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Machine learning approaches for prediction of linear B‐cell epitopes on proteins
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/cfg.319openalex-snapshot
Analysis of known bacterial protein vaccine antigens reveals biased physical properties and amino acid composition
inferredcites →https://doi.org/10.1002/jmr.602openalex-snapshot
BEPITOPE: predicting the location of continuous epitopes and patterns in proteins
inferredcites →https://doi.org/10.1006/biol.2001.0308openalex-snapshot
Antigenicity and Immunogenicity of Synthetic Peptides
inferredcites →https://doi.org/10.1007/bf01195768openalex-snapshot
Prediction of chain flexibility in proteins
inferredcites →https://doi.org/10.1007/s002510050595openalex-snapshot
SYFPEITHI: database for MHC ligands and peptide motifs
inferredcites →https://doi.org/10.1016/0014-5793(85)80374-4openalex-snapshot
Prediction of sequential antigenic regions in proteins
inferredcites →https://doi.org/10.1016/0014-5793(90)80535-qopenalex-snapshot
A semi‐empirical method for prediction of antigenic determinants on protein antigens
inferredcites →https://doi.org/10.1016/0165-2478(93)90072-aopenalex-snapshot
Correlation between the location of antigenic sites and the prediction of turns in proteins
inferredcites →https://doi.org/10.1016/0968-0004(86)90230-6openalex-snapshot
Which structural features determine protein antigenicity?
inferredcites →https://doi.org/10.1016/j.vaccine.2004.02.005openalex-snapshot
Prediction of CTL epitopes using QM, SVM and ANN techniques
inferredcites →https://doi.org/10.1016/s0076-6879(96)66035-2openalex-snapshot
[33] Analysis of compositionally biased regions in sequence databases
inferredcites →https://doi.org/10.1016/s0264-410x(99)00329-1openalex-snapshot
Predictive estimation of protein linear epitopes by using the program PEOPLE
inferredcites →https://doi.org/10.1021/bi9803933openalex-snapshot
Interaction of the Major Epitope Region of HIV Protein gp41 with Membrane Model Systems. A Fluorescence Spectroscopy Study
inferredcites →https://doi.org/10.1038/13590openalex-snapshot
Defining epitopes: It's not as easy as it seems
inferredcites →https://doi.org/10.1038/311123a0openalex-snapshot
Correlation between segmental mobility and the location of antigenic determinants in proteins
inferredcites →https://doi.org/10.1073/pnas.092569199openalex-snapshot
Identification of in vivo expressed vaccine candidate antigens from Staphylococcus aureus
inferredcites →https://doi.org/10.1073/pnas.78.6.3824openalex-snapshot
Prediction of protein antigenic determinants from amino acid sequences.
inferredcites →https://doi.org/10.1073/pnas.89.22.10915openalex-snapshot
Amino acid substitution matrices from protein blocks.
inferredcites →https://doi.org/10.1093/nar/28.1.222openalex-snapshot
FIMM, a database of functional molecular immunology
inferredcites →https://doi.org/10.1110/ps.041059505openalex-snapshot
Benchmarking B cell epitope prediction: Underperformance of existing methods
inferredcites →https://doi.org/10.1128/jvi.61.2.570-578.1987openalex-snapshot
Computer-assisted analysis of envelope protein sequences of seven human immunodeficiency virus isolates: prediction of antigenic epitopes in conserved and variable regions
inferredcites →https://doi.org/10.1186/1471-2164-6-79openalex-snapshot
Bcipep: A database of B-cell epitopes
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1002/jmr.768openalex-snapshot
Immunoinformatics may lead to a reappraisal of the nature of B cell epitopes and of the feasibility of synthetic peptide vaccines
inferred← citeshttps://doi.org/10.1002/jmr.770openalex-snapshot
Selection and combination of machine learning classifiers for prediction of linear B‐cell epitopes on proteins
inferred← citeshttps://doi.org/10.1002/jmr.815openalex-snapshot
Towards a consensus on datasets and evaluation metrics for developing B‐cell epitope prediction tools
inferred← citeshttps://doi.org/10.1002/jmr.819openalex-snapshot
Identification of discontinuous antigenic determinants on proteins based on shape complementarities
inferred← citeshttps://doi.org/10.1002/jmr.893openalex-snapshot
Predicting linear B‐cell epitopes using string kernels
inferred← citeshttps://doi.org/10.1002/jmr.910openalex-snapshot
Estimation and extraction of B‐cell linear epitopes predicted by mathematical morphology approaches
inferred← citeshttps://doi.org/10.1002/pro.245openalex-snapshot
Prediction of antibody response using recombinant human protein fragments as antigen
inferred← citeshttps://doi.org/10.1002/pro.4785openalex-snapshot
Multi‐perspectives and challenges in identifying B‐cell epitopes
inferred← citeshttps://doi.org/10.1007/978-0-387-75841-1_4openalex-snapshot
Models for Prediction of Immunogenicity
inferred← citeshttps://doi.org/10.1007/978-1-4939-1115-8_12openalex-snapshot
Machine Learning-Based Methods for Prediction of Linear B-Cell Epitopes
inferred← citeshttps://doi.org/10.1007/978-1-4939-1115-8_14openalex-snapshot
Hybrid Methods for B-Cell Epitope Prediction
inferred← citeshttps://doi.org/10.1007/978-1-4939-1115-8_7openalex-snapshot
Databases for B-Cell Epitopes
inferred← citeshttps://doi.org/10.1007/978-1-4939-2285-7_13openalex-snapshot
Computational Peptide Vaccinology
inferred← citeshttps://doi.org/10.1007/978-1-4939-2999-3_1openalex-snapshot
Peptide Antibodies: Past, Present, and Future
inferred← citeshttps://doi.org/10.1007/978-1-4939-2999-3_29openalex-snapshot
Enterovirus-Specific Anti-peptide Antibodies
inferred← citeshttps://doi.org/10.1007/978-1-4939-2999-3_4openalex-snapshot
Prediction of Antibody Epitopes
inferred← citeshttps://doi.org/10.1007/978-3-030-05147-1_3openalex-snapshot
Definition of Allergens: Inhalants, Food, and Insects Allergens
inferred← citeshttps://doi.org/10.1007/978-3-319-58726-4_3-1openalex-snapshot
Definition of Allergens: Inhalants, Food, and Insects Allergens
inferred← citeshttps://doi.org/10.1007/978-3-540-72031-7_39openalex-snapshot
A Database for Prediction of Unique Peptide Motifs as Linear Epitopes
inferred← citeshttps://doi.org/10.1007/s00726-006-0485-9openalex-snapshot
Prediction of linear B-cell epitopes using amino acid pair antigenicity scale
inferred← citeshttps://doi.org/10.1016/b978-0-443-13395-4.00001-0openalex-snapshot
Reverse vaccinology 2.0: computational resources for B-cell epitope prediction
inferred← citeshttps://doi.org/10.1016/j.biochi.2014.03.016openalex-snapshot
Using random forest to classify linear B-cell epitopes based on amino acid properties and molecular features
inferred← citeshttps://doi.org/10.1016/j.clim.2019.02.008openalex-snapshot
Identification and mutational analysis of continuous, immunodominant epitopes of the major oyster allergen Crag 1
inferred← citeshttps://doi.org/10.1016/j.ddtec.2009.04.001openalex-snapshot
B-cell epitope engineering: A matter of recognