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Structural characterization of ITS2 and CBC species concept applications in the tribe Coluteocarpeae (Brassicaceae)

https://doi.org/10.3906/bot-1911-4

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/fedr.4910840503openalex-snapshot

Conspectus der „Thlaspi”-Arten Europas, Afrikas und Vorderasiens

inferredcites →https://doi.org/10.1002/tax.615002openalex-snapshot

A generic and tribal synopsis of the Brassicaceae (Cruciferae)

inferredcites →https://doi.org/10.1006/jmbi.1999.2700openalex-snapshot

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

inferredcites →https://doi.org/10.1007/pl00006143openalex-snapshot

The Internal Transcribed Spacer 2 Exhibits a Common Secondary Structure in Green Algae and Flowering Plants

inferredcites →https://doi.org/10.1007/pl00006398openalex-snapshot

Trematode and Monogenean rRNA ITS2 Secondary Structures Support a Four-Domain Model

inferredcites →https://doi.org/10.1007/s00239-001-0006-0openalex-snapshot

Exploring the Phylogenetic Utility of ITS Sequences for Animals: A Test Case for Abalone (Haliotis)

inferredcites →https://doi.org/10.1007/s00606-006-0415-zopenalex-snapshot

Systematics and phylogeny of the Brassicaceae (Cruciferae): an overview

inferredcites →https://doi.org/10.1007/s00606-009-0213-5openalex-snapshot

Contribution to ITS phylogeny of the Brassicaceae, with special reference to some Asian taxa

inferredcites →https://doi.org/10.1007/s00606-010-0271-8openalex-snapshot

Closing the gaps: phylogenetic relationships in the Brassicaceae based on DNA sequence data of nuclear ribosomal ITS region

inferredcites →https://doi.org/10.1016/b978-0-12-372180-8.50042-1openalex-snapshot

AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS

inferredcites →https://doi.org/10.1016/j.bse.2009.01.010openalex-snapshot

Phylogenetic relationships of Old World Brassicaceae from Iran based on nuclear ribosomal DNA sequences

inferredcites →https://doi.org/10.1016/j.bse.2016.03.008openalex-snapshot

The characterisation and taxonomic utility of ITS2 in Tenthredopsis Costa, 1859 (Tenthredinidae: Hymenoptera) with some new records from Turkey

inferredcites →https://doi.org/10.1016/j.fgb.2009.08.001openalex-snapshot

Evolution of rDNA ITS1 and ITS2 sequences and RNA secondary structures within members of the fungal genera Grosmannia and Leptographium

inferredcites →https://doi.org/10.1016/j.flora.2016.09.008openalex-snapshot

Microthlaspi erraticum (Jord.) T. Ali et Thines has a wide distribution, ranging from the Alps to the Tien Shan

inferredcites →https://doi.org/10.1016/j.gene.2014.05.065openalex-snapshot

ITS2, 18S, 16S or any other RNA — simply aligning sequences and their individual secondary structures simultaneously by an automatic approach

inferredcites →https://doi.org/10.1016/j.ympev.2008.10.008openalex-snapshot

Is there a molecular key to the level of “biological species” in eukaryotes? A DNA guide

inferredcites →https://doi.org/10.1016/j.ympev.2012.01.026openalex-snapshot

ITS2 Database IV: Interactive taxon sampling for internal transcribed spacer 2 based phylogenies

inferredcites →https://doi.org/10.1016/j.ympev.2014.06.015openalex-snapshot

Gorgonia mariae and Antillogorgia bipinnata populations inferred from compensatory base change analysis of the internal transcribed spacer 2

inferredcites →https://doi.org/10.1080/01916122.2018.1463571openalex-snapshot

Pollen morphology of some taxa of Thlaspi L. sensu lato (Brassicaceae) from Turkey, and its taxonomical importance

inferredcites →https://doi.org/10.1086/314194openalex-snapshot

Evolutionary Changes in Floral Structure withinLepidiumL. (Brassicaceae)

inferredcites →https://doi.org/10.1093/bioinformatics/btm404openalex-snapshot

Clustal W and Clustal X version 2.0

inferredcites →https://doi.org/10.1093/bioinformatics/btp250openalex-snapshot

VARNA: Interactive drawing and editing of the RNA secondary structure

inferredcites →https://doi.org/10.1093/bioinformatics/btq706openalex-snapshot

phangorn: phylogenetic analysis in R

inferredcites →https://doi.org/10.1093/molbev/msp202openalex-snapshot

Molecular Phylogenetics, Temporal Diversification, and Principles of Evolution in the Mustard Family (Brassicaceae)

inferredcites →https://doi.org/10.1093/molbev/msv174openalex-snapshot

ITS2 Database V: Twice as Much: Table 1.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040480openalex-snapshot

Paired sequence difference in ribosomal RNAs: evolutionary and phylogenetic implications.

inferredcites →https://doi.org/10.1111/j.1095-8339.1997.tb02253.xopenalex-snapshot

Molecular data reveal convergence in fruit characters used in the classification of Thlaspi s. l. (Brassicaceae)

inferredcites →https://doi.org/10.1111/j.1095-8339.2006.00472.xopenalex-snapshot

A new species of Noccaea (Brassicaceae) from South Anatolia, Turkey

inferredcites →https://doi.org/10.1111/j.1438-8677.1995.tb00520.xopenalex-snapshot

Allopolyploid Origin of Arabidopsis suecica (Fries) Norrlin: Evidence from Chloroplast and Nuclear Genome Markers

inferredcites →https://doi.org/10.1111/j.1759-6831.2009.00022.xopenalex-snapshot

Notes on the family Brassicaceae in China

inferredcites →https://doi.org/10.1111/jse.12221openalex-snapshot

Ribosomal DNA ITS1, 5.8S and ITS2 secondary structure, nuclear DNA content and phytochemical analyses reveal distinctive characteristics of four subclades of Protasparagus

inferredcites →https://doi.org/10.1139/b97-051openalex-snapshot

Molecular phylogenetics ofThlaspis.l. (Brassicaceae) based on chloroplast DNA restriction site variation and sequences of the internal transcribed spacers of nuclear ribosomal DNA

inferredcites →https://doi.org/10.1146/annurev.genet.33.1.261openalex-snapshot

Ribosome Synthesis in Saccharomyces cerevisiae

inferredcites →https://doi.org/10.11646/phytotaxa.178.4.2openalex-snapshot

Phylogenetic position and taxonomic assignment of Thlaspi aghricum P.H.Davis & K.Tan (Brassicaceae)

inferredcites →https://doi.org/10.11646/phytotaxa.297.3.12openalex-snapshot

What is Cochlearia venusta (Cruciferae)?

inferredcites →https://doi.org/10.11646/phytotaxa.336.3.2openalex-snapshot

A new perennial Erysimum species from Turkey, E. nemrutdaghense (Brassicaceae)

inferredcites →https://doi.org/10.11646/phytotaxa.344.2.5openalex-snapshot

Phylogenetic position, taxonomy, distribution, and conservation status of the rare and poorly-known Noccaea rosularis, the generic type of Masmenia (Brassicaceae)

inferredcites →https://doi.org/10.11646/phytotaxa.345.1.7openalex-snapshot

Noccaea birolmutlui, a New Crucifer Species from South West Anatolia, Turkey

inferredcites →https://doi.org/10.11646/phytotaxa.346.3.4openalex-snapshot

Contributions to Turkish Flora: Taxonomic and distributional notes on the poorly known Noccaea (Brassicaceae) species

inferredcites →https://doi.org/10.11646/phytotaxa.383.1.6openalex-snapshot

Taxonomic remarks on Pseudosempervivum (Brassicaceae)

inferredcites →https://doi.org/10.11646/phytotaxa.432.1.8openalex-snapshot

A new species of Noccaea (Brassicaceae) from central Anatolia

inferredcites →https://doi.org/10.1186/1471-2105-7-498openalex-snapshot

4SALE – A tool for synchronous RNA sequence and secondary structure alignment and editing

inferredcites →https://doi.org/10.1186/1745-6150-5-4openalex-snapshot

Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees

inferredcites →https://doi.org/10.1261/rna.617107openalex-snapshot

Distinguishing species

inferredcites →https://doi.org/10.1261/rna.7204505openalex-snapshot

A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota

inferredcites →https://doi.org/10.12705/651.6openalex-snapshot

Morphology, phylogeny, and taxonomy of Microthlaspi (Brassicaceae: Coluteocarpeae) and related genera

inferredcites →https://doi.org/10.1371/journal.pone.0066726openalex-snapshot

Compensatory Base Changes in ITS2 Secondary Structures Correlate with the Biological Species Concept Despite Intragenomic Variability in ITS2 Sequences – A Proof of Concept

inferredcites →https://doi.org/10.1371/journal.pone.0101341openalex-snapshot

Secondary Structure Analyses of the Nuclear rRNA Internal Transcribed Spacers and Assessment of Its Phylogenetic Utility across the Brassicaceae (Mustards)

inferredcites →https://doi.org/10.1600/036364404774195566openalex-snapshot

Taxonomic and Phylogenetic Evaluation of the American "Thlaspi" Species: Identity and Relationship to the Eurasian Genus Noccaea (Brassicaceae)

inferredcites →https://doi.org/10.2307/1223220openalex-snapshot

Should Thlaspi (Brassicaceae) be split? Preliminary evidence from isoelectric focusing analysis of Rubisco

inferredcites →https://doi.org/10.2307/3298580openalex-snapshot

Molecular Systematics, Evolution, and Population Biology in the Mustard Family (Brassicaceae)

inferredcites →https://doi.org/10.2307/3558431openalex-snapshot

Chloroplast DNA phylogeny and biogeography of Lepidium (Brassicaceae)

inferredcites →https://doi.org/10.3100/hpib.v19iss1.2014.n3openalex-snapshot

A Synopsis of the Genus Noccaea (coluteocarpeae, Brassicaceae)

inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot

R: A Language and Environment for Statistical Computing

inferredcites →https://doi.org/10.3417/2019347openalex-snapshot

Phylogeny of the Genus Noccaea (Brassicaceae) and a Critical Review of its Generic Circumscription

inferredcites →https://doi.org/10.3732/ajb.91.2.254openalex-snapshot

Molecular evidence for bicontinental hybridogenous genomic constitution in Lepidium sensu stricto (Brassicaceae) species from Australia and New Zealand

inferredcites →https://doi.org/10.3906/bot-1006-40openalex-snapshot

Phylogenetic relationships between Malcolmia, Strigosella, Zuvanda, and some closely related genera (Brassicaceae) from Turkey revealed by inter-simple sequence repeat amplification

inferredcites →https://doi.org/10.3906/bot-1709-28openalex-snapshot

Seed structure and its taxonomic implications for genus Thlaspi sensu lato sections Nomisma , Thlaspi , and Pterotropis (Brassicaceae

inferredcites →https://doi.org/10.3906/bot-1712-52openalex-snapshot

Resolving the position of Astragalus borysthenicus Klokov within the Astragalus L. species

inferredcites →https://doi.org/10.3906/bot-1805-40openalex-snapshot

Noccaea ali-atahanii (Brassicaceae): a new species from southern Anatolia

inferredcites →https://doi.org/10.5507/fot.2016.010openalex-snapshot

Selenastraceae (Sphaeropleales, Chlorophyceae): rbcL, 18S rDNA and ITS-2 secondary structure enlightens traditional taxonomy, with description of two new genera, Messastrum gen. nov. and Curvastrum gen. nov.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/phytotaxa.555.2.11zenodo-depositor-declared

Noccaea klimesii (Coluteocarpeae; Brassicaceae), a new species from Ladakh, India

inferred← citeshttps://doi.org/10.1002/tax.13329openalex-snapshot

Diversity, taxonomic delimitation, and character evolution of the subfamily Makinoelloideae (Oocystaceae, Trebouxiophyceae, Chlorophyta)

inferred← citeshttps://doi.org/10.1080/00318884.2026.2695359openalex-snapshot

Morphological and molecular characterization of Apatococcus echinosporus sp. nov . (Trebouxiophyceae, Chlorophyta) isolated from rainwater

inferred← citeshttps://doi.org/10.1139/cjb-2020-0184openalex-snapshot

Species delimitation in Noccaea densiflora species complex (Brassicaceae) based on morphological and molecular data

inferred← citeshttps://doi.org/10.1371/journal.pone.0283847openalex-snapshot

Characterizing nrDNA ITS1, 5.8S and ITS2 secondary structures and their phylogenetic utility in the legume tribe Hedysareae with special reference to Hedysarum

inferred← citeshttps://doi.org/10.1590/1983-40632024v5478330openalex-snapshot

Genetic diversity of cultivated mangosteen and its wild relatives (Garcinia spp.) based on leaf morphology and molecular markers1

inferred← citeshttps://doi.org/10.53447/communc.820287openalex-snapshot

CHARACTERIZATION OF ITS1 SECONDARY STRUCTURE IN TEN SPECIES OF COLUTEOCARPEAE (BRASSICACEAE) AND ITS TAXONOMICAL UTILITY

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