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Phylogeny of Tricalysia (Rubiaceae) and its Relationships with Allied Genera Based on Plastid DNA Data: Resurrection of the Genus Empogona1

https://doi.org/10.3417/2006202
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Low Levels of Intraspecific Genetic Variation at a Rapidly Evolving Chloroplast DNA Locus in North American Duckweeds (Lemnaceae)
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Site-directed mutagenesis and expression inEscherichia coli of WMAI-1, a wheat monomeric inhibitor of insect ?-amylase
inferredcites →https://doi.org/10.1007/bf00037152openalex-snapshot
Universal primers for amplification of three non-coding regions of chloroplast DNA
inferredcites →https://doi.org/10.1016/0031-9422(80)85004-7openalex-snapshot
Deviations from michaelis-menten behaviour of plant glutamate dehydrogenase with ammonium as variable substrate
inferredcites →https://doi.org/10.1057/9780230618404_8openalex-snapshot
The Democratic Republic of the Congo
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Potential Applications and Pitfalls of Bayesian Inference of Phylogeny
inferredcites →https://doi.org/10.1080/10635150390235485openalex-snapshot
Reliability of Bayesian Posterior Probabilities and Bootstrap Frequencies in Phylogenetics
inferredcites →https://doi.org/10.1080/10635159950173889openalex-snapshot
Gaps as Characters in Sequence-Based Phylogenetic Analyses
inferredcites →https://doi.org/10.1086/284325openalex-snapshot
Phylogenies and the Comparative Method
inferredcites →https://doi.org/10.1093/bioinformatics/14.9.817openalex-snapshot
MODELTEST: testing the model of DNA substitution.
inferredcites →https://doi.org/10.1093/bioinformatics/17.8.754openalex-snapshot
MRBAYES: Bayesian inference of phylogenetic trees
inferredcites →https://doi.org/10.1093/molbev/msi019openalex-snapshot
Molecular Evolution and Phylogenetic Utility of the petD Group II Intron: A Case Study in Basal Angiosperms
inferredcites →https://doi.org/10.1093/sysbio/49.2.369openalex-snapshot
Gaps as Characters in Sequence-Based Phylogenetic Analyses
inferredcites →https://doi.org/10.1111/j.1095-8339.2007.00688.xopenalex-snapshot
Revision of the Malagasy species of the genus Tricalysia (Rubiaceae)
inferredcites →https://doi.org/10.1111/j.1756-1051.2000.tb00742.xopenalex-snapshot
Phylogeny of Gardenieae (Rubiaceae) based on chloroplast DNA sequences from the rps 16 intron and trnL(UAA)‐F(GAA) intergenic spacer
inferredcites →https://doi.org/10.2307/1222644openalex-snapshot
Tropical Woody Rubiaceae
inferredcites →https://doi.org/10.2307/25065298openalex-snapshot
Bayesian Inference of Phylogenetics Revisited: Developments and Concerns
inferredcites →https://doi.org/10.2307/2656750openalex-snapshot
Combined phylogenetic analysis in the Rubiaceae‐Ixoroideae: morphology, nuclear and chloroplast DNA data
inferredcites →https://doi.org/10.2307/3667793openalex-snapshot
The African Genus Tricalysia A. Rich. (Rubiaceae). 3. Probletostemon Revived as a Section of Subgenus Tricalysia
inferredcites →https://doi.org/10.2307/3667886openalex-snapshot
The African Genus Tricalysia A. Rich. (Rubiaceae-Coffeeae). 2. Ephedranthera, a New Section of Subgenus Tricalysia
inferredcites →https://doi.org/10.2307/3667918openalex-snapshot
Sericanthe, a New African Genus of Rubiaceae (Coffeeae)
inferredcites →https://doi.org/10.2307/3668089openalex-snapshot
The African Genus Tricalysia A. Rich. (Rubiaceae-Coffeeae). 1. A Revision of the Species of Subgenus Empogona
inferredcites →https://doi.org/10.2307/3668317openalex-snapshot
The African Genus Tricalysia A. Rich. (Rubiaceae). 4. A Revision of the Species of Sectio Tricalysia and Sectio Rosea
inferredcites →https://doi.org/10.2307/4109502openalex-snapshot
Empogona Hook. F. and Its Relation to Tricalysia DC
inferredcites →https://doi.org/10.2307/4117761openalex-snapshot
A Synoptic Revision of Belonophora (Rubiaceae)
inferredcites →https://doi.org/10.3732/ajb.92.1.142openalex-snapshot
The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis
inferredcites →https://doi.org/10.3732/ajb.94.3.313openalex-snapshot
Searching for the relatives of Coffea (Rubiaceae, Ixoroideae): the circumscription and phylogeny of Coffeeae based on plastid sequence data and morphology
inferredcites →https://doi.org/10.5860/choice.39-2183openalex-snapshot
MacClade 4.0: analysis of phylogeny and character evolution

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/phytotaxa.430.2.3zenodo-depositor-declared
A new species of Sericanthe (Coffeeae, Rubiaceae) from Chimanimani Mountains, Mozambique-Zimbabwe border
inferred← citeshttps://doi.org/10.5091/plecevo.2020.1661zenodo-depositor-declared
Notes on Tricalysia elmar sp. nov. (Rubiaceae, Coffeeae), and cloud forest of the Cameroon Highlands
inferred← citeshttps://doi.org/10.5091/plecevo.2020.1670zenodo-depositor-declared
Three new species of Tricalysia (Rubiaceae) from Atlantic Central Africa
inferred← citeshttps://doi.org/10.5852/ejt.2024.935.2539zenodo-depositor-declared
Calycosiphonia or Kupeantha (Coffeeae, Rubiaceae)? A morphological and molecular study of a new species from the Albertine Rift
inferred← citeshttps://doi.org/10.1002/jsfa.7692openalex-snapshot
Advances in genomics for the improvement of quality in coffee
inferred← citeshttps://doi.org/10.1002/tax.13167openalex-snapshot
Phylogeny and classification of the coffee family (Rubiaceae, Gentianales): Overview and outlook
inferred← citeshttps://doi.org/10.1002/tax.596013openalex-snapshot
A new herbaceous genus endemic to Madagascar: Phialiphora (Spermacoceae, Rubiaceae)
inferred← citeshttps://doi.org/10.1002/tax.604001openalex-snapshot
Molecular support for a basal grade of morphologically distinct, monotypic genera in the species‐rich Vanguerieae alliance (Rubiaceae, Ixoroideae): Its systematic and conservation implications
inferred← citeshttps://doi.org/10.1007/s00606-016-1307-5openalex-snapshot
Kanapia (Vanguerieae): a new endemic genus of Philippine Rubiaceae
inferred← citeshttps://doi.org/10.1007/s00606-020-01630-6openalex-snapshot
It is not a disaster: molecular and morphologically based phylogenetic analysis of Rondeletieae and the Rondeletia complex (Cinchonoideae, Rubiaceae)
inferred← citeshttps://doi.org/10.1007/s12225-024-10237-wopenalex-snapshot
Notes on the endemic and near endemic threatened rainforest plant species of Banyang Mbo Wildlife Sanctuary, SW Region, Cameroon, and Tricalysia banyangmbo sp. nov. (Rubiaceae-Coffeeae), a new coffee relative
inferred← citeshttps://doi.org/10.1007/s12275-011-1163-5openalex-snapshot
Identification, origin, and evolution of leaf nodulating symbionts of Sericanthe (Rubiaceae)
inferred← citeshttps://doi.org/10.1016/j.jnc.2021.126027openalex-snapshot
An efficient method for defining plant species under High Conservation Value (HCV) criterion 1 based on the IUCN Red List criteria: A case study using species endemic to Gabon
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.10.024openalex-snapshot
Dispersing towards Madagascar: Biogeography and evolution of the Madagascan endemics of the Spermacoceae tribe (Rubiaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2017.02.009openalex-snapshot
Genotyping-by-sequencing provides the first well-resolved phylogeny for coffee (Coffea) and insights into the evolution of caffeine content in its species
inferred← citeshttps://doi.org/10.1016/j.ympev.2019.106685openalex-snapshot
Phylogenetic affinity of an enigmatic Rubiaceae from the Seychelles revealing a recent biogeographic link with Central Africa: gen. nov. Seychellea and trib. nov. Seychelleeae
inferred← citeshttps://doi.org/10.1093/aob/mct222openalex-snapshot
Evolutionary history of the Afro-Madagascan Ixora species (Rubiaceae): species diversification and distribution of key morphological traits inferred from dated molecular phylogenetic trees
inferred← citeshttps://doi.org/10.1093/botlinnean/boag003openalex-snapshot
Late Miocene Cooling drives range evolution in the African-Malagasy endemic Tricalysia (Rubiaceae: Coffeeae)
inferred← citeshttps://doi.org/10.1093/botlinnean/boag013openalex-snapshot
Notes on Sericanthe (Rubiaceae) from Central Africa, including a new combination and a new species from Cameroon: Sericanthe owonoana sp. nov.
inferred← citeshttps://doi.org/10.1093/botlinnean/boy059openalex-snapshot
Using multiple plastid DNA regions to construct the first phylogenetic tree for Asian genera of Coffeeae (Ixoroideae, Rubiaceae)
inferred← citeshttps://doi.org/10.1101/2025.02.24.639651openalex-snapshot
Sericanthe etugei and S. onanae (Coffeeae Rubiaceae) new cloud forest tree species Endangered in Southwest Cameroon & Bioko (Equatorial Guinea)
inferred← citeshttps://doi.org/10.1111/boj.12038openalex-snapshot
Phylogenetic relationships and new tribal delimitations in subfamily Ixoroideae (Rubiaceae)
inferred← citeshttps://doi.org/10.1111/boj.12062openalex-snapshot
Taxonomy and phylogenetics ofCuviera(Rubiaceae-Vanguerieae) and reinstatement ofGlobulostyliswith the description of three new species
inferred← citeshttps://doi.org/10.1111/j.1095-8339.2010.01060.xopenalex-snapshot
Amphistemon and Thamnoldenlandia, two new genera of Rubiaceae (Spermacoceae) endemic to Madagascar
inferred← citeshttps://doi.org/10.1111/j.1095-8339.2011.01177.xopenalex-snapshot
Growing coffee: Psilanthus (Rubiaceae) subsumed on the basis of molecular and morphological data; implications for the size, morphology, distribution and evolutionary history of Coffea
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A reconsideration of the Lower Guinean species of Sericanthe (Rubiaceae, Coffeeae), with four new species from Cameroon and Gabon
inferred← citeshttps://doi.org/10.1111/j.1756-1051.2011.01113.xopenalex-snapshot
Psilanthus mannii , the type species of Psilanthus , transferred to Coffea
inferred← citeshttps://doi.org/10.1111/jbi.12981openalex-snapshot
Island hopping, long‐distance dispersal and species radiation in the Western Indian Ocean: historical biogeography of the Coffeeae alliance (Rubiaceae)
inferred← citeshttps://doi.org/10.1111/njb.03732openalex-snapshot
New chromosome counts on Rubiaceae from Africa and the Western Indian Ocean islands
inferred← citeshttps://doi.org/10.1126/sciadv.aav3473openalex-snapshot
High extinction risk for wild coffee species and implications for coffee sector sustainability
inferred← citeshttps://doi.org/10.11609/jott.8698.15.12.24420-24426openalex-snapshot
Notes on Discospermum sphaerocarpum Dalzell ex Hook.f., a rare species of Rubiaceae (Ixoroideae: Coffeeae) from southern India
inferred← citeshttps://doi.org/10.1186/s12870-022-03480-5openalex-snapshot
Phylogenomic and comparative analyses of Coffeeae alliance (Rubiaceae): deep insights into phylogenetic relationships and plastome evolution
inferred← citeshttps://doi.org/10.12705/634.4openalex-snapshot
Phylogenetic structure and clade circumscriptions in the Gardenieae complex (Rubiaceae)
inferred← citeshttps://doi.org/10.1371/journal.pone.0021019openalex-snapshot
Expression and Trans-Specific Polymorphism of Self-Incompatibility RNases in Coffea (Rubiaceae)
inferred← citeshttps://doi.org/10.1371/journal.pone.0199324openalex-snapshot
Kupeantha (Coffeeae, Rubiaceae), a new genus from Cameroon and Equatorial Guinea
inferred← citeshttps://doi.org/10.1371/journal.pone.0232295openalex-snapshot
Chloroplast genomes of Rubiaceae: Comparative genomics and molecular phylogeny in subfamily Ixoroideae
inferred← citeshttps://doi.org/10.1600/036364412x656482openalex-snapshot
Sequence Data from New Plastid and Nuclear COSII Regions Resolves Early Diverging Lineages in Coffea (Rubiaceae)
inferred← citeshttps://doi.org/10.3389/fpls.2019.01188openalex-snapshot
Elucidation of Hosts, Native Distribution, and Habitat of the Coffee Berry Borer (Hypothenemus hampei) Using Herbaria and Other Museum Collections
inferred← citeshttps://doi.org/10.3390/ijms242015138openalex-snapshot
Comparative Analyses of Chloroplast Genome Provide Effective Molecular Markers for Species and Cultivar Identification in Bougainvillea
inferred← citeshttps://doi.org/10.3897/phytokeys.99.23713openalex-snapshot
Four new endemic genera of Rubiaceae (Pavetteae) from Madagascar represent multiple radiations into drylands
inferred← citeshttps://doi.org/10.4102/abc.v47i1.2145openalex-snapshot
Bertiera sinoensis Jongkind (Rubiaceae), a new forest liana from Liberia
inferred← citeshttps://doi.org/10.5735/085.055.0119openalex-snapshot
Discospermum reyesii(Coffeeae, Rubiaceae), a New Species from Cebu, Visayas, Philippines
inferred← citeshttps://doi.org/10.7287/peerj.15778v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Metagenomics of African Empogona and Tricalysia (Rubiaceae) reveals the presence of leaf endophytes (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.15778v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Metagenomics of African Empogona and Tricalysia (Rubiaceae) reveals the presence of leaf endophytes (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.15778v0.2/reviews/2openalex-snapshot
Peer Review #2 of "Metagenomics of African Empogona and Tricalysia (Rubiaceae) reveals the presence of leaf endophytes (v0.2)"
inferred← citeshttps://doi.org/10.7717/peerj.15778openalex-snapshot
Metagenomics of African Empogona and Tricalysia (Rubiaceae) reveals the presence of leaf endophytes
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