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GridBLAST: a Globus-based high-throughput implementation of BLAST in a Grid computing framework
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1006/jmbi.1990.9999openalex-snapshot
Basic Local Alignment Search Tool
inferredcites →https://doi.org/10.1016/0888-7543(90)90583-gopenalex-snapshot
The National Center for Biotechnology Information
inferredcites →https://doi.org/10.1093/bioinformatics/16.6.564openalex-snapshot
Disperse: a simple and efficient approach to parallel database searching
inferredcites →https://doi.org/10.1093/nar/gkh120openalex-snapshot
The EMBL Nucleotide Sequence Database
inferredcites →https://doi.org/10.1145/369028.369109openalex-snapshot
Application-level scheduling on distributed heterogeneous networks
inferredcites →https://doi.org/10.1177/109434209701100205openalex-snapshot
Globus: a Metacomputing Infrastructure Toolkit
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1002/biot.200800073openalex-snapshot
Changing from computing grid to knowledge grid in life‐science grid
inferred← citeshttps://doi.org/10.1002/cpe.1346openalex-snapshot
G‐BLAST: a Grid‐based solution for mpiBLAST on computational Grids
inferred← citeshttps://doi.org/10.1002/cpe.3117openalex-snapshot
A performance/cost model for a CUDA drug discovery application on physical and public cloud infrastructures
inferred← citeshttps://doi.org/10.1002/cpe.3834openalex-snapshot
Balancing push and pull in Confuga, an active storage cluster file system for scientific workflows
inferred← citeshttps://doi.org/10.1007/11733836_58openalex-snapshot
How to BLAST Your Database — A Study of Stored Procedures for BLAST Searches
inferred← citeshttps://doi.org/10.1007/978-1-4939-1905-5_15openalex-snapshot
Storage and Data Life Cycle Management in Cloud Environments with FRIEDA
inferred← citeshttps://doi.org/10.1007/978-3-319-12718-7_1openalex-snapshot
GeneCloud: Secure Cloud Computing for Biomedical Research
inferred← citeshttps://doi.org/10.1007/978-3-319-12718-7_16openalex-snapshot
Privacy-Preserving Cloud Computing for Biomedical Research
inferred← citeshttps://doi.org/10.1007/bf03040950openalex-snapshot
A survey of life sciences applications on the grid
inferred← citeshttps://doi.org/10.1007/s10586-010-0121-zopenalex-snapshot
Exploiting performance characterization of BLAST in the grid
inferred← citeshttps://doi.org/10.1007/s10766-013-0288-zopenalex-snapshot
An Adaptive and Memory Efficient Sampling Mechanism for Partitioning in MapReduce
inferred← citeshttps://doi.org/10.1007/s11227-013-0924-9openalex-snapshot
An improved partitioning mechanism for optimizing massive data analysis using MapReduce
inferred← citeshttps://doi.org/10.1007/s11227-024-06041-9openalex-snapshot
The Egyptian national HPC grid (EN-HPCG): open-source Slurm implementation from cluster to grid approach
inferred← citeshttps://doi.org/10.1007/s11265-007-0065-6openalex-snapshot
Grid-Enabled BLASTZ: Application to Comparative Genomics
inferred← citeshttps://doi.org/10.1007/s13721-015-0096-zopenalex-snapshot
SEAL: a divide-and-conquer approach for sequence alignment
inferred← citeshttps://doi.org/10.1016/b978-0-12-809633-8.20372-5openalex-snapshot
Infrastructure for High-Performance Computing: Grids and Grid Computing
inferred← citeshttps://doi.org/10.1016/j.csbj.2017.07.002openalex-snapshot
Scalability and Validation of Big Data Bioinformatics Software
inferred← citeshttps://doi.org/10.1016/j.future.2006.07.010openalex-snapshot
Electron tomography of complex biological specimens on the Grid
inferred← citeshttps://doi.org/10.1016/j.jpdc.2009.02.009openalex-snapshot
An adaptive multi-policy grid service for biological sequence comparison
inferred← citeshttps://doi.org/10.1016/j.jss.2010.01.051openalex-snapshot
Bioinformatics algorithm development for Grid environments
inferred← citeshttps://doi.org/10.1016/j.parco.2007.02.002openalex-snapshot
Parameter optimization in 3D reconstruction on a large scale grid
inferred← citeshttps://doi.org/10.1093/bioinformatics/btm086openalex-snapshot
ABCGrid: Application for Bioinformatics Computing Grid
inferred← citeshttps://doi.org/10.1109/biotechno.2008.32openalex-snapshot
"Blast Those Sequences': A Gridified Framework for Bioinformatics Blast Using the A3pviGrid
inferred← citeshttps://doi.org/10.1109/ccgrid.2006.1630938openalex-snapshot
Cluster and Grid Based Classification of Transposable Elements in Eukaryotic Genomes
inferred← citeshttps://doi.org/10.1109/ccgrid.2009.91openalex-snapshot
BLAST Application with Data-Aware Desktop Grid Middleware
inferred← citeshttps://doi.org/10.1109/cloud.2011.60openalex-snapshot
Implementation of a Scalable Next Generation Sequencing Business Cloud Platform--An Experience Report
inferred← citeshttps://doi.org/10.1109/clustr.2009.5289186openalex-snapshot
Batch queue resource scheduling for workflow applications
inferred← citeshttps://doi.org/10.1109/escience.2008.62openalex-snapshot
CloudBLAST: Combining MapReduce and Virtualization on Distributed Resources for Bioinformatics Applications
inferred← citeshttps://doi.org/10.1109/gcc.2006.33openalex-snapshot
BioGridPSE: Integrated Solution for Bioinformatics Analysis Using Computing and Data Grid
inferred← citeshttps://doi.org/10.1109/hpcc.2008.139openalex-snapshot
p2pBIOFOCO: Proposing a Peer-to-Peer System for Distributed BLAST Execution
inferred← citeshttps://doi.org/10.1109/icde.2005.171openalex-snapshot
A Service-oriented Approach for the Parallelization of Data-intensive Algorithms in a Grid-enabled Cluster
inferred← citeshttps://doi.org/10.1109/icppw.2009.37openalex-snapshot
Biodoop: Bioinformatics on Hadoop
inferred← citeshttps://doi.org/10.1109/ipdps.2006.1639529openalex-snapshot
A multiple task allocation framework for biological sequence comparison in a grid environment
inferred← citeshttps://doi.org/10.1109/memb.2009.932910openalex-snapshot
Comparative genomic workflow
inferred← citeshttps://doi.org/10.1109/sc.companion.2012.132openalex-snapshot
FRIEDA: Flexible Robust Intelligent Elastic Data Management in Cloud Environments
inferred← citeshttps://doi.org/10.1109/tnb.2010.2043851openalex-snapshot
Toward High-Throughput, Multicriteria Protein-Structure Comparison and Analysis
inferred← citeshttps://doi.org/10.1109/tpds.2008.95openalex-snapshot
A Decentralized Method for Scaling Up Genome Similarity Search Services
inferred← citeshttps://doi.org/10.1145/1341811.1341853openalex-snapshot
Experiences with developing and deploying dynamic BLAST
inferred← citeshttps://doi.org/10.1145/2401603.2401624openalex-snapshot
A framework for readapting and running bioinformatics applications in the cloud
inferred← citeshttps://doi.org/10.1186/1471-2105-7-s5-s10openalex-snapshot
Trends in life science grid: from computing grid to knowledge grid
inferred← citeshttps://doi.org/10.18174/499180openalex-snapshot
Application of high performance compute technology in bioinformatics
inferred← citeshttps://doi.org/10.3844/jcssp.2015.490.497openalex-snapshot
A Modified Key Partitioning for BigData Using MapReduce in Hadoop
inferred← citeshttps://doi.org/10.4018/978-1-4666-0879-5.ch4.9openalex-snapshot
Data Mining in Proteomics Using Grid Computing
inferred← citeshttps://doi.org/10.4018/978-1-4666-0879-5.ch409openalex-snapshot
Data Mining in Proteomics Using Grid Computing
inferred← citeshttps://doi.org/10.4018/978-1-60566-374-6.ch013openalex-snapshot
Data Mining in Proteomics Using Grid Computing
inferred← citeshttps://doi.org/10.5555/1898699.1898756openalex-snapshot
A mltiple task allocation frame work for biological seqence comparision in a grid environment
inferred← citeshttps://doi.org/10.7274/j9601z42w7ropenalex-snapshot
Data Locality Techniques in an Active Cluster File System Designed for Scientific Workflows
inferred← citeshttps://doi.org/10.7717/peerj.3486openalex-snapshot
Divide and Conquer (DC) BLAST: fast and easy BLAST execution within HPC environments
inferred← citeshttps://doi.org/10.9790/0661-1468993openalex-snapshot
Paralyzing Bioinformatics Applications Using Conducive Hadoop Cluster
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