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Biodiversity assessment across a dynamic riverine system: A comparison of eDNA metabarcoding versus traditional fish surveying methods

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/aqc.3163openalex-snapshot

Fish diversity assessment in the headwaters of the Volga River using environmental DNA metabarcoding

inferredcites →https://doi.org/10.1002/edn3.111openalex-snapshot

Comparing environmental metabarcoding and trawling survey of demersal fish communities in the Gulf of St. Lawrence, Canada

inferredcites →https://doi.org/10.1002/edn3.129openalex-snapshot

Fine‐scale environmental heterogeneity shapes fluvial fish communities as revealed by eDNA metabarcoding

inferredcites →https://doi.org/10.1002/edn3.132openalex-snapshot

Environmental DNA metabarcoding for biodiversity monitoring of a highly diverse tropical fish community in a coral reef lagoon: Estimation of species richness and detection of habitat segregation

inferredcites →https://doi.org/10.1002/edn3.135openalex-snapshot

Using environmental DNA for biomonitoring of freshwater fish communities: Comparison with established gillnet surveys in a boreal hydroelectric impoundment

inferredcites →https://doi.org/10.1002/edn3.136openalex-snapshot

Application of eDNA metabarcoding in a fragmented lowland river: Spatial and methodological comparison of fish species composition

inferredcites →https://doi.org/10.1002/edn3.160openalex-snapshot

Environmental conditions influence eDNA particle size distribution in aquatic systems

inferredcites →https://doi.org/10.1002/edn3.171openalex-snapshot

Lateral and longitudinal fish environmental DNA distribution in dynamic riverine habitats

inferredcites →https://doi.org/10.1002/edn3.221openalex-snapshot

Fish community shifts along a strong fluvial environmental gradient revealed by eDNA metabarcoding

inferredcites →https://doi.org/10.1002/edn3.224openalex-snapshot

Proper environmental DNA metabarcoding data transformation reveals temporal stability of fish communities in a dendritic river system

inferredcites →https://doi.org/10.1002/edn3.33openalex-snapshot

Assessing different components of diversity across a river network using eDNA

inferredcites →https://doi.org/10.1002/edn3.43openalex-snapshot

Testing the performance of environmental DNA metabarcoding for surveying highly diverse tropical fish communities: A case study from Lake Tanganyika

inferredcites →https://doi.org/10.1002/edn3.49openalex-snapshot

Water stratification in the marine biome restricts vertical environmental DNA (eDNA) signal dispersal

inferredcites →https://doi.org/10.1002/edn3.5openalex-snapshot

Temporal and spatial variation in distribution of fish environmental DNA in England’s largest lake

inferredcites →https://doi.org/10.1002/edn3.76openalex-snapshot

Validating environmental DNA metabarcoding for marine fishes in diverse ecosystems using a public aquarium

inferredcites →https://doi.org/10.1002/edn3.87openalex-snapshot

A drop in the ocean: Monitoring fish communities in spawning areas using environmental DNA

inferredcites →https://doi.org/10.1002/edn3.88openalex-snapshot

Caged fish experiment and hydrodynamic bidimensional modeling highlight the importance to consider 2D dispersion in fluvial environmental DNA studies

inferredcites →https://doi.org/10.1002/lom3.10221openalex-snapshot

Open the SterivexTM casing: An easy and effective way to improve DNA extraction yields

inferredcites →https://doi.org/10.1002/rrr.3450020315openalex-snapshot

Fish and fisheries of regulated rivers in the UK

inferredcites →https://doi.org/10.1006/jfbi.2002.2068openalex-snapshot

Fish and fisheries of the tidal Thames: management of the modern resource, research aims and future pressures

inferredcites →https://doi.org/10.1007/s10641-007-9202-0openalex-snapshot

Comparison of visual survey and seining methods for estimating abundance of an endangered, benthic stream fish

inferredcites →https://doi.org/10.1007/s12237-014-9846-xopenalex-snapshot

True Value of Estuarine and Coastal Nurseries for Fish: Incorporating Complexity and Dynamics

inferredcites →https://doi.org/10.1007/s12237-019-00544-yopenalex-snapshot

A Model-Based Analysis of Metal Fate in the Thames Estuary

inferredcites →https://doi.org/10.1007/s40071-017-0174-1openalex-snapshot

Baseline survey of the fish fauna of a highly eutrophic estuary and evidence for its colonisation by Goldfish (Carassius auratus)

inferredcites →https://doi.org/10.1016/b978-0-444-53868-0.50018-6openalex-snapshot

References

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Restoration versus recolonisation: The origin of Atlantic salmon (Salmo salar L.) currently in the River Thames

inferredcites →https://doi.org/10.1016/j.biocon.2016.03.010openalex-snapshot

Comparison of environmental DNA metabarcoding and conventional fish survey methods in a river system

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Elements of metacommunity structure of river and riparian assemblages: Communities, taxonomic groups and deconstructed trait groups

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The use of environmental DNA of fishes as an efficient method of determining habitat connectivity

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High-throughput environmental DNA analysis informs a biological assessment of an urban stream

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Relationships between suspended particulate material, light attenuation and Secchi depth in UK marine waters

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Freshwater fisheries assessment using environmental DNA: A primer on the method, its potential, and shortcomings as a conservation tool

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Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global eDNA

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Detection and identification of lampreys in Great Lakes streams using environmental DNA

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Implications of using a variety of fishing strategies and sampling techniques across different biotopes to determine fish species composition and diversity

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The fine sediment regime of the Thames Estuary – A clearer understanding

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Space-time dynamics in monitoring neotropical fish communities using eDNA metabarcoding

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Implementation options for DNA-based identification into ecological status assessment under the European Water Framework Directive

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Fish

inferredcites →https://doi.org/10.1021/acs.est.6b01761openalex-snapshot

Influence of Stream Bottom Substrate on Retention and Transport of Vertebrate Environmental DNA

inferredcites →https://doi.org/10.1021/acs.est.8b01822openalex-snapshot

Water Flow and Biofilm Cover Influence Environmental DNA Detection in Recirculating Streams

inferredcites →https://doi.org/10.1038/ncomms12544openalex-snapshot

Environmental DNA reveals that rivers are conveyer belts of biodiversity information

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DADA2: High-resolution sample inference from Illumina amplicon data

inferredcites →https://doi.org/10.1038/s41598-018-28424-8openalex-snapshot

Environmental DNA reveals quantitative patterns of fish biodiversity in large rivers despite its downstream transportation

inferredcites →https://doi.org/10.1038/s41598-019-47899-7openalex-snapshot

Detection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water

inferredcites →https://doi.org/10.1038/s42003-017-0005-3openalex-snapshot

Acidity promotes degradation of multi-species environmental DNA in lotic mesocosms

inferredcites →https://doi.org/10.1038/s42003-018-0192-6openalex-snapshot

Persistence of environmental DNA in marine systems

inferredcites →https://doi.org/10.1038/srep15894openalex-snapshot

A DNA Mini-Barcoding System for Authentication of Processed Fish Products

inferredcites →https://doi.org/10.1038/srep40368openalex-snapshot

Environmental DNA metabarcoding reveals local fish communities in a species-rich coastal sea

inferredcites →https://doi.org/10.1093/biosci/biaa002openalex-snapshot

Bending the Curve of Global Freshwater Biodiversity Loss: An Emergency Recovery Plan

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Insights on Species Richness and Turnover from Long-Term Ecological Research: Fishes in North Temperate Lakes

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ecoPrimers: inference of new DNA barcode markers from whole genome sequence analysis

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Barcoding Bamboozled by Bacteria: Convergence to Metazoan Mitochondrial Primer Targets by Marine Microbes

inferredcites →https://doi.org/10.1098/rsbl.2014.0562openalex-snapshot

DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match

inferredcites →https://doi.org/10.1098/rsos.150088openalex-snapshot

MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species

inferredcites →https://doi.org/10.1098/rspb.2002.2218openalex-snapshot

Biological identifications through DNA barcodes

inferredcites →https://doi.org/10.1111/1365-2664.12428openalex-snapshot

The downside of eDNA as a survey tool in water bodies

inferredcites →https://doi.org/10.1111/1755-0998.12159openalex-snapshot

Factors influencing detection of eDNA from a stream‐dwelling amphibian

inferredcites →https://doi.org/10.1111/1755-0998.12900openalex-snapshot

Unlocking biodiversity and conservation studies in high‐diversity environments using environmental DNA (eDNA): A test with Guianese freshwater fishes

inferredcites →https://doi.org/10.1111/1755-0998.13354openalex-snapshot

Complex interactions between environmental DNA (eDNA) state and water chemistries on eDNA persistence suggested by meta‐analyses

inferredcites →https://doi.org/10.1111/2041-210x.12849openalex-snapshot

Scrutinizing key steps for reliable metabarcoding of environmental samples

inferredcites →https://doi.org/10.1111/2041-210x.13087openalex-snapshot

Vascular plant species richness and bioindication predict multi‐taxon species richness

inferredcites →https://doi.org/10.1111/2041-210x.13276openalex-snapshot

Non‐specific amplification compromises environmental DNA metabarcoding with COI

inferredcites →https://doi.org/10.1111/2041-210x.13485openalex-snapshot

A comprehensive and comparative evaluation of primers for metabarcoding eDNA from fish

inferredcites →https://doi.org/10.1111/j.1095-8649.1973.tb04430.xopenalex-snapshot

The scarcer freshwater fishes of the British Isles

inferredcites →https://doi.org/10.1111/j.1095-8649.1985.tb04009.xopenalex-snapshot

Rare and little‐known fishes in the Thames Estuary

inferredcites →https://doi.org/10.1111/j.1095-8649.1990.tb05029.xopenalex-snapshot

Rare British marine fishes‐identification and conservation

inferredcites →https://doi.org/10.1111/j.1095-8649.2008.02080.xopenalex-snapshot

The campaign to DNA barcode all fishes, FISH‐BOL

inferredcites →https://doi.org/10.1111/j.1095-8649.2010.02566.xopenalex-snapshot

Current knowledge on non‐native freshwater fish introductions

inferredcites →https://doi.org/10.1111/j.1365-2672.2012.05384.xopenalex-snapshot

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inferredcites →https://doi.org/10.1111/j.1466-8238.2011.00756.xopenalex-snapshot

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inferredcites →https://doi.org/10.1111/j.1467-2979.2010.00390.xopenalex-snapshot

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inferredcites →https://doi.org/10.1111/j.1471-8286.2007.01678.xopenalex-snapshot

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Meeting the challenges of urban river habitat restoration: developing a methodology for the River Thames through central London

inferredcites →https://doi.org/10.1111/j.1600-0587.2013.00695.xopenalex-snapshot

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inferredcites →https://doi.org/10.1111/j.2041-210x.2012.00224.xopenalex-snapshot

betapart: an R package for the study of beta diversity

inferredcites →https://doi.org/10.1111/jfb.14053openalex-snapshot

Environmental DNA metabarcoding as an effective and rapid tool for fish monitoring in canals

inferredcites →https://doi.org/10.1111/jfb.14176openalex-snapshot

The future of fish‐based ecological assessment of European rivers: from traditional EU Water Framework Directive compliant methods to eDNA metabarcoding‐based approaches

inferredcites →https://doi.org/10.1111/jfb.14190openalex-snapshot

Seasonal dynamics of riverine fish communities using eDNA

inferredcites →https://doi.org/10.1111/mec.13660openalex-snapshot

Environmental DNA metabarcoding of lake fish communities reflects long‐term data from established survey methods

inferredcites →https://doi.org/10.1111/mec.14920openalex-snapshot

How quantitative is metabarcoding: A meta‐analytical approach

inferredcites →https://doi.org/10.1111/mec.15623openalex-snapshot

Thermal stratification and fish thermal preference explain vertical eDNA distributions in lakes

inferredcites →https://doi.org/10.1126/sciadv.aap9661openalex-snapshot

Environmental DNA illuminates the dark diversity of sharks

inferredcites →https://doi.org/10.1139/cjfas-2016-0306openalex-snapshot

Fish community assessment with eDNA metabarcoding: effects of sampling design and bioinformatic filtering

inferredcites →https://doi.org/10.1186/1756-0500-5-337openalex-snapshot

AdapterRemoval: easy cleaning of next-generation sequencing reads

inferredcites →https://doi.org/10.1371/journal.pone.0002490openalex-snapshot

Identifying Canadian Freshwater Fishes through DNA Barcodes

inferredcites →https://doi.org/10.1371/journal.pone.0007866openalex-snapshot

The Real maccoyii: Identifying Tuna Sushi with DNA Barcodes – Contrasting Characteristic Attributes and Genetic Distances

inferredcites →https://doi.org/10.1371/journal.pone.0028381openalex-snapshot

Barcoding and Border Biosecurity: Identifying Cyprinid Fishes in the Aquarium Trade

inferredcites →https://doi.org/10.1371/journal.pone.0086175openalex-snapshot

Using Environmental DNA to Census Marine Fishes in a Large Mesocosm

inferredcites →https://doi.org/10.1371/journal.pone.0088786openalex-snapshot

Transport Distance of Invertebrate Environmental DNA in a Natural River

inferredcites →https://doi.org/10.1371/journal.pone.0175186openalex-snapshot

Aquatic environmental DNA detects seasonal fish abundance and habitat preference in an urban estuary

inferredcites →https://doi.org/10.1371/journal.pone.0179282openalex-snapshot

Clearing muddied waters: Capture of environmental DNA from turbid waters

inferredcites →https://doi.org/10.1371/journal.pone.0190924openalex-snapshot

Morphologically indistinguishable hybrid Carassius female with 156 chromosomes: A threat for the threatened crucian carp, C. carassius, L

