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Phylogenetic study ofCatapyrenium s. str.(Verrucariaceae, lichen-forming Ascomycota) and related genusPlacidiopsis

https://doi.org/10.3852/09-168
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Outgoing claims: the papers this work cites, builds on, or argues with.

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PAUP * [Phylogenetic Analysis Using Parsimony (and Other Methods)]
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Generic classification of the Verrucariaceae (Ascomycota) based on molecular and morphological evidence: recent progress and remaining challenges
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Taxonomy and species delimitation in Sporodictyon (Verrucariaceae) in Northern Europe and the adjacent Arctic—reconciling molecular and morphological data
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Use of rRNA Secondary Structure in Phylogenetic Studies to Identify Homologous Positions: An Example of Alignment and Data Presentation from the Frogs
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Generalized Linear Models
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Generalized Linear Models
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The lichen generaCatapyrenium andPlacidiopsis in Greenland
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Eine neuePlacidiopsis-Art (Lichenes,Verrucariaceae) aus Norwegen und den Alpen
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On the Lichen generaPlacocarpus andPlacidiopsis (Verrucariaceae)
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AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS
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Molecular phylogeny of the genus Lecania (Ramalinaceae, lichenized Ascomycota)
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Using a multigene phylogenetic analysis to assess generic delineation and character evolution in Verrucariaceae (Verrucariales, Ascomycota)
inferredcites →https://doi.org/10.1016/j.mycres.2008.05.002openalex-snapshot
Molecular phylogeny and systematics of Polyblastia (Verrucariaceae, Eurotiomycetes) and allied genera
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Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory
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Phylogenetic comparison of protein-coding versus ribosomal RNA-coding sequence data: A case study of the Lecanoromycetes (Ascomycota)
inferredcites →https://doi.org/10.1016/j.ympev.2006.12.023openalex-snapshot
Phylogenetic diversity of lichen-associated homobasidiomycetes
inferredcites →https://doi.org/10.1016/s0953-7562(09)80409-7openalex-snapshot
Taxonomy and phylogeny of Gliocladium analysed from nuclear large subunit ribosomal DNA sequences
inferredcites →https://doi.org/10.1017/s0024282904014252openalex-snapshot
The Verrucaria fuscella group in Great Britain and Ireland
inferredcites →https://doi.org/10.1017/s0953756203008864openalex-snapshot
A natural classification of Lasiosphaeria based on nuclear LSU rDNA sequences
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Reconstructing the early evolution of Fungi using a six-gene phylogeny
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Outline of phylogeny and character evolution in Rhizocarpon (Rhizocarpaceae, lichenized Ascomycota) based on nuclear ITS and mitochondrial SSU ribosomal DNA sequences
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SAS System for Linear Models
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Approximate Inference in Generalized Linear Mixed Models
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Integrating Ambiguously Aligned Regions of DNA Sequences in Phylogenetic Analyses Without Violating Positional Homology
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New Approach to an Old Problem: Incorporating Signal from Gap-Rich Regions of ITS and rDNA Large Subunit into Phylogenetic Analyses to Resolve the Peltigera canina Species Complex
inferredcites →https://doi.org/10.1093/bioinformatics/17.8.754openalex-snapshot
MRBAYES: Bayesian inference of phylogenetic trees
inferredcites →https://doi.org/10.1093/bioinformatics/btg180openalex-snapshot
MrBayes 3: Bayesian phylogenetic inference under mixed models
inferredcites →https://doi.org/10.1093/bioinformatics/btl446openalex-snapshot
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
inferredcites →https://doi.org/10.1093/sysbio/45.4.524openalex-snapshot
Testing for Phylogenetic Conflict Among Molecular Data Sets in the Tribe Triticeae (Gramineae)
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A likelihood approach to character weighting and what it tells us about parsimony and compatibility
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COMBINATORIAL WEIGHTS IN PHYLOGENETIC ANALYSIS: A STATISTICAL PARSIMONY PROCEDURE
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CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP
inferredcites →https://doi.org/10.1128/jb.172.8.4238-4246.1990openalex-snapshot
Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species
inferredcites →https://doi.org/10.1186/1471-2105-3-2openalex-snapshot
The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
inferredcites →https://doi.org/10.1639/0007-2745(1913)16[1:attlos]2.0.co;2openalex-snapshot
Additions to the Lichenflora of Southern California. 8
inferredcites →https://doi.org/10.1639/0007-2745(2008)111[128:ansoav]2.0.co;2openalex-snapshot
A New Species of Anthracocarpon (Verrucariaceae) from Argentina
inferredcites →https://doi.org/10.2307/1223708openalex-snapshot
The potential of mitochondrial DNA for establishing phylogeny and stabilising generic concepts in the parmelioid lichens
inferredcites →https://doi.org/10.2307/3243269openalex-snapshot
The Lichen Genera Catapyrenium and Placidiopsis in North America
inferredcites →https://doi.org/10.3852/09-114openalex-snapshot
Disentangling theCollema-Leptogiumcomplex through a molecular phylogenetic study of the Collemataceae (Peltigerales, lichen-forming Ascomycota)
inferredcites →https://doi.org/10.5860/choice.39-2183openalex-snapshot
MacClade 4.0: analysis of phylogeny and character evolution

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3897/mycokeys.137.197566zenodo-depositor-declared
Phylogeny and taxonomy of Willeya (Verrucariales, Verrucariaceae), including two new species and two newly recorded species from China
inferred← citeshttps://doi.org/10.1002/tax.581019openalex-snapshot
Generic classification of the Verrucariaceae (Ascomycota) based on molecular and morphological evidence: recent progress and remaining challenges
inferred← citeshttps://doi.org/10.1007/s13225-016-0372-yopenalex-snapshot
Phylogeny, taxonomy and diversification events in the Caliciaceae
inferred← citeshttps://doi.org/10.1007/s13225-017-0386-0openalex-snapshot
Notes for genera: Ascomycota
inferred← citeshttps://doi.org/10.1017/s0024282910000319openalex-snapshot
The genusCatapyreniums. lat. (Verrucariaceae) in the Iberian Peninsula and the Balearic Islands
inferred← citeshttps://doi.org/10.1017/s0024282912000382openalex-snapshot
A new Placopyrenium (Verrucariaceae) from Turkey
inferred← citeshttps://doi.org/10.1017/s0024282914000048openalex-snapshot
Phylogeny and taxonomy ofStaurothele(Verrucariaceae, lichenized ascomycetes) from the karst of northern Vietnam
inferred← citeshttps://doi.org/10.1017/s0024282915000109openalex-snapshot
Development and characterization of fungal specific microsatellite markers in the lichenLobarina scrobiculata(Lobariaceae, Ascomycota)
inferred← citeshttps://doi.org/10.1017/s0024282922000160openalex-snapshot
Verrucariaceae from Nepal
inferred← citeshttps://doi.org/10.1101/2025.01.22.634291openalex-snapshot
Towards a monograph of marine Verrucariaceae in Southern South America and maritime Antarctica: Integrative taxonomy reveals a previously unknown diversity
inferred← citeshttps://doi.org/10.13158/heia.23.2.2010.205openalex-snapshot
An Updated World-Wide Key to the Catapyrenioid Lichens (Verrucariaceae)
inferred← citeshttps://doi.org/10.13158/heia.30.1.2017.177openalex-snapshot
A NewPlacopyreniumSpecies (Ascomycota: Verrucariaceae) from Iran
inferred← citeshttps://doi.org/10.1639/0007-2745-114.1.251openalex-snapshot
Recent literature on lichens—220
inferred← citeshttps://doi.org/10.31111/nsnr/2014.48.327openalex-snapshot
Family Verrucariaceae in Russia. II. Genus Placidiopsis
inferred← citeshttps://doi.org/10.3390/d18090521openalex-snapshot
Siliceous Outcrops Host New Records of Biodiversity Interest for Arctic–Alpine Lichens in the Southern Apennines: An Assessment Based on Field Surveys and Herbarium Data
inferred← citeshttps://doi.org/10.3390/jof8070729openalex-snapshot
Hidden Species Diversity was Explored in Two Genera of Catapyrenioid Lichens (Verrucariaceae, Ascomycota) from the Deserts of China
inferred← citeshttps://doi.org/10.3732/ajb.1100239openalex-snapshot
Molecular phylogeny of Heteroplacidium, Placidium, and related catapyrenioid genera (Verrucariaceae, lichen‐forming Ascomycota)
inferred← citeshttps://doi.org/10.3852/11-066openalex-snapshot
Phylogeny of Chaetothyriaceae in northern Thailand including three new species
inferred← citeshttps://doi.org/10.5209/bocm.81990openalex-snapshot
Preliminary checklist of the lichen-forming and lichenicolous fungi of Castilla-La Mancha (Spain)
inferred← citeshttps://doi.org/10.5248/114.463openalex-snapshot
The genus Placidiopsis in the Iberian Peninsula and the Balearic Islands
inferred← citeshttps://doi.org/10.5962/p.386064openalex-snapshot
A new lichenicolous Heteroplacidium (Verrucariaceae) from the deserts of southern California
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