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How can integrated morphotaxonomy- and metabarcoding-based diatom assemblage analyses best contribute to the ecological assessment of streams?
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/ece3.4701openalex-snapshot
The impact of OTU sequence similarity threshold on diatom‐based bioassessment: A case study of the rivers of Mayotte (France, Indian Ocean)
inferredcites →https://doi.org/10.1007/bf02182405openalex-snapshot
Algae as indicators of environmental change
inferredcites →https://doi.org/10.1007/s10750-012-1281-zopenalex-snapshot
Freshwater biodiversity in the rivers of the Mediterranean Basin
inferredcites →https://doi.org/10.1007/s10750-017-3381-2openalex-snapshot
Metabarcoding of lake benthic diatoms: from structure assemblages to ecological assessment
inferredcites →https://doi.org/10.1007/s10750-021-04718-3openalex-snapshot
Fresh insights into Mediterranean biodiversity: environmental DNA reveals spatio-temporal patterns of stream invertebrate communities on Sicily
inferredcites →https://doi.org/10.1007/s10811-005-4801-7openalex-snapshot
Response of diatom indices to simulated water quality improvements in a river
inferredcites →https://doi.org/10.1007/s10811-008-9394-5openalex-snapshot
Harmonization is more important than experience—results of the first Nordic–Baltic diatom intercalibration exercise 2007 (stream monitoring)
inferredcites →https://doi.org/10.1016/j.ecolind.2017.06.024openalex-snapshot
Assessing ecological status with diatoms DNA metabarcoding: Scaling-up on a WFD monitoring network (Mayotte island, France)
inferredcites →https://doi.org/10.1016/j.ecolind.2019.105470openalex-snapshot
Applicability of DNA metabarcoding approach in the bioassessment of Portuguese rivers using diatoms
inferredcites →https://doi.org/10.1016/j.ecolind.2020.106690openalex-snapshot
Overwhelming role of hydrology-related variables and river types in driving diatom species distribution and community assemblage in streams in Cyprus
inferredcites →https://doi.org/10.1016/j.ecolind.2020.106725openalex-snapshot
Development of a novel metric for evaluating diatom assemblages in rivers using DNA metabarcoding
inferredcites →https://doi.org/10.1016/j.ecolind.2020.107082openalex-snapshot
Benthic algae assessments in the EU and the US: Striving for consistency in the face of great ecological diversity
inferredcites →https://doi.org/10.1016/j.ecolind.2020.107322openalex-snapshot
The potential of exact sequence variants (ESVs) to interpret and assess the impact of agricultural pressure on stream diatom assemblages revealed by DNA metabarcoding
inferredcites →https://doi.org/10.1016/j.scitotenv.2013.11.144openalex-snapshot
Water quality assessment of rivers using diatom metrics across Mediterranean Europe: A methods intercalibration exercise
inferredcites →https://doi.org/10.1016/j.scitotenv.2018.05.002openalex-snapshot
The future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems
inferredcites →https://doi.org/10.1016/j.scitotenv.2020.137900openalex-snapshot
A taxonomy-free approach based on machine learning to assess the quality of rivers with diatoms
inferredcites →https://doi.org/10.1016/j.scitotenv.2020.138445openalex-snapshot
Evaluation and sensitivity analysis of diatom DNA metabarcoding for WFD bioassessment of Mediterranean rivers
inferredcites →https://doi.org/10.1016/j.scitotenv.2020.140948openalex-snapshot
Diatom DNA metabarcoding for ecological assessment: Comparison among bioinformatics pipelines used in six European countries reveals the need for standardization
inferredcites →https://doi.org/10.1016/j.watres.2017.01.062openalex-snapshot
The use of diatoms in ecotoxicology and bioassessment: Insights, advances and challenges
inferredcites →https://doi.org/10.1016/j.watres.2018.03.003openalex-snapshot
Implementation options for DNA-based identification into ecological status assessment under the European Water Framework Directive
inferredcites →https://doi.org/10.1038/s41598-019-51500-6openalex-snapshot
Diat.barcode, an open-access curated barcode library for diatoms
inferredcites →https://doi.org/10.1039/ap9842100196openalex-snapshot
Official Journal of the European Communities
inferredcites →https://doi.org/10.1073/pnas.1509523113openalex-snapshot
Insights into global diatom distribution and diversity in the world’s ocean
inferredcites →https://doi.org/10.1080/0269249x.2013.833136openalex-snapshot
Morphological and molecular phylogenetic studies onFistulifera saprophila
inferredcites →https://doi.org/10.1080/0269249x.2017.1312548openalex-snapshot
Planothidium lanceolatum and Planothidium frequentissimum reinvestigated with molecular methods and morphology: four new species and the taxonomic importance of the sinus and cavum
inferredcites →https://doi.org/10.1080/09670262.2017.1283540openalex-snapshot
Molecular and morphological characterization of the Achnanthidium minutissimum complex (Bacillariophyta) in Petuniabukta (Spitsbergen, High Arctic) including the description of A. digitatum sp. nov.
inferredcites →https://doi.org/10.1086/690649openalex-snapshot
Application of high-throughput sequencing (HTS) metabarcoding to diatom biomonitoring: Do DNA extraction methods matter?
inferredcites →https://doi.org/10.1111/1755-0998.12919openalex-snapshot
Boosting DNA metabarcoding for biomonitoring with phylogenetic estimation of operational taxonomic units’ ecological profiles
inferredcites →https://doi.org/10.1111/2041-210x.12960openalex-snapshot
Avoiding quantification bias in metabarcoding: Application of a cell biovolume correction factor in diatom molecular biomonitoring
inferredcites →https://doi.org/10.1111/j.1365-2427.2006.01610.xopenalex-snapshot
Assessment of European streams with diatoms, macrophytes, macroinvertebrates and fish: a comparative metric‐based analysis of organism response to stress
inferredcites →https://doi.org/10.1111/jeu.12047openalex-snapshot
An Inordinate Fondness? The Number, Distributions, and Origins of Diatom Species
inferredcites →https://doi.org/10.1111/mec.15646openalex-snapshot
Monitoring the ecological status of rivers with diatom eDNA metabarcoding: A comparison of taxonomic markers and analytical approaches for the inference of a molecular diatom index
inferredcites →https://doi.org/10.1111/mec.16364openalex-snapshot
Meta‐analysis shows both congruence and complementarity of DNA and eDNA metabarcoding to traditional methods for biological community assessment
inferredcites →https://doi.org/10.1128/aem.01541-09openalex-snapshot
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
inferredcites →https://doi.org/10.1139/cjfas-55-6-1443openalex-snapshot
Monitoring organic pollution and eutrophication in the Grand River, Ontario, by means of diatoms
inferredcites →https://doi.org/10.11646/phytotaxa.346.1.4openalex-snapshot
Taxonomic and ecological characterization of two Ulnaria species (Bacillariophyta) from streams in Cyprus
inferredcites →https://doi.org/10.12681/mms.17293openalex-snapshot
Taxonomy and distribution of diatoms on the Turkish Mediterranean Coast, Dalyan (Muğla)
inferredcites →https://doi.org/10.1371/journal.pone.0236513openalex-snapshot
Geographical variation in the diatom communities associated with loggerhead sea turtles (Caretta caretta)
inferredcites →https://doi.org/10.15454/tombyzopenalex-snapshot
Diat.barcode, an open-access barcode library for diatoms
inferredcites →https://doi.org/10.1899/08-171.1openalex-snapshot
Freshwater biodiversity conservation: recent progress and future challenges
inferredcites →https://doi.org/10.2307/2256507openalex-snapshot
Studies in the Ecology of Rivers: VII. The Algae of Organically Enriched Waters
inferredcites →https://doi.org/10.3390/w13040478openalex-snapshot
Benthic Diatoms in River Biomonitoring—Present and Future Perspectives within the Water Framework Directive
inferredcites →https://doi.org/10.3897/mbmg.3.34002openalex-snapshot
Molecular versus morphological data for benthic diatoms biomonitoring in Northern Europe freshwater and consequences for ecological status
inferredcites →https://doi.org/10.3897/mbmg.3.39646openalex-snapshot
Assessing pollution of aquatic environments with diatoms’ DNA metabarcoding: experience and developments from France water framework directive networks
inferredcites →https://doi.org/10.4314/wsa.v42i2.02openalex-snapshot
Assessment of water quality based on diatom indices in a small temperate river system, Kowie River, South Africa
inferredcites →https://doi.org/10.5507/fot.2016.013openalex-snapshot
A new Navicula (Bacillariophyta) species from low-elevation carbonate springs affected by anthropogenic disturbance
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← backgroundhttps://doi.org/10.3897/mbmg.5.68438.suppl1zenodo-depositor-declared
Supplementary material 1 from: Pissaridou P, Cantonati M, Bouchez A, Tziortzis I, Dörflinger G, Vasquez MI (2021) How can integrated morphotaxonomy- and metabarcoding-based diatom assemblage analyses best contribute to the ecological assessment of streams? Metabarcoding and Metagenomics 5: e68438.…
inferred← backgroundhttps://doi.org/10.3897/mbmg.5.68438.suppl2zenodo-depositor-declared
Supplementary material 2 from: Pissaridou P, Cantonati M, Bouchez A, Tziortzis I, Dörflinger G, Vasquez MI (2021) How can integrated morphotaxonomy- and metabarcoding-based diatom assemblage analyses best contribute to the ecological assessment of streams? Metabarcoding and Metagenomics 5: e68438.…
inferred← citeshttps://doi.org/10.1002/9781119842156.ch12openalex-snapshot
Present and Future Perspectives for Bioassessment of Running Water Using Diatoms
inferred← citeshttps://doi.org/10.1016/j.marenvres.2024.106623openalex-snapshot
Environmental DNA metabarcoding reveals diverse phytoplankton assemblages and potentially harmful algal distribution along the urban coasts of Türkiye
inferred← citeshttps://doi.org/10.1080/0269249x.2023.2233515openalex-snapshot
Names, diagnoses and ‘Dead Names’: the case of Synedra pelagica
inferred← citeshttps://doi.org/10.3390/biology12071038openalex-snapshot
Genetic Markers for Metabarcoding of Freshwater Microalgae: Review
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