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Plastid Phylogenomic Analyses Reveal the Taxonomic Position of Peucedanum franchetii
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Genomics of Chloroplasts and Mitochondria
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An evolutionary perspective on synonymous codon usage in unicellular organisms
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Evolution of chloroplast mononucleotide microsatellites in Arabidopsis thaliana
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Conservation of RNA editing between rice and maize plastids: are most editing events dispensable?
inferredcites →https://doi.org/10.1007/s00606-003-0066-2openalex-snapshot
The phylogenetic position of Peucedanum sensu lato and allied genera and their placement in tribe Selineae (Apiaceae, subfamily Apioideae)
inferredcites →https://doi.org/10.1007/s13205-019-1893-3openalex-snapshot
Identification and analysis of RNA editing sites in chloroplast transcripts of kenaf (Hibiscus cannabinus L.)
inferredcites →https://doi.org/10.1016/1360-1385(96)86898-1openalex-snapshot
Polymorphism revealed by simple sequence repeats
inferredcites →https://doi.org/10.1016/b978-0-12-372180-8.50042-1openalex-snapshot
AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS
inferredcites →https://doi.org/10.1016/j.gene.2019.02.075openalex-snapshot
The complete chloroplast genome sequence of watercress (Nasturtium officinale R. Br.): Genome organization, adaptive evolution and phylogenetic relationships in Cardamineae
inferredcites →https://doi.org/10.1016/j.gene.2020.144340openalex-snapshot
The complete chloroplast genome sequence of yellow mustard (Sinapis alba L.) and its phylogenetic relationship to other Brassicaceae species
inferredcites →https://doi.org/10.1016/j.molcel.2015.07.018openalex-snapshot
Codon Usage Influences the Local Rate of Translation Elongation to Regulate Co-translational Protein Folding
inferredcites →https://doi.org/10.1016/j.molp.2020.06.009openalex-snapshot
TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data
inferredcites →https://doi.org/10.1016/j.ygeno.2019.04.010openalex-snapshot
Chloroplast genome of Hibiscus rosa-sinensis (Malvaceae): Comparative analyses and identification of mutational hotspots
inferredcites →https://doi.org/10.1016/j.ympev.2021.107183openalex-snapshot
Backbone phylogeny and evolution of Apioideae (Apiaceae): New insights from phylogenomic analyses of plastome data
inferredcites →https://doi.org/10.1016/s0169-5347(00)02097-8openalex-snapshot
Chloroplast microsatellites: new tools for studies in plant ecology and evolution
inferredcites →https://doi.org/10.1016/s1360-1385(96)80030-6openalex-snapshot
Plant organelle gene expression: Altered by RNA editing
inferredcites →https://doi.org/10.1017/cbo9781139002950.015openalex-snapshot
Contrasting patterns of support among plastid genes and genomes for major clades of the monocotyledons
inferredcites →https://doi.org/10.1038/nrg2899openalex-snapshot
Synonymous but not the same: the causes and consequences of codon bias
inferredcites →https://doi.org/10.1038/s41598-017-02083-7openalex-snapshot
Chloroplast Genomic Resource of Paris for Species Discrimination
inferredcites →https://doi.org/10.1038/s41598-017-12026-xopenalex-snapshot
Development of chloroplast genome resources for peanut (Arachis hypogaea L.) and other species of Arachis
inferredcites →https://doi.org/10.1038/s41598-018-20189-4openalex-snapshot
Chloroplast genomes of Byrsonima species (Malpighiaceae): comparative analysis and screening of high divergence sequences
inferredcites →https://doi.org/10.1038/s41598-018-30398-6openalex-snapshot
Complete chloroplast genome sequence of Fagopyrum dibotrys: genome features, comparative analysis and phylogenetic relationships
inferredcites →https://doi.org/10.1038/s41598-019-50620-3openalex-snapshot
The complete chloroplast genome of Stryphnodendron adstringens (Leguminosae - Caesalpinioideae): comparative analysis with related Mimosoid species
inferredcites →https://doi.org/10.1038/s41598-020-76699-7openalex-snapshot
Chloroplast genomes elucidate diversity, phylogeny, and taxonomy of Pulsatilla (Ranunculaceae)
inferredcites →https://doi.org/10.1073/pnas.1810022115openalex-snapshot
Codon usage influences fitness through RNA toxicity
inferredcites →https://doi.org/10.1073/pnas.75.4.1759openalex-snapshot
"Two out of three": an alternative method for codon reading.
inferredcites →https://doi.org/10.1080/10635150802429642openalex-snapshot
A Rapid Bootstrap Algorithm for the RAxML Web Servers
inferredcites →https://doi.org/10.1080/23802359.2019.1676180openalex-snapshot
The complete plastome of Peucedanum praeruptorum (Apiaceae)
inferredcites →https://doi.org/10.1086/706851openalex-snapshot
Molecular Phylogenetics of Ligusticum (Apiaceae) Based on nr DNA ITS Sequences: Rampant Polyphyly, Placement of the Chinese Endemic Species, and a Much-Reduced Circumscription of the Genus
inferredcites →https://doi.org/10.1093/aobpla/plac008openalex-snapshot
Phylogenetic position of Ligusticopsis (Apiaceae, Apioideae): evidence from molecular data and carpological characters
inferredcites →https://doi.org/10.1093/bioinformatics/14.9.817openalex-snapshot
MODELTEST: testing the model of DNA substitution.
inferredcites →https://doi.org/10.1093/bioinformatics/btl529openalex-snapshot
Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
inferredcites →https://doi.org/10.1093/bioinformatics/btp187openalex-snapshot
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
inferredcites →https://doi.org/10.1093/bioinformatics/bts199openalex-snapshot
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
inferredcites →https://doi.org/10.1093/bioinformatics/btx198openalex-snapshot
MISA-web: a web server for microsatellite prediction
inferredcites →https://doi.org/10.1093/bioinformatics/bty220openalex-snapshot
IRscope: an online program to visualize the junction sites of chloroplast genomes
inferredcites →https://doi.org/10.1093/bioinformatics/bty560openalex-snapshot
fastp: an ultra-fast all-in-one FASTQ preprocessor
inferredcites →https://doi.org/10.1093/dnares/11.4.247openalex-snapshot
Complete Chloroplast Genome Sequences from Korean Ginseng (Panax schinseng Nees) and Comparative Analysis of Sequence Evolution among 17 Vascular Plants
inferredcites →https://doi.org/10.1093/dnares/dsp025openalex-snapshot
The Chloroplast Genome Sequence of Mungbean (Vigna radiata) Determined by High-throughput Pyrosequencing: Structural Organization and Phylogenetic Relationships
inferredcites →https://doi.org/10.1093/molbev/mst010openalex-snapshot
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
inferredcites →https://doi.org/10.1093/nar/gkh458openalex-snapshot
VISTA: computational tools for comparative genomics
inferredcites →https://doi.org/10.1093/nar/gkp337openalex-snapshot
The PREP suite: predictive RNA editors for plant mitochondrial genes, chloroplast genes and user-defined alignments
inferredcites →https://doi.org/10.1093/nar/gkx391openalex-snapshot
GeSeq – versatile and accurate annotation of organelle genomes
inferredcites →https://doi.org/10.1093/nar/gkz238openalex-snapshot
OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040335openalex-snapshot
Codon usage and tRNA content in unicellular and multicellular organisms.
inferredcites →https://doi.org/10.1093/sysbio/sys029openalex-snapshot
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
inferredcites →https://doi.org/10.1101/gr.2289704openalex-snapshot
Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements
inferredcites →https://doi.org/10.1111/j.1744-7909.2011.01082.xopenalex-snapshot
RNA Editing Sites Exist in Protein-coding Genes in the Chloroplast Genome of Cycas taitungensis
inferredcites →https://doi.org/10.1111/jse.12254openalex-snapshot
Plant DNA barcodes: Applications today and in the future
inferredcites →https://doi.org/10.1127/1869-6155/2010/0128-0005openalex-snapshot
Major clades within Apiaceae subfamily Apioideae as inferred by phylogenetic analysis of nrDNA ITS sequences
inferredcites →https://doi.org/10.1134/s0006297911080086openalex-snapshot
RNA editing in plant organelles. Why make it easy?
inferredcites →https://doi.org/10.1155/2018/6293847openalex-snapshot
Development of Chloroplast Genomic Resources in Chinese Yam (Dioscorea polystachya)
inferredcites →https://doi.org/10.1186/1471-2148-14-151openalex-snapshot
Thirteen Camelliachloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships
inferredcites →https://doi.org/10.1186/1741-7007-7-84openalex-snapshot
Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes
inferredcites →https://doi.org/10.1186/s12864-018-4633-xopenalex-snapshot
Chloroplast genome analyses and genomic resource development for epilithic sister genera Oresitrophe and Mukdenia (Saxifragaceae), using genome skimming data
inferredcites →https://doi.org/10.1186/s12864-021-08193-xopenalex-snapshot
Complete chloroplast genome of Stephania tetrandra (Menispermaceae) from Zhejiang Province: insights into molecular structures, comparative genome analysis, mutational hotspots and phylogenetic relationships
inferredcites →https://doi.org/10.1186/s12870-014-0220-8openalex-snapshot
Comparative in silicoanalysis of EST-SSRs in angiosperm and gymnosperm tree genera
inferredcites →https://doi.org/10.1186/s12870-015-0587-1openalex-snapshot
Complete chloroplast genome sequence of MD-2 pineapple and its comparative analysis among nine other plants from the subclass Commelinidae
inferredcites →https://doi.org/10.1186/s12870-016-0944-8openalex-snapshot
Abundant RNA editing sites of chloroplast protein-coding genes in Ginkgo biloba and an evolutionary pattern analysis
inferredcites →https://doi.org/10.1186/s12870-017-1195-zopenalex-snapshot
Comparative analysis of inverted repeats of polypod fern (Polypodiales) plastomes reveals two hypervariable regions
inferredcites →https://doi.org/10.1186/s12870-020-02696-7openalex-snapshot
Plastomes of eight Ligusticum species: characterization, genome evolution, and phylogenetic relationships
inferredcites →https://doi.org/10.1186/s12870-022-03488-xopenalex-snapshot
The complete plastomes of seven Peucedanum plants: comparative and phylogenetic analyses for the Peucedanum genus
inferredcites →https://doi.org/10.1186/s13007-019-0435-7openalex-snapshot
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes
inferredcites →https://doi.org/10.1186/s13059-020-02154-5openalex-snapshot
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
inferredcites →https://doi.org/10.1186/s13104-016-1900-2openalex-snapshot
AdapterRemoval v2: rapid adapter trimming, identification, and read merging
inferredcites →https://doi.org/10.1371/journal.pone.0182281openalex-snapshot
Comparative analysis of complete plastid genomes from wild soybean (Glycine soja) and nine other Glycine species
inferredcites →https://doi.org/10.1371/journal.pone.0248556openalex-snapshot
Complete chloroplast genome features and phylogenetic analysis of Eruca sativa (Brassicaceae)
inferredcites →https://doi.org/10.1385/1-59259-192-2:71openalex-snapshot
DNASTAR's Lasergene Sequence Analysis Software
inferredcites →https://doi.org/10.14258/turczaninowia.20.2.9openalex-snapshot
Updated checklist of Chinese Umbelliferae: nomenclature, synonymy, typification, distribution
inferredcites →https://doi.org/10.21010/ajtcam.v13i6.12openalex-snapshot
MOLECULAR IDENTIFICATION OF ORIGINAL PLANTS OF FRITILLARIAE CIRRHOSAE BULBUS, ATRADTIONAL CHINESE MEDICINE (TCM) USING PLANT DNA BARCODING
inferredcites →https://doi.org/10.2307/25066009openalex-snapshot
A new generic classification for African peucedanoid species (Apiaceae)
inferredcites →https://doi.org/10.3390/genes8010013openalex-snapshot
Identification and Analysis of RNA Editing Sites in the Chloroplast Transcripts of Aegilops tauschii L.
inferredcites →https://doi.org/10.3390/ijms19041050openalex-snapshot
Comparative Plastid Genomes of Primula Species: Sequence Divergence and Phylogenetic Relationships
inferredcites →https://doi.org/10.3390/molecules23102426openalex-snapshot
Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Aster tataricus
inferredcites →https://doi.org/10.3390/plants9040543openalex-snapshot
Comparative Analysis of the Complete Plastid Genome of Five Bupleurum Species and New Insights into DNA Barcoding and Phylogenetic Relationship
inferredcites →https://doi.org/10.3390/plants9111523openalex-snapshot
Complete Plastid Genome Sequencing of Eight Species from Hansenia, Haplosphaera and Sinodielsia (Apiaceae): Comparative Analyses and Phylogenetic Implications
inferredcites →https://doi.org/10.3406/jobot.1997.1657openalex-snapshot
Contribution à la nomenclature générique des Apiaceae (Ombellifères)
inferredcites →https://doi.org/10.5169/seals-879615openalex-snapshot
Taxonomische Revision der Gattung Peucedanum : Sektion Peucedanum und Sektion Palimbioidea (Umbelliferae)
inferredcites →https://doi.org/10.7717/peerj.8063openalex-snapshot
Sequencing and analyses on chloroplast genomes of Tetrataenium candicans and two allies give new insights on structural variants, DNA barcoding and phylogeny in Apiaceae subfamily Apioideae
inferredcites →https://doi.org/10.7717/peerj.9552openalex-snapshot
Plastid genomics of Nicotiana (Solanaceae): insights into molecular evolution, positive selection and the origin of the maternal genome of Aztec tobacco ( Nicotiana rustica )
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.11646/phytotaxa.652.4.1zenodo-depositor-declared
Transferring Peucedanum macilentum (Apioideae, Apiaceae) to Ligusticopsis based on morphological and molecular evidences
inferred← citeshttps://doi.org/10.1007/s10482-025-02136-2openalex-snapshot
Green synthesis of silver nanoparticles from yam leaves: characterisation and in vitro efficacy against three phytopathogenic bacteria
inferred← citeshttps://doi.org/10.1016/j.sajb.2025.03.016openalex-snapshot
Complete chloroplast genomes of 6 rare and endangered species of Epimedium (Berberidaceae) from China: Genomic features, comparative analysis, and phylogenetic relationship
inferred← citeshttps://doi.org/10.1111/njb.04527openalex-snapshot
Ligusticopsis muliensis, a new combination separated from Peucedanum sensu lato (Apiaceae)
inferred← citeshttps://doi.org/10.1186/s12870-024-04750-0openalex-snapshot
Phylogeny and diversification of genus Sanicula L. (Apiaceae): novel insights from plastid phylogenomic analyses
inferred← citeshttps://doi.org/10.1186/s12870-026-09263-6openalex-snapshot
Integrating plastome comparison and phylogenetic analyses reveals the phylogenetic relationships of Pachypleurum (Apiaceae)
inferred← citeshttps://doi.org/10.3389/fpls.2024.1351023openalex-snapshot
Plastid phylogenomics contributes to the taxonomic revision of taxa within the genus Sanicula L. and acceptance of two new members of the genus
inferred← citeshttps://doi.org/10.3389/fpls.2024.1425158openalex-snapshot
Phylogeny, adaptive evolution, and taxonomy of Acronema (Apiaceae): evidence from plastid phylogenomics and morphological data
inferred← citeshttps://doi.org/10.3389/fpls.2024.1504734openalex-snapshot
Morphology, phylogeography, phylogeny, and taxonomy of Cyclorhiza (Apiaceae)
inferred← citeshttps://doi.org/10.3389/fpls.2024.1518418openalex-snapshot
Genome skimming provides evidence to accept two new genera (Apiaceae) separated from the Peucedanum s.l.
inferred← citeshttps://doi.org/10.3389/fpls.2026.1934280openalex-snapshot
Phylogeny and comparative chloroplast genomics reveal a rare new short-styled homostylous species of Primula (Primulaceae) from southwestern China
inferred← citeshttps://doi.org/10.3390/genes16070823openalex-snapshot
Phylogenetic Analyses and Plastome Comparison to Confirm the Taxonomic Position of Ligusticum multivittatum (Apiaceae, Apioideae)
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