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Molecular phylogenetics of Prescottiinae s.l. and their close allies (Orchidaceae, Cranichideae) inferred from plastid and nuclear ribosomal DNA sequences

https://doi.org/10.3732/ajb.0800219
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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GENERIC REDEFINITION IN SUBTRIBE SPIRANTHINAE (ORCHIDACEAE)
inferredcites →https://doi.org/10.1007/bf00037152openalex-snapshot
Universal primers for amplification of three non-coding regions of chloroplast DNA
inferredcites →https://doi.org/10.1007/bf02338839openalex-snapshot
Probability Distribution of Molecular Evolutionary Trees: A New Method of Phylogenetic Inference
inferredcites →https://doi.org/10.1007/s004420050430openalex-snapshot
Effects of temperature on photosynthesis of two morphologically contrasting plant species along an altitudinal gradient in the tropical high Andes
inferredcites →https://doi.org/10.1007/s10592-005-9073-xopenalex-snapshot
Development and characterization of polymorphic microsatellite loci in endangered fern Adiantum reniforme var. sinense
inferredcites →https://doi.org/10.1016/0031-9422(80)85004-7openalex-snapshot
Deviations from michaelis-menten behaviour of plant glutamate dehydrogenase with ammonium as variable substrate
inferredcites →https://doi.org/10.1016/0378-1119(88)90330-7openalex-snapshot
CLUSTAL: a package for performing multiple sequence alignment on a microcomputer
inferredcites →https://doi.org/10.1016/b978-0-12-372180-8.50042-1openalex-snapshot
AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS
inferredcites →https://doi.org/10.1016/j.ympev.2003.10.010openalex-snapshot
Utility of plastid psaB gene sequences for investigating intrafamilial relationships within Orchidaceae
inferredcites →https://doi.org/10.1017/cbo9780511551475.003openalex-snapshot
Tropical alpine climates
inferredcites →https://doi.org/10.1017/cbo9780511551475.011openalex-snapshot
Functional significance of inflorescence pubescence in tropical alpine species of Puya
inferredcites →https://doi.org/10.1043/0363-6445-26.3.643openalex-snapshot
Analysis of Mitochondrial nad1b-c Intron Sequences in Orchidaceae: Utility and Coding of Length-change Characters
inferredcites →https://doi.org/10.1071/sb97010openalex-snapshot
Gene sequences, collaboration and analysis of large data sets
inferredcites →https://doi.org/10.1080/106351500750049743openalex-snapshot
Integrating Ambiguously Aligned Regions of DNA Sequences in Phylogenetic Analyses Without Violating Positional Homology
inferredcites →https://doi.org/10.1080/10635150390218213openalex-snapshot
Comparing Bootstrap and Posterior Probability Values in the Four-Taxon Case
inferredcites →https://doi.org/10.1080/106351598261012openalex-snapshot
Inferring Complex Phylogenies Using Parsimony: An Empirical Approach Using Three Large DNA Data Sets for Angiosperms
inferredcites →https://doi.org/10.1093/aob/mcm328openalex-snapshot
Root Character Evolution and Systematics in Cranichidinae, Prescottiinae and Spiranthinae (Orchidaceae, Cranichideae)
inferredcites →https://doi.org/10.1093/bioinformatics/14.9.817openalex-snapshot
MODELTEST: testing the model of DNA substitution.
inferredcites →https://doi.org/10.1093/bioinformatics/17.8.754openalex-snapshot
MRBAYES: Bayesian inference of phylogenetic trees
inferredcites →https://doi.org/10.1093/bioinformatics/5.2.151openalex-snapshot
Fast and sensitive multiple sequence alignments on a microcomputer
inferredcites →https://doi.org/10.1093/bioinformatics/btg180openalex-snapshot
MrBayes 3: Bayesian phylogenetic inference under mixed models
inferredcites →https://doi.org/10.1093/nar/25.24.4876openalex-snapshot
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025813openalex-snapshot
Can three incongruence tests predict when data should be combined?
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026160openalex-snapshot
Markov Chasin Monte Carlo Algorithms for the Bayesian Analysis of Phylogenetic Trees
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026192openalex-snapshot
Molecular phylogenetic analysis among bryophytes and tracheophytes based on combined data of plastid coded genes and the 18S rRNA gene
inferredcites →https://doi.org/10.1093/sysbio/40.3.315openalex-snapshot
The Discovery and Importance of Multiple Islands of Most-Parsimonious Trees
inferredcites →https://doi.org/10.1093/sysbio/45.4.524openalex-snapshot
Testing for Phylogenetic Conflict Among Molecular Data Sets in the Tribe Triticeae (Gramineae)
inferredcites →https://doi.org/10.1093/sysbio/49.2.369openalex-snapshot
Gaps as Characters in Sequence-Based Phylogenetic Analyses
inferredcites →https://doi.org/10.1111/j.1095-8312.2004.00368.xopenalex-snapshot
Molecular and morphological data reveal cryptic taxonomic diversity in the terrestrial slug complex Arion subfuscus/fuscus (Mollusca, Pulmonata, Arionidae) in continental north-west Europe
inferredcites →https://doi.org/10.1111/j.1095-8339.1881.tb01258.xopenalex-snapshot
Notes on Orchideae.
inferredcites →https://doi.org/10.1111/j.1096-0031.1994.tb00181.xopenalex-snapshot
TESTING SIGNIFICANCE OF INCONGRUENCE
inferredcites →https://doi.org/10.1111/j.1096-0031.1996.tb00196.xopenalex-snapshot
PARSIMONY JACKKNIFING OUTPERFORMS NEIGHBOR‐JOINING
inferredcites →https://doi.org/10.1111/j.1558-5646.1988.tb02497.xopenalex-snapshot
THE LIMITS OF AMINO ACID SEQUENCE DATA IN ANGIOSPERM PHYLOGENETIC RECONSTRUCTION
inferredcites →https://doi.org/10.1126/science.1523408openalex-snapshot
Carnivorous Plants: Phylogeny and Structural Evolution
inferredcites →https://doi.org/10.1146/annurev.pp.38.060187.002135openalex-snapshot
Evolution of Higher-Plant Chloroplast DNA-Encoded Genes: Implications for Structure-Function and Phylogenetic Studies
inferredcites →https://doi.org/10.1186/1471-2105-4-6openalex-snapshot
GapCoder automates the use of indel characters in phylogenetic analysis
inferredcites →https://doi.org/10.1890/0012-9658(2000)081[1425:aheitm]2.0.co;2openalex-snapshot
ARE HIGH ELEVATIONS IN TROPICAL MOUNTAINS ARID ENVIRONMENTS FOR PLANTS?
inferredcites →https://doi.org/10.2307/1219717openalex-snapshot
The Orchids: Natural History and Classification
inferredcites →https://doi.org/10.2307/2394615openalex-snapshot
Classification and Phylogeny in the Orchidacea
inferredcites →https://doi.org/10.2307/2399877openalex-snapshot
The Utility of atpB Gene Sequences in Resolving Phylogenetic Relationships: Comparison with rbcL and 18S Ribosomal DNA Sequences in the Lardizabalaceae
inferredcites →https://doi.org/10.2307/2656837openalex-snapshot
Subtribal and generic relationships of Maxillarieae (Orchidaceae) with emphasis on Stanhopeinae: combined molecular evidence
inferredcites →https://doi.org/10.2307/2656895openalex-snapshot
Phylogeny and biogeography of Juglans (Juglandaceae) based on matK and ITS sequence data
inferredcites →https://doi.org/10.2307/2656938openalex-snapshot
A phylogenetic analysis of the Orchidaceae: evidence from rbcL nucleotide sequences
inferredcites →https://doi.org/10.2307/2656939openalex-snapshot
What does morphology tell us about orchid relationships?—a cladistic analysis
inferredcites →https://doi.org/10.2307/2992325openalex-snapshot
The Discovery and Importance of Multiple Islands of Most-Parsimonious Trees
inferredcites →https://doi.org/10.2307/3558366openalex-snapshot
A phylogenetic analysis of Diurideae (Orchidaceae) based on plastid DNA sequence data
inferredcites →https://doi.org/10.2307/3558390openalex-snapshot
Phylogenetic relationships in Pleurothallidinae (Orchidaceae): combined evidence from nuclear and plastid DNA sequences
inferredcites →https://doi.org/10.2307/3994326openalex-snapshot
Das System der Orchidaceen
inferredcites →https://doi.org/10.2307/4118763openalex-snapshot
An Orchid Flora of Puerto Rico and the Virgin Islands
inferredcites →https://doi.org/10.3732/ajb.90.5.777openalex-snapshot
Phylogenetics of Cranichideae with emphasis on Spiranthinae (Orchidaceae, Orchidoideae): evidence from plastid and nuclear DNA sequences
inferredcites →https://doi.org/10.3732/ajb.91.1.149openalex-snapshot
An expanded plastid DNA phylogeny of Orchidaceae and analysis of jackknife branch support strategy
inferredcites →https://doi.org/10.3732/ajb.93.5.770openalex-snapshot
Molecular phylogenetics of Vandeae (Orchidaceae) and the evolution of leaflessness
inferredcites →https://doi.org/10.5479/si.0081024x.61openalex-snapshot
A phylogenetic analysis of the Orchidaceae
inferredcites →https://doi.org/10.5642/aliso.20062201.36openalex-snapshot
A Comparison and Combination of Plastid atpB and rbcL Gene Sequences for Inferring Phylogenetic Relationships within Orchidaceae
inferredcites →https://doi.org/10.5860/choice.31-2679openalex-snapshot
Phylogeny and classification of the orchid family
inferredcites →https://doi.org/10.5860/choice.33-3895openalex-snapshot
An orchid flora of Puerto Rico and the Virgin Islands
inferredcites →https://doi.org/10.5962/bhl.title.120492openalex-snapshot
The genera and species of orchidaceous plants
inferredcites →https://doi.org/10.5962/p.168651openalex-snapshot
A Generic Revision of the Spiranthinae
inferredcites →https://doi.org/10.5962/p.295135openalex-snapshot
Orchid Studies, X: Orchids from America and Asia

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/phytotaxa.173.2.3zenodo-depositor-declared
Phylogenetic relationships of Discyphus scopulariae (Orchidaceae, Cranichideae) inferred from plastid and nuclear DNA sequences: evidence supporting recognition of a new subtribe, Discyphinae
inferred← citeshttps://doi.org/10.11646/phytotaxa.178.4.1zenodo-depositor-declared
A revision of Prescottia (Orchidaceae: Orchidoideae, Cranichideae)
inferred← citeshttps://doi.org/10.11646/phytotaxa.186.1.4zenodo-depositor-declared
Goodyera malipoensis (Cranichideae, Orchidaceae), a new species from China: Evidence from morphological and molecular analyses
inferred← citeshttps://doi.org/10.11646/phytotaxa.311.3.3zenodo-depositor-declared
A NEW SPECIES AND FIRST RECORD OF THE GENUS PTEROGLOSSA (ORCHIDACEAE: SPIRANTHINAE) FROM PERU
inferred← citeshttps://doi.org/10.1007/s00606-012-0690-9openalex-snapshot
Three new species of Myrosmodes (Orchidaceae, Spiranthoideae) from Colombia and Ecuador
inferred← citeshttps://doi.org/10.1007/s00606-013-0777-yopenalex-snapshot
New species of the genus Cranichis (Orchidaceae, Cranichidinae) from Colombia
inferred← citeshttps://doi.org/10.1007/s00606-014-1010-3openalex-snapshot
Two new species of Aa (Orchidaceae, Spiranthoideae) from Colombia
inferred← citeshttps://doi.org/10.1007/s00606-014-1054-4openalex-snapshot
Eight new species of Gomphichis (Orchidaceae, Spiranthoideae) from Colombia
inferred← citeshttps://doi.org/10.1007/s00606-014-1110-0openalex-snapshot
Overview of Cranichis (Orchidaceae, Cranichidinae) and allied genera with notes on their Colombian representatives
inferred← citeshttps://doi.org/10.1007/s40415-015-0133-2openalex-snapshot
