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A Global Analysis of Enzyme Compartmentalization to Glycosomes

https://doi.org/10.3390/pathogens9040281

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/pmic.200500668openalex-snapshot

Comparative proteomics of glycosomes from bloodstream form and procyclic culture form Trypanosoma brucei brucei

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Sample Preparation for Mass Spectrometry-Based Proteomics; from Proteomes to Peptides

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Euglena gracilis Genome and Transcriptome: Organelles, Nuclear Genome Assembly Strategies and Initial Features

inferredcites →https://doi.org/10.1016/0014-4894(90)90109-popenalex-snapshot

Trypanosoma brucei: Two-dimensional gel analysis of the major glycosomal proteins during the life cycle

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A novel location for two enzymes of de novo pyrimidine biosynthesis in trypanosomes and Leishmania

inferredcites →https://doi.org/10.1016/0092-8674(86)90063-2openalex-snapshot

Major transcript of the frameshifted coxll gene from trypanosome mitochondria contains four nucleotides that are not encoded in the DNA

inferredcites →https://doi.org/10.1016/0092-8674(86)90617-3openalex-snapshot

Evidence for Trans splicing in trypanosomes

inferredcites →https://doi.org/10.1016/j.biocel.2017.01.015openalex-snapshot

Glycosomes: A comprehensive view of their metabolic roles in T. brucei

inferredcites →https://doi.org/10.1016/j.chom.2016.05.002openalex-snapshot

Trypanosoma brucei Parasites Occupy and Functionally Adapt to the Adipose Tissue in Mice

inferredcites →https://doi.org/10.1016/j.femsre.2004.06.004openalex-snapshot

Biogenesis of peroxisomes and glycosomes: trypanosomatid glycosome assembly is a promising new drug target

inferredcites →https://doi.org/10.1016/j.freeradbiomed.2005.06.021openalex-snapshot

The presence of four iron-containing superoxide dismutase isozymes in Trypanosomatidae: Characterization, subcellular localization, and phylogenetic origin in Trypanosoma brucei

inferredcites →https://doi.org/10.1016/j.freeradbiomed.2005.06.022openalex-snapshot

Functional characterisation of the iron superoxide dismutase gene repertoire in Trypanosoma brucei

inferredcites →https://doi.org/10.1016/j.mib.2014.09.006openalex-snapshot

Evolution, dynamics and specialized functions of glycosomes in metabolism and development of trypanosomatids

inferredcites →https://doi.org/10.1016/j.mib.2018.11.003openalex-snapshot

Come, sweet death: targeting glycosomal protein import for antitrypanosomal drug development

inferredcites →https://doi.org/10.1016/j.molbiopara.2006.02.010openalex-snapshot

In silico prediction of the glycosomal enzymes of Leishmania major and trypanosomes

inferredcites →https://doi.org/10.1016/j.molbiopara.2014.05.007openalex-snapshot

Evolution of parasitism in kinetoplastid flagellates

inferredcites →https://doi.org/10.1016/j.molbiopara.2018.12.003openalex-snapshot

Cellular landmarks of Trypanosoma brucei and Leishmania mexicana

inferredcites →https://doi.org/10.1016/j.molbiopara.2019.02.008openalex-snapshot

Proteomic analysis of glycosomes from Trypanosoma cruzi epimastigotes

inferredcites →https://doi.org/10.1016/j.molmed.2019.09.012openalex-snapshot

Staying in Healthy Contact: How Peroxisomes Interact with Other Cell Organelles

inferredcites →https://doi.org/10.1016/j.protis.2010.11.003openalex-snapshot

Compartmentalization of a Glycolytic Enzyme in Diplonema, a Non-kinetoplastid Euglenozoan

inferredcites →https://doi.org/10.1016/j.pt.2009.07.007openalex-snapshot

Surprising variety in energy metabolism within Trypanosomatidae

inferredcites →https://doi.org/10.1016/j.pt.2016.10.009openalex-snapshot

TrypTag.org: A Trypanosome Genome-wide Protein Localisation Resource

inferredcites →https://doi.org/10.1016/s0021-9258(17)38603-9openalex-snapshot

Glycosyl-sn-1,2-dimyristylphosphatidylinositol is covalently linked to Trypanosoma brucei variant surface glycoprotein.

inferredcites →https://doi.org/10.1016/s0022-2836(03)00319-xopenalex-snapshot

Prediction of Peroxisomal Targeting Signal 1 Containing Proteins from Amino Acid Sequence

inferredcites →https://doi.org/10.1021/pr401209wopenalex-snapshot

High-Confidence Glycosome Proteome for Procyclic Form Trypanosoma brucei by Epitope-Tag Organelle Enrichment and SILAC Proteomics

inferredcites →https://doi.org/10.1038/nature11051openalex-snapshot

Cryptic peroxisomal targeting via alternative splicing and stop codon read-through in fungi

inferredcites →https://doi.org/10.1038/nature21375openalex-snapshot

Newly born peroxisomes are a hybrid of mitochondrial and ER-derived pre-peroxisomes

inferredcites →https://doi.org/10.1038/nbt.1883openalex-snapshot

Full-length transcriptome assembly from RNA-Seq data without a reference genome

inferredcites →https://doi.org/10.1038/srep23704openalex-snapshot

Genome of Leptomonas pyrrhocoris: a high-quality reference for monoxenous trypanosomatids and new insights into evolution of Leishmania

inferredcites →https://doi.org/10.1089/omi.2014.0163openalex-snapshot

Comprehensive Proteomics Analysis of Glycosomes from Leishmania donovani

inferredcites →https://doi.org/10.1093/nar/15.18.7357openalex-snapshot

Transcription of the intergenic regions of the tubulin gene cluster ofTrypanosoma brucei: evidence for a polyclstronic transcription unit in a eukaryote

inferredcites →https://doi.org/10.1093/nar/gkp851openalex-snapshot

TriTrypDB: a functional genomic resource for the Trypanosomatidae

inferredcites →https://doi.org/10.1093/nar/gkp935openalex-snapshot

PeroxisomeDB 2.0: an integrative view of the global peroxisomal metabolome

inferredcites →https://doi.org/10.1093/nar/gkq618openalex-snapshot

The Trypanosoma brucei MitoCarta and its regulation and splicing pattern during development

inferredcites →https://doi.org/10.1098/rspb.2016.0520openalex-snapshot

Differential remodelling of peroxisome function underpins the environmental and metabolic adaptability of diplonemids and kinetoplastids

inferredcites →https://doi.org/10.1101/gad.570310openalex-snapshot

A novel phosphatase cascade regulates differentiation in Trypanosoma brucei via a glycosomal signaling pathway

inferredcites →https://doi.org/10.1111/1462-2920.14041openalex-snapshot

Transformation of Diplonema papillatum , the type species of the highly diverse and abundant marine microeukaryotes Diplonemida (Euglenozoa)

inferredcites →https://doi.org/10.1111/febs.15083openalex-snapshot

Catalase compromises the development of the insect and mammalian stages of Trypanosoma brucei

inferredcites →https://doi.org/10.1111/jeu.12343openalex-snapshot

Localization of a Trypanosome Peroxin to the Endoplasmic Reticulum

inferredcites →https://doi.org/10.1111/jipb.12670openalex-snapshot

Proteome analysis of peroxisomes from dark‐treated senescent Arabidopsis leaves

inferredcites →https://doi.org/10.1128/ec.00086-13openalex-snapshot

Environmentally Regulated Glycosome Protein Composition in the African Trypanosome

inferredcites →https://doi.org/10.1128/mcb.8.9.3837openalex-snapshot

Polycistronic Transcripts in Trypanosomes and Their Accumulation During Heat Shock: Evidence for a Precursor Role in mRNA Synthesis

inferredcites →https://doi.org/10.1186/1471-2105-10-421openalex-snapshot

BLAST+: architecture and applications

inferredcites →https://doi.org/10.1186/s12864-016-2540-6openalex-snapshot

De novo assembly and comparative transcriptome analysis of Euglena gracilis in response to anaerobic conditions

inferredcites →https://doi.org/10.1186/s12915-019-0626-8openalex-snapshot

Transcriptome, proteome and draft genome of Euglena gracilis

inferredcites →https://doi.org/10.1242/jcs.146282openalex-snapshot

PEX16 contributes to peroxisome maintenance by constantly trafficking PEX3 via the ER

inferredcites →https://doi.org/10.1371/annotation/3552e5c7-88d1-42c5-844d-4c2f2d722533openalex-snapshot

Correction: The Proteome of Human Liver Peroxisomes: Identification of Five New Peroxisomal Constituents by a Label-Free Quantitative Proteomics Survey

inferredcites →https://doi.org/10.1371/journal.pcbi.1003371openalex-snapshot

Handling Uncertainty in Dynamic Models: The Pentose Phosphate Pathway in Trypanosoma brucei

inferredcites →https://doi.org/10.1371/journal.pone.0057395openalex-snapshot

The Proteome of Human Liver Peroxisomes: Identification of Five New Peroxisomal Constituents by a Label-Free Quantitative Proteomics Survey

inferredcites →https://doi.org/10.1371/journal.pone.0168912openalex-snapshot

PPero, a Computational Model for Plant PTS1 Type Peroxisomal Protein Prediction

inferredcites →https://doi.org/10.1371/journal.pone.0215160openalex-snapshot

Conserved motifs in nuclear genes encoding predicted mitochondrial proteins in Trypanosoma cruzi

inferredcites →https://doi.org/10.1534/genetics.112.141267openalex-snapshot

Mitochondrial Protein Synthesis, Import, and Assembly

inferredcites →https://doi.org/10.4161/auto.5443openalex-snapshot

Turnover of glycosomes during life-cycle differentiation ofTrypanosoma brucei

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4765087openalex-extracted

Cross-Species Role of Pip39 in Oxidative Stress Response in Kinetoplastids

inferred← citeshttps://doi.org/10.1016/j.biochi.2022.08.006openalex-snapshot

Molecular explorations of the Leishmania donovani 6-phosphogluconolactonase enzyme, a key player in the pentose phosphate pathway

inferred← citeshttps://doi.org/10.1016/j.micres.2021.126830openalex-snapshot

Functional characterization of the LdNAGD gene in Leishmania donovani

inferred← citeshttps://doi.org/10.1016/j.molbiopara.2024.111620openalex-snapshot

Role of PIP39 in oxidative stress response appears conserved in kinetoplastids

inferred← citeshttps://doi.org/10.1016/j.pt.2020.10.001openalex-snapshot

Reductionist Pathways for Parasitism in Euglenozoans? Expanded Datasets Provide New Insights

inferred← citeshttps://doi.org/10.1016/j.synbio.2023.09.002openalex-snapshot

Improving pathway prediction accuracy of constraints-based metabolic network models by treating enzymes as microcompartments

inferred← citeshttps://doi.org/10.1098/rsob.200302openalex-snapshot

Phosphoglycerate kinase: structural aspects and functions, with special emphasis on the enzyme from Kinetoplastea

inferred← citeshttps://doi.org/10.1101/2022.12.14.520512openalex-snapshot

The necessity of considering enzymes as compartments in constraint-based genome-scale metabolic models

inferred← citeshttps://doi.org/10.1111/jeu.12897openalex-snapshot

Biogenesis and metabolic homeostasis of trypanosomatid glycosomes: New insights and new questions

inferred← citeshttps://doi.org/10.1371/journal.pntd.0013479openalex-snapshot

Glycosomal ABC transporter 3 (GAT3) deletion enhances the oxidative stress responses and reduces the infectivity of Trypanosoma cruzi

inferred← citeshttps://doi.org/10.1515/hsz-2025-0183openalex-snapshot

Recent advances in glycosome biogenesis and its implications for drug discovery

inferred← citeshttps://doi.org/10.3389/fcell.2022.979269openalex-snapshot

Delineating transitions during the evolution of specialised peroxisomes: Glycosome formation in kinetoplastid and diplonemid protists

inferred← citeshttps://doi.org/10.3389/fpara.2026.1823935openalex-snapshot

Cross-species comparisons in a unified medium suggest broadly stable glycosome-linked enzyme levels under nutrient and oxygen variation

inferred← citeshttps://doi.org/10.70675/0dec7cdaz18dez40d1zbbccz79acdd29502aopenalex-snapshot

Étude des phospholipases du trypanosome africain

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