcites →https://doi.org/10.1099/jgv.0.000740openalex-snapshot

ICTV Virus Taxonomy Profile: Potyviridae

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Genetic diversity and population structure of rice stripe virus in China

inferredcites →https://doi.org/10.1111/aab.12029openalex-snapshot

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inferredcites →https://doi.org/10.1111/j.1364-3703.2004.00240.xopenalex-snapshot

Transmission of plant viruses by aphid vectors

inferredcites →https://doi.org/10.1111/j.1364-3703.2008.00467.xopenalex-snapshot

Papaya ringspot virus ‐P: characteristics, pathogenicity, sequence variability and control

inferredcites →https://doi.org/10.1111/j.1439-0434.2005.01015.xopenalex-snapshot

Incidence of Viruses Infecting Cucurbits in Cyprus

inferredcites →https://doi.org/10.1128/jvi.00568-06openalex-snapshot

Analysis of Genetic Bottlenecks during Horizontal Transmission of Cucumber Mosaic Virus

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Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase

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Evolutionarily Related Sindbis-Like Plant Viruses Maintain Different Levels of Population Diversity in a Common Host

inferredcites →https://doi.org/10.1128/jvi.75.14.6566-6571.2001openalex-snapshot

Genetic Diversity in RNA Virus Quasispecies Is Controlled by Host-Virus Interactions

inferredcites →https://doi.org/10.1128/mra.01448-18openalex-snapshot

First Complete Genome Sequence of Cucurbit Aphid-Borne Yellows Virus from Pumpkin in the United States

inferredcites →https://doi.org/10.1128/mra.01583-18openalex-snapshot

Complete Genome Sequence of a Zucchini Yellow Mosaic Virus Isolated from Pumpkin in Oklahoma

inferredcites →https://doi.org/10.1146/annurev.micro.51.1.151openalex-snapshot

RNA VIRUS MUTATIONS AND FITNESS FOR SURVIVAL

inferredcites →https://doi.org/10.1146/annurev.phyto.39.1.157openalex-snapshot

V ARIABILITY AND G ENETIC S TRUCTURE OF P LANT V IRUS P OPULATIONS

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E VOLUTION OF W HEAT S TREAK M OSAIC V IRUS : Dynamics of Population Growth Within Plants May Explain Limited Variation

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Accumulating Variation at Conserved Sites in Potyvirus Genomes Is Driven by Species Discovery and Affects Degenerate Primer Design

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Análise comparativa da região codificadora para a proteína capsidial de isolados de PepYMV e PVY coletados em pimentão

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Characterization of a new potyvirus causing mosaic and flower variegation in Catharanthus roseus in Brazil

inferredcites →https://doi.org/10.21273/hortsci.38.1.65openalex-snapshot

Viruses Associated with Cucurbit Production in Southern Illinois

inferredcites →https://doi.org/10.2174/092986608785849164openalex-snapshot

TOP-IDP-Scale: A New Amino Acid Scale Measuring Propensity for Intrinsic Disorder

inferredcites →https://doi.org/10.3389/fpls.2019.01439openalex-snapshot

Genome-Wide Variation in Potyviruses

inferredcites →https://doi.org/10.3389/fpls.2020.01092openalex-snapshot

Detection of Plant Viruses and Disease Management: Relevance of Genetic Diversity and Evolution

inferredcites →https://doi.org/10.3390/pathogens10010053openalex-snapshot

High Prevalence of Three Potyviruses Infecting Cucurbits in Oklahoma and Phylogenetic Analysis of Cucurbit Aphid-Borne Yellows Virus Isolated from Pumpkins

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Viruses of cucurbits in Panama.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1007/s10341-024-01055-2openalex-snapshot

Molecular Detection of Papaya ringspot virus and Associated Complexities in Papaya and Cucurbits

inferred← citeshttps://doi.org/10.1007/s13337-026-00955-zopenalex-snapshot

Field surveys and diversity analysis of papaya ringspot virus in Telangana and Andhra Pradesh, India, based on the coat protein gene

inferred← citeshttps://doi.org/10.1016/b978-0-323-95339-9.00014-4openalex-snapshot

Ecology and evolution of papaya ringspot virus

inferred← citeshttps://doi.org/10.1016/j.virusres.2024.199397openalex-snapshot

Cassava brown streak virus evolves with a nucleotide-substitution rate that is typical for the family Potyviridae

inferred← citeshttps://doi.org/10.22146/ijbiotech.74104openalex-snapshot

The efficacy of a chicken antibody for the development of immunoassay‐based rapid detection in sugarcane mosaic virus disease

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