inferredcites →https://doi.org/10.1371/journal.pone.0210357openalex-snapshot

Environmental DNA metabarcoding for fish community analysis in backwater lakes: A comparison of capture methods

inferredcites →https://doi.org/10.1371/journal.pone.0215505openalex-snapshot

Using eDNA to biomonitor the fish community in a tropical oligotrophic lake

inferredcites →https://doi.org/10.1371/journal.pone.0231127openalex-snapshot

Evaluation of fish biodiversity in estuaries using environmental DNA metabarcoding

inferredcites →https://doi.org/10.1371/journal.pone.0233522openalex-snapshot

Optimizing an eDNA protocol for estuarine environments: Balancing sensitivity, cost and time

inferredcites →https://doi.org/10.1899/08-171.1openalex-snapshot

Freshwater biodiversity conservation: recent progress and future challenges

inferredcites →https://doi.org/10.3354/meps12883openalex-snapshot

Debunking paradigms in estuarine fish species richness

inferredcites →https://doi.org/10.3389/fmars.2019.00515openalex-snapshot

Seasonal Fish Assemblage Structure Using Environmental DNA in the Yangtze Estuary and Its Adjacent Waters

inferredcites →https://doi.org/10.3390/genes11030296openalex-snapshot

Standards for Methods Utilizing Environmental DNA for Detection of Fish Species

inferredcites →https://doi.org/10.3897/biss.3.37986openalex-snapshot

mBRAVE: The Multiplex Barcode Research And Visualization Environment

inferredcites →https://doi.org/10.3897/mbmg.2.24262openalex-snapshot

Estimating fish alpha- and beta-diversity along a small stream with environmental DNA metabarcoding

inferredcites →https://doi.org/10.3897/mbmg.4.56959openalex-snapshot

Read counts from environmental DNA (eDNA) metabarcoding reflect fish abundance and biomass in drained ponds

inferredcites →https://doi.org/10.7717/peerj.1891openalex-snapshot

Sushi barcoding in the UK: another kettle of fish

inferredcites →https://doi.org/10.7717/peerj.3006openalex-snapshot

Random sampling causes the low reproducibility of rare eukaryotic OTUs in Illumina COI metabarcoding

inferredcites →https://doi.org/10.7717/peerj.4521openalex-snapshot

The effect of tides on nearshore environmental DNA

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3897/mbmg.8.128646zenodo-depositor-declared

Benchmarking the discrimination power of commonly used markers and amplicons in marine fish (e)DNA (meta)barcoding

inferred← citeshttps://doi.org/10.1002/2688-8319.70209openalex-snapshot

Detection and succession properties of forested vernal pools with eDNA metabarcoding

inferred← citeshttps://doi.org/10.1002/aff2.70201openalex-snapshot

Multi‐Seasonal eDNA Metabarcoding Highlights a Resurgence in Fish Diversity Across a Severely Impacted Estuarine Ecosystem

inferred← citeshttps://doi.org/10.1002/aqc.70214openalex-snapshot

Detection of Diadromous Fish Using Environmental DNA: Prospects for Its Use in Conservation of Endangered Species Occurring in Portugal

inferred← citeshttps://doi.org/10.1002/ece3.70626openalex-snapshot

Investigation on the Distribution of Bangana Tungting in Yuanshui Unique Fish Species National Aquatic Germplasm Resources Reserve Using Environmental DNA Technology

inferred← citeshttps://doi.org/10.1002/ece3.70627openalex-snapshot

Comparison Between Environmental DNA Metabarcoding and Traditional Survey Method to Identify Community Composition and Assembly of Stream Fish

inferred← citeshttps://doi.org/10.1002/ece3.73346openalex-snapshot

A Breath of Fresh Air: A Novel Passive Airborne eDNA Approach for Scalable Terrestrial Biodiversity Monitoring

inferred← citeshttps://doi.org/10.1002/ece3.73647openalex-snapshot

Passive Water Filtration Enhances the Detection of Endangered Fish Species in Rivers: Anguilla anguilla and Salmo salar Monitoring Using qPCR

inferred← citeshttps://doi.org/10.1002/edn3.385openalex-snapshot

Airborne eDNA documents a diverse and ecologically complex tropical bat and other mammal community

inferred← citeshttps://doi.org/10.1002/edn3.437openalex-snapshot

Assessing the degradation of environmental DNA and RNA based on genomic origin in a metabarcoding context

inferred← citeshttps://doi.org/10.1002/edn3.486openalex-snapshot

High frequency environmental DNA metabarcoding provides rapid and effective monitoring of fish community dynamics

inferred← citeshttps://doi.org/10.1002/edn3.494openalex-snapshot

Environmental DNA biomonitoring in biodiversity hotspots: A case study of fishes of the Okavango Delta

inferred← citeshttps://doi.org/10.1002/edn3.510openalex-snapshot

Putting eDNA to the test: A field comparison of eDNA metabarcoding to established protocols for assessing biodiversity in Missouri's Ozark Highland streams

inferred← citeshttps://doi.org/10.1002/edn3.520openalex-snapshot

Assessing fish diversity in abandoned mining ponds in Madre de Dios, Peru, using environmental DNA

inferred← citeshttps://doi.org/10.1002/edn3.560openalex-snapshot

A comparison of eDNA sampling methods in an estuarine environment on presence of longfin smelt (Spirinchus thaleichthys) and fish community composition

inferred← citeshttps://doi.org/10.1002/edn3.590openalex-snapshot

Enhancing metabarcoding of freshwater biotic communities: A new online tool for primer selection and exploring data from 14 primer pairs

inferred← citeshttps://doi.org/10.1002/edn3.70004openalex-snapshot

Assessing the Potential of Environmental DNA for Monitoring Nature‐Like Bypasses: Erroneous Surveillance Owing to DNA Flow‐Through

inferred← citeshttps://doi.org/10.1002/edn3.70019openalex-snapshot

Environmental DNA Metabarcoding Detects Predators at Higher Rates Than Electrofishing

inferred← citeshttps://doi.org/10.1002/edn3.70043openalex-snapshot

Temporal and Spatial eDNA Analysis of Fish Assemblages in Postindustrial, Urban Coastal Habitats

inferred← citeshttps://doi.org/10.1002/edn3.70051openalex-snapshot

Experimental Evidence of Rapidly Decaying Environmental DNA Highlights Infection Risk from Two Major Amphibian Pathogens

inferred← citeshttps://doi.org/10.1002/edn3.70060openalex-snapshot

Seasonal Changes in Fish eDNA Signal Vary Between Contrasting River Types

inferred← citeshttps://doi.org/10.1002/edn3.70065openalex-snapshot

Temporal and Spatial Dynamics of the Lotic Fish Communities: A Comparison of Coffee Filter‐Based Passive e DNA Collection Versus Active e DNA Filtering

inferred← citeshttps://doi.org/10.1002/edn3.70095openalex-snapshot

eDNA Replicates, Polymerase and Amplicon Size Impact Inference of Richness Across Habitats

inferred← citeshttps://doi.org/10.1002/edn3.70113openalex-snapshot

Quantifying the Temporal Dynamics of Marine Biodiversity Under Anthropogenic Impacts Using eDNA Metabarcoding

inferred← citeshttps://doi.org/10.1002/edn3.70147openalex-snapshot

Persisting at the Edge of Ecological Collapse: The Impact of Urbanization on Fish and Amphibian Communities From Lake Xochimilco

inferred← citeshttps://doi.org/10.1002/edn3.70149openalex-snapshot

Inferring Plant Community Phenology via Bee‐Collected Pollen

inferred← citeshttps://doi.org/10.1002/edn3.70206openalex-snapshot

Performance of eDNA Filtration Methods for Monitoring Fish Diversity in a Hyper‐Tidal Estuary

inferred← citeshttps://doi.org/10.1002/edn3.70223openalex-snapshot

Congruence of Fish Community Diversity and Composition Estimates Using Water and Sediment (Benthic Surface and Trapped Suspended Solids) Based Environmental DNA in a Recently Restored Creek

inferred← citeshttps://doi.org/10.1002/edn3.70282openalex-snapshot

Habitat Preferences and Short‐Term Dynamics of Alien Fishes Revealed by Environmental DNA in River Floodplains

inferred← citeshttps://doi.org/10.1002/edn3.70286openalex-snapshot

Comparing Aquatic Environmental DNA Collection Methods Across a Diel Cycle in a Lotic System

inferred← citeshttps://doi.org/10.1002/edn3.70335openalex-snapshot

Airborne Environmental DNA for Moth Monitoring: Effectiveness, Challenges, and Complementarity With Traditional Methods

inferred← citeshttps://doi.org/10.1002/ps.8789openalex-snapshot

Monitoring invertebrate pests on cowpea crops across China using eDNA metabarcoding

inferred← citeshttps://doi.org/10.1007/s00027-026-01373-5openalex-snapshot

Spatiotemporal patterns of fish community composition and structure in a subtropical reservoir: comparison of eDNA metabarcoding and gillnetting

inferred← citeshttps://doi.org/10.1007/s10661-025-14504-6openalex-snapshot

Comparative performance of eDNA and conventional capture-based monitoring approaches to detect riverine fish assemblages

inferred← citeshttps://doi.org/10.1007/s11160-026-10040-9openalex-snapshot

Fish diversity assessment through environmental DNA metabarcoding: a synthesis review of mock community studies

inferred← citeshttps://doi.org/10.1007/s11356-025-36202-zopenalex-snapshot

Environmental DNA (eDNA): an eco-friendly approach for conservation of Indian freshwater diversity—a review

inferred← citeshttps://doi.org/10.1007/s41208-025-01001-3openalex-snapshot

eDNA Metabarcoding: A Novel Approach for Identifying Marine Animal Organism in Mandalika’s Coastal

inferred← citeshttps://doi.org/10.1016/j.cub.2021.11.064openalex-snapshot

Measuring biodiversity from DNA in the air

inferred← citeshttps://doi.org/10.1016/j.ecolind.2022.108785openalex-snapshot

Cage transplant experiment shows weak transport effect on relative abundance of fish community composition as revealed by eDNA metabarcoding

inferred← citeshttps://doi.org/10.1016/j.ecolind.2023.111222openalex-snapshot

Assessing riverine fish community diversity and stability by eDNA metabarcoding

inferred← citeshttps://doi.org/10.1016/j.ecolind.2024.112215openalex-snapshot

Environmental DNA reveals ecologically relevant spatial and temporal variation in fish assemblages between estuaries and seasons

inferred← citeshttps://doi.org/10.1016/j.ecolind.2024.112538openalex-snapshot

Comparing diversity and structure of freshwater fish assemblages using environmental DNA and gillnetting methods: A case study of a large deep reservoir in East China

inferred← citeshttps://doi.org/10.1016/j.ecolind.2025.113441openalex-snapshot

A systematic review on environmental DNA (eDNA) Science: An eco-friendly survey method for conservation and restoration of fragile ecosystems

inferred← citeshttps://doi.org/10.1016/j.ecolind.2025.113459openalex-snapshot

Application of eDNA metabarcoding to assess spatial distribution and habitat use by freshwater fish in a peri-alpine lake

inferred← citeshttps://doi.org/10.1016/j.ecss.2023.108522openalex-snapshot

Environmental DNA metabarcoding for fish diversity assessment in a macrotidal estuary: A comparison with established fish survey methods

inferred← citeshttps://doi.org/10.1016/j.ecss.2023.108553openalex-snapshot

Strong water stratification provides a refuge for rainbow smelt larvae Osmerus mordax in a sub-arctic estuary (Lake Melville, Labrador)

inferred← citeshttps://doi.org/10.1016/j.ecss.2024.108824openalex-snapshot

Environmental DNA enhances comprehension of the spatial and temporal dynamics of fish diversity in a coastal lagoon

inferred← citeshttps://doi.org/10.1016/j.envadv.2024.100534openalex-snapshot

Exploring fish communities in the mud volcano polluted river using environmental DNA metabarcoding

inferred← citeshttps://doi.org/10.1016/j.envres.2023.115236openalex-snapshot

Multi-group biodiversity distributions and drivers of metacommunity organization along a glacial–fluvial–limnic pathway on the Tibetan plateau

inferred← citeshttps://doi.org/10.1016/j.envres.2023.115857openalex-snapshot

Using environmental DNA metabarcoding to monitor fish communities in small rivers and large brooks: Insights on the spatial scale of information

inferred← citeshttps://doi.org/10.1016/j.envres.2025.121238openalex-snapshot

Freshwater fish community assessment using eDNA metabarcoding vs. capture-based methods: Differences in efficiency and resolution coupled to habitat and ecology

inferred← citeshttps://doi.org/10.1016/j.gecco.2025.e03963openalex-snapshot

Fish diversity and continuous sampling strategy in the lower Hanjiang River: Comparing the eDNA with the traditional methods

inferred← citeshttps://doi.org/10.1016/j.indic.2026.101187openalex-snapshot

Unraveling fish diversity and assembly patterns by eDNA metabarcoding in a highly dynamic freshwater ecosystem with diverse rare and endemic fish species

inferred← citeshttps://doi.org/10.1016/j.isci.2024.109476openalex-snapshot

Successive accumulation of biotic assemblages at a fine spatial scale along glacier-fed waters

inferred← citeshttps://doi.org/10.1016/j.jembe.2025.152159openalex-snapshot

A multi-method assessment of elasmobranch diversity and abundance in the southern Red Sea

inferred← citeshttps://doi.org/10.1016/j.jglr.2024.102317openalex-snapshot

Nearshore fish diversity changes with sampling method and human disturbance: Comparing eDNA metabarcoding and seine netting along the Upper St. Lawrence River

inferred← citeshttps://doi.org/10.1016/j.marenvres.2026.108259openalex-snapshot

Unveiling Ross Sea eukaryotic diversity through environmental DNA metabarcoding

inferred← citeshttps://doi.org/10.1016/j.rsma.2026.105411openalex-snapshot

SAS eDNA complements traditional sampling in detecting fish diversity along river-estuarine-coastal continuum

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2025.179690openalex-snapshot

Assessing the effects of urban effluent pollution on freshwater biodiversity and community networks using eDNA metabarcoding

inferred← citeshttps://doi.org/10.1021/acs.est.5c06266openalex-snapshot

Beyond Species Richness: A Statistically Rigorous Comparison of eDNA and Conventional Fish Sampling Methods

inferred← citeshttps://doi.org/10.1038/s41598-022-15488-wopenalex-snapshot

eDNA metabarcoding as a promising conservation tool to monitor fish diversity in Beijing water systems compared with ground cages

inferred← citeshttps://doi.org/10.1038/s41598-022-19954-3openalex-snapshot

Assessing a megadiverse but poorly known community of fishes in a tropical mangrove estuary through environmental DNA (eDNA) metabarcoding

inferred← citeshttps://doi.org/10.1038/s41598-023-38218-2openalex-snapshot

Sustainable fisheries management through reliable restocking and stock enhancement evaluation with environmental DNA

inferred← citeshttps://doi.org/10.1080/02705060.2024.2382454openalex-snapshot

Environmental DNA metabarcoding for whole community inventories of vertebrates in rivers of the midwestern United States

inferred← citeshttps://doi.org/10.1080/02705060.2025.2541689openalex-snapshot

Evaluating eDNA metabarcoding for fish biodiversity assessment in Nigerian aquatic ecosystems: potential, limitations, and comparisons with traditional methods

inferred← citeshttps://doi.org/10.1080/15627020.2023.2274334openalex-snapshot

The status of COI and 12S rRNA DNA barcode reference libraries for freshwater fish in South Africa: Implications for future eDNA projects

inferred← citeshttps://doi.org/10.1093/icesjms/fsag035openalex-snapshot

Significance of rare species in evaluating marine conservation effects on fish community using hill numbers

inferred← citeshttps://doi.org/10.1111/1365-2656.70082openalex-snapshot

Network dynamics revealed from eDNA highlight seasonal variation in urban mammal communities

inferred← citeshttps://doi.org/10.1111/1749-4877.12916openalex-snapshot

Exploring riverine aquatic animal diversity and establishing aquatic ecological monitoring approaches tailored to the Qinling region via eDNA technology

inferred← citeshttps://doi.org/10.1111/1755-0998.13861openalex-snapshot

New deep learning‐based methods for visualizing ecosystem properties using environmental DNA metabarcoding data

inferred← citeshttps://doi.org/10.1111/1755-0998.13936openalex-snapshot

Environmental DNA metabarcoding of freshwater fish in Malaysian tropical rivers using short‐read nanopore sequencing as a potential biomonitoring tool

inferred← citeshttps://doi.org/10.1111/1755-0998.14028openalex-snapshot

Barcode 100K Specimens: In a Single Nanopore Run

inferred← citeshttps://doi.org/10.1111/1755-0998.70043openalex-snapshot

BOLDistilled : Automated Construction of Comprehensive but Compact DNA Barcode Reference Libraries

inferred← citeshttps://doi.org/10.1111/aec.70094openalex-snapshot

Tracing Waterbirds in Water: A Pilot Study on the Utility of eDNA Monitoring for Inland Australian Waterbirds

inferred← citeshttps://doi.org/10.1111/fwb.70308openalex-snapshot

Enabling Quantitative eDNA Monitoring in Lotic Ecosystems by Incorporating Hydrological Characteristics and Allometric Scaling

inferred← citeshttps://doi.org/10.1111/jfb.70172openalex-snapshot

Quantitative insights into the spatio‐temporal variation of Atlantic salmon ( Salmo salar ) biomass in a river catchment using eDNA metabarcoding

inferred← citeshttps://doi.org/10.1111/mec.17355openalex-snapshot

Environmental DNA : The next chapter

inferred← citeshttps://doi.org/10.1139/cjfas-2023-0053openalex-snapshot

Contrasting strengths of eDNA and electrofishing compared to historic records for assessing fish community diversity and composition

inferred← citeshttps://doi.org/10.1139/cjfas-2023-0227openalex-snapshot

Monitoring estuarine fish communities: environmental DNA (eDNA) metabarcoding as a complement to beach seining

inferred← citeshttps://doi.org/10.1139/cjfas-2024-0143openalex-snapshot

The riverscape on a chip: high-throughput qPCR enables basin-wide fishery assessments

inferred← citeshttps://doi.org/10.1139/cjfas-2024-0323openalex-snapshot

eDNA metabarcoding provides biodiversity estimates comparable to conventional sampling methods

inferred← citeshttps://doi.org/10.1139/cjz-2021-0018openalex-snapshot

Molecular diet analysis of the marine fish-eating bat (Myotis vivesi) and potential mercury exposure

inferred← citeshttps://doi.org/10.13057/biodiv/d240562openalex-snapshot

Environmental DNA (eDNA) metabarcoding and fish visual census reveals the first record of Doboatherina magnidentata in the Philippines

inferred← citeshttps://doi.org/10.1371/journal.pone.0283088openalex-snapshot

Environmental DNA metabarcoding of water samples as a tool for monitoring Iberian freshwater fish composition

inferred← citeshttps://doi.org/10.15517/4z83mm52openalex-snapshot

Combining environmental DNA metabarcoding and specimen collections to describe fish biodiversity in the Tukakas Bay, Colombian Caribbean

inferred← citeshttps://doi.org/10.2139/ssrn.6537184openalex-snapshot

Side by side in space and time: Comparing standardized lake sampling methods and eDNA metabarcoding for assessing fish biodiversity

inferred← citeshttps://doi.org/10.29244/jitkt.v16i2.57410openalex-snapshot

MORPHOLOGICAL AND MOLECULAR COMPARISON OF AREOLATE GROUPER (Epinephelus areolatus) FROM SAUDI ARABIA AND INDONESIA

inferred← citeshttps://doi.org/10.33256/hb161.511openalex-snapshot

02. Great crested newt Triturus cristatus, smooth newt Lissotriton vulgaris, and other amphibians in an acidified area of southern Norway surveyed using eDNA and other methods

inferred← citeshttps://doi.org/10.3389/fevo.2022.913279openalex-snapshot

Similarities and Differences in Fish Community Composition Accessed by Electrofishing, Gill Netting, Seining, Trawling, and Water eDNA Metabarcoding in Temperate Reservoirs

inferred← citeshttps://doi.org/10.3390/d15030322openalex-snapshot

Investigating the Potential Utility of Environmental DNA to Provide a Relative Abundance Index for the Depleted Teleost, Mulloway, Argyrosomus japonicus

inferred← citeshttps://doi.org/10.3390/d16080495openalex-snapshot

Biodiversity Assessment of a Mississippi River Backwater Complex Using eDNA Metabarcoding

inferred← citeshttps://doi.org/10.3390/fishes11040219openalex-snapshot

A Species-Specific Assay for Salmo cf. trutta and Its Application in eDNA-Based Spawning Activity Monitoring

inferred← citeshttps://doi.org/10.3390/fishes8110550openalex-snapshot

Metabarcoding by Combining Environmental DNA with Environmental RNA to Monitor Fish Species in the Han River, Korea

inferred← citeshttps://doi.org/10.3390/fishes9110422openalex-snapshot

Evaluation of Fish Biodiversity in Estuaries Through Environmental DNA Metabarcoding: A Comprehensive Review

inferred← citeshttps://doi.org/10.3390/hydrobiology4010003openalex-snapshot

Evaluation of Sampling Precision for Native and Nonnative Fish in the Gila River Basin, New Mexico

inferred← citeshttps://doi.org/10.5204/thesis.eprints.237734openalex-snapshot

Detecting the invasive jaguar cichlid in the pioneer river using a non-invasive environmental DNA approach: Implications for management

inferred← citeshttps://doi.org/10.7717/peerj.14810openalex-snapshot

Using eDNA sampling for species-specific fish detection in tropical oceanic samples: limitations and recommendations for future use

inferred← citeshttps://doi.org/10.7717/peerj.18016openalex-snapshot

Is it worth the extra mile? Comparing environmental DNA and RNA metabarcoding for vertebrate and invertebrate biodiversity surveys in a lowland stream

inferred← citeshttps://doi.org/10.7717/peerj.21399openalex-snapshot

eDNA reveals extraordinary fish diversity in the Urauchi River, Iriomote Island, Japan, a UNESCO World Heritage Site

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