Root and leaf anatomy of some terrestrial representatives of the Cranichideae tribe (Orchidaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2011.11.026openalex-snapshot
Molecular phylogeny of Gavilea (Chloraeinae: Orchidaceae) using plastid and nuclear markers
inferred← citeshttps://doi.org/10.1016/j.ympev.2019.106542openalex-snapshot
Molecular systematics of Goodyerinae (Cranichideae, Orchidoideae, Orchidaceae) based on multiple nuclear and plastid regions
inferred← citeshttps://doi.org/10.1071/bt10190openalex-snapshot
Phylogenetic relationships in Pterostylidinae (Cranichideae: Orchidaceae): combined evidence from nuclear ribomsomal and plastid DNA sequences
inferred← citeshttps://doi.org/10.1071/bt17111openalex-snapshot
Species-specific male pollinators found for three native New Zealand greenhood orchids (Pterostylis spp.) suggest pollination by sexual deception
inferred← citeshttps://doi.org/10.1093/botlinnean/boab028openalex-snapshot
An Indomalesian origin in the Miocene for the diphyletic New World jewel orchids (Goodyerinae, Orchidoideae): molecular dating and biogeographic analyses document non-monophyly of the Neotropical genera
inferred← citeshttps://doi.org/10.1093/botlinnean/bow001openalex-snapshot
How many genera of vascular plants are endemic to New Caledonia? A critical review based on phylogenetic evidence
inferred← citeshttps://doi.org/10.1093/botlinnean/box088openalex-snapshot
Phylogenetics and systematics of Eria and related genera (Orchidaceae: Podochileae)
inferred← citeshttps://doi.org/10.1093/botlinnean/box096openalex-snapshot
Phylogenetic systematics of subtribe Spiranthinae (Orchidaceae: Orchidoideae: Cranichideae) based on nuclear and plastid DNA sequences of a nearly complete generic sample
inferred← citeshttps://doi.org/10.1111/1442-1984.12453openalex-snapshot
Reproductive biology in Gomphichis valida Rchb. f. (Orchidaceae: Orchidoideae, Cranichidinae): Generalist pollination in a high‐Andean terrestrial orchid with long‐lived flowers
inferred← citeshttps://doi.org/10.1111/boj.12136openalex-snapshot
Phylogenetic position and floral morphology of the Brazilian endemic, monospecific genusCotylolabium: a sister group for the remaining Spiranthinae (Orchidaceae)
inferred← citeshttps://doi.org/10.1111/boj.12234openalex-snapshot
An updated classification of Orchidaceae
inferred← citeshttps://doi.org/10.1111/brv.12485openalex-snapshot
Recent advances in New Caledonian biogeography
inferred← citeshttps://doi.org/10.1111/cla.12538openalex-snapshot
Systematics and biogeography of the Old World fern genus Antrophyum
inferred← citeshttps://doi.org/10.1111/j.1095-8339.2011.01113.xopenalex-snapshot
Phylogenetic placement, taxonomic revision and a new species of Nothostele (Orchidaceae), an enigmatic genus endemic to the cerrado of central Brazil
inferred← citeshttps://doi.org/10.1111/j.1095-8339.2011.01161.xopenalex-snapshot
Molecular phylogenetics, floral convergence and systematics of Dichromanthus and Stenorrhynchos (Orchidaceae: Spiranthinae)
inferred← citeshttps://doi.org/10.1111/j.1095-8339.2011.01200.xopenalex-snapshot
Phylogenetic analysis of Chloraeinae (Orchidaceae) based on plastid and nuclear DNA sequences
inferred← citeshttps://doi.org/10.1111/j.1756-1051.2013.00172.xopenalex-snapshot
Cranichis badia, C. brevirostris and C. silvicola spp. nov. (Orchidaceae, Cranichidinae) from Colombia and Venezuela
inferred← citeshttps://doi.org/10.1111/jse.12187openalex-snapshot
A molecular phylogeny of Chinese orchids
inferred← citeshttps://doi.org/10.1111/njb.01569openalex-snapshot
The genus Myrosmodes (Orchidaceae: Cranichidinae) in Argentina
inferred← citeshttps://doi.org/10.1371/journal.pone.0150366openalex-snapshot
Phylogenetic Analysis of a ‘Jewel Orchid’ Genus Goodyera (Orchidaceae) Based on DNA Sequence Data from Nuclear and Plastid Regions
inferred← citeshttps://doi.org/10.1371/journal.pone.0227991openalex-snapshot
Characterization of sequence variability hotspots in Cranichideae plastomes (Orchidaceae, Orchidoideae)
inferred← citeshttps://doi.org/10.15517/lank.v11i1.18309openalex-snapshot
New species of Aa and new combinations in Myrosmodes (Orchidaceae: Cranichidinae) from Bolivia and Peru
inferred← citeshttps://doi.org/10.15517/lank.v11i1.18313openalex-snapshot
Aa from lomas formations. A new Orchidaceae record from the desert coast of Peru
inferred← citeshttps://doi.org/10.15517/lank.v16i2.25880openalex-snapshot
The Andean genus Myrosmodes (Orchidaceae, Cranichideae) in Peru
inferred← citeshttps://doi.org/10.1600/036364411x569462openalex-snapshot
A New Species of Galeoglossum (Orchidaceae, Cranichidinae) from Oaxaca, Mexico
inferred← citeshttps://doi.org/10.1600/036364412x616657openalex-snapshot
Quechua, a New Monotypic Genus of Andean Spiranthinae (Orchidaceae)
inferred← citeshttps://doi.org/10.1600/036364414x681491openalex-snapshot
Revision of the Genus Myrosmodes (Orchidaceae, Spiranthoideae) in Colombia
inferred← citeshttps://doi.org/10.1600/036364415x688312openalex-snapshot
A New Species of Pseudocentrum (Orchidaceae, Cranichideae) With Notes on P. lehmannii
inferred← citeshttps://doi.org/10.1600/036364416x693937openalex-snapshot
Greenwoodiella, a New Genus of Spiranthinae (Orchidaceae) from North and Central America and the Greater Antilles, with a New Species from the Chihuahuan Desert
inferred← citeshttps://doi.org/10.1600/036364419x15562054132974openalex-snapshot
Polyphyly of Mesadenus (Orchidaceae, Spiranthinae) and a New Genus from the Espinhaço Range, Southeastern Brazil
inferred← citeshttps://doi.org/10.1600/036364420x16033962925178openalex-snapshot
Aa (Orchidaceae) of Southern Central Andes: Taxonomy, Nomenclature, and a New Species with Dark Flowers
inferred← citeshttps://doi.org/10.18257/raccefyn.33(127).2009.2355openalex-snapshot
SINOPSIS DE LA SUBFAMILIA SPIRANTHOIDEAE (ORCHIDACEAE) EN COLOMBIA, PARTE II
inferred← citeshttps://doi.org/10.21597/jist.489021openalex-snapshot
Anadolu Orkidesi’nde (Orchis anatolica Boiss.) Ribozomal DNA’nın Transkripsiyonu Yapılan İç Ara Bölgelerinin (ITS) Özellikleri
inferred← citeshttps://doi.org/10.2478/pbj-2013-0066openalex-snapshot
Four new species of Cranichis (Orchidaceae, Spiranthoideae, Cranichidinae) from Colombia
inferred← citeshttps://doi.org/10.3897/phytokeys.47.8347openalex-snapshot
Plant endemism in the Sierras of Córdoba and San Luis (Argentina): understanding links between phylogeny and regional biogeographical patterns1
inferred← citeshttps://doi.org/10.4067/s0717-66432015000100019openalex-snapshot
Myrosmodes nervosa (Orchidaceae, Cranichidinae, subgenus Myrosmodes): a new combination of Myrosmodes to Chile
inferred← citeshttps://doi.org/10.5735/085.055.0120openalex-snapshot
Exalaria glabriflora (Orchidaceae, Cranichidinae), a New Species from Peru
inferred← citeshttps://doi.org/10.5735/086.050.0505openalex-snapshot
Three New Species of the GenusGomphichis(Orchidaceae, Spiranthoideae) from Colombia
inferred← citeshttps://doi.org/10.7717/peerj.7385openalex-snapshot
Taxonomic revision of the genusCranichis(Orchidaceae, Cranichideae) in Colombia
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