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Phylogenomics and Systematics of Overlooked Mesoamerican and South American Polyploid Broad-Leaved Festuca Grasses Differentiate F. sects. Glabricarpae and Ruprechtia and F. subgen. Asperifolia, Erosiflorae, Mallopetalon and Coironhuecu (subgen. nov.)

https://doi.org/10.3390/plants11172303
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Phylogeny and Evolution of the Genus Brachypodium
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Emerging technologies advancing forage and turf grass genomics
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The Evolutionary Consequences of Polyploidy
inferredcites →https://doi.org/10.1016/j.ympev.2003.08.025openalex-snapshot
Phylogeny of the festucoid grasses of subtribe Loliinae and allies (Poeae, Pooideae) inferred from ITS and trnL–F sequences
inferredcites →https://doi.org/10.1016/j.ympev.2007.11.022openalex-snapshot
Dated historical biogeography of the temperate Loliinae (Poaceae, Pooideae) grasses in the northern and southern hemispheres
inferredcites →https://doi.org/10.1017/cbo9780511819049.010openalex-snapshot
Phylogeny inference based on parsimony and other methods using PAUP
inferredcites →https://doi.org/10.1038/nature09916openalex-snapshot
Ancestral polyploidy in seed plants and angiosperms
inferredcites →https://doi.org/10.1038/nmeth.4285openalex-snapshot
ModelFinder: fast model selection for accurate phylogenetic estimates
inferredcites →https://doi.org/10.1038/nrg2600openalex-snapshot
The evolutionary significance of ancient genome duplications
inferredcites →https://doi.org/10.1038/s41596-020-0400-yopenalex-snapshot
Global analysis of repetitive DNA from unassembled sequence reads using RepeatExplorer2
inferredcites →https://doi.org/10.1043/0363-6445-27.2.241openalex-snapshot
Phylogeny of Broad-leaved and Fine-leaved Festuca Lineages (Poaceae) based on Nuclear ITS Sequences
inferredcites →https://doi.org/10.1073/pnas.1404177111openalex-snapshot
Allopolyploidy, diversification, and the Miocene grassland expansion
inferredcites →https://doi.org/10.1086/407511openalex-snapshot
Chromosomal Evolution in Higher Plants.G. Ledyard Stebbins
inferredcites →https://doi.org/10.1093/aob/mcw108openalex-snapshot
Breeding system diversification and evolution in AmericanPoasupersect.Homalopoa(Poaceae: Poeae: Poinae)
inferredcites →https://doi.org/10.1093/bioinformatics/btg412openalex-snapshot
APE: Analyses of Phylogenetics and Evolution in R language
inferredcites →https://doi.org/10.1093/bioinformatics/btp348openalex-snapshot
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
inferredcites →https://doi.org/10.1093/molbev/msj030openalex-snapshot
Application of Phylogenetic Networks in Evolutionary Studies
inferredcites →https://doi.org/10.1093/molbev/msu300openalex-snapshot
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
inferredcites →https://doi.org/10.1093/nar/gkf436openalex-snapshot
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
inferredcites →https://doi.org/10.1093/nar/gkw955openalex-snapshot
NOVOPlasty: de novo assembly of organelle genomes from whole genome data
inferredcites →https://doi.org/10.1093/sysbio/syu071openalex-snapshot
From Gene Trees to a Dated Allopolyploid Network: Insights from the Angiosperm Genus Viola (Violaceae)
inferredcites →https://doi.org/10.1093/sysbio/syw037openalex-snapshot
Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices
inferredcites →https://doi.org/10.1098/rstb.1990.0015openalex-snapshot
DNA methylation and epigenetic inheritance
inferredcites →https://doi.org/10.1101/gr.109744.110openalex-snapshot
Ancestral grass karyotype reconstruction unravels new mechanisms of genome shuffling as a source of plant evolution
inferredcites →https://doi.org/10.1105/tpc.107.056309openalex-snapshot
Identification and Characterization of Shared Duplications between Rice and Wheat Provide New Insight into Grass Genome Evolution
inferredcites →https://doi.org/10.1111/j.1601-5223.1949.tb03355.xopenalex-snapshot
THE EVOLUTIONARY SIGNIFICANCE OF NATURAL AND ARTIFICIAL POLYPLOIDS IN THE FAMILY GRAMINEAE
inferredcites →https://doi.org/10.1111/jbi.13012openalex-snapshot
Contrasting dispersal histories of broad‐ and fine‐leaved temperate Loliinae grasses: range expansion, founder events, and the roles of distance and barriers
inferredcites →https://doi.org/10.1111/tpj.15650openalex-snapshot
Tracking the ancestry of known and ‘ghost’ homeologous subgenomes in model grass Brachypodium polyploids
inferredcites →https://doi.org/10.1126/science.1207205openalex-snapshot
Recently Formed Polyploid Plants Diversify at Lower Rates
inferredcites →https://doi.org/10.1146/annurev.genet.34.1.401openalex-snapshot
POLYPLOID INCIDENCE AND EVOLUTION
inferredcites →https://doi.org/10.11646/phytotaxa.223.1.1openalex-snapshot
A revision of Festuca (Loliinae, Pooideae, Poaceae) in Chile
inferredcites →https://doi.org/10.1186/gb-2012-13-1-r3openalex-snapshot
A genome triplication associated with early diversification of the core eudicots
inferredcites →https://doi.org/10.1371/journal.pgen.1010226openalex-snapshot
Dioecy and chromosomal sex determination are maintained through allopolyploid speciation in the plant genus Mercurialis
inferredcites →https://doi.org/10.1371/journal.pone.0010989openalex-snapshot
Reticulate Evolutionary History of a Complex Group of Grasses: Phylogeny of Elymus StStHH Allotetraploids Based on Three Nuclear Genes
inferredcites →https://doi.org/10.2307/2399224openalex-snapshot
Polyploidy, Hybridization, and the Invasion of New Habitats
inferredcites →https://doi.org/10.2307/3391986openalex-snapshot
Two New Species of Festuca (Gramineae: Pooideae) from Mexico
inferredcites →https://doi.org/10.3389/fgene.2018.00639openalex-snapshot
Origin and Diversification of South American Polyploid Silene Sect. Physolychnis (Caryophyllaceae) in the Andes and Patagonia
inferredcites →https://doi.org/10.3389/fpls.2020.00041openalex-snapshot
The Utility of Graph Clustering of 5S Ribosomal DNA Homoeologs in Plant Allopolyploids, Homoploid Hybrids, and Cryptic Introgressants
inferredcites →https://doi.org/10.3389/fpls.2020.00819openalex-snapshot
Museomics Unveil the Phylogeny and Biogeography of the Neglected Juan Fernandez Archipelago Megalachne and Podophorus Endemic Grasses and Their Connection With Relict Pampean-Ventanian Fescues
inferredcites →https://doi.org/10.3389/fpls.2022.901733openalex-snapshot
Evolutionary Dynamics of the Repeatome Explains Contrasting Differences in Genome Sizes and Hybrid and Polyploid Origins of Grass Loliinae Lineages
inferredcites →https://doi.org/10.3732/ajb.0800079openalex-snapshot
Polyploidy and angiosperm diversification
inferredcites →https://doi.org/10.3732/ajb.1400178openalex-snapshot
The polyploidy revolution then…and now: Stebbins revisited
inferredcites →https://doi.org/10.3732/ajb.1500501openalex-snapshot
Polyploidy: Pitfalls and paths to a paradigm
inferredcites →https://doi.org/10.3732/ajb.91.7.1022openalex-snapshot
Molecular cytogenetic analysis of recently evolved Tragopogon (Asteraceae) allopolyploids reveal a karyotype that is additive of the diploid progenitors
inferredcites →https://doi.org/10.5642/aliso.20072301.31openalex-snapshot
A Systematic Approach to Subtribe Loliinae (Poaceae: Pooideae) Based on Phylogenetic Evidence

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3897/phytokeys.234.105385zenodo-depositor-declared
Preliminary checklist of the genus Festuca L. (Loliinae, Pooideae, Poaceae) in the Altai Mountains with outlines for further studies
inferred← citeshttps://doi.org/10.1002/tax.13278openalex-snapshot
Diversification of fescues (Festuca sect. Eskia, Poaceae), a key‐component of southern European mountainous grasslands
inferred← citeshttps://doi.org/10.1007/s00606-023-01867-xopenalex-snapshot
Genome size of grass Festuca mountain species from the southwestern European Pyrenees: variation, evolution, and new assessments
inferred← citeshttps://doi.org/10.1093/aob/mcag261openalex-snapshot
Shared pivotal genome of European and South American polyploid fescues ( Festuca sp.) uncovered by comparative cytogenetics
inferred← citeshttps://doi.org/10.1093/sysbio/syag035openalex-snapshot
Phylogenomic Discordances Reveal Conflicting Hybridization Episodes and Widespread Lineage-Sorting Events in Temperate Loliinae Grasses
inferred← citeshttps://doi.org/10.36253/jopt-18242openalex-snapshot
An ITS phylogeny of Festuca s.l. clarifies the generic circumscription of the broad-leaved complex (Poaceae, Pooideae, Poeae, Loliinae)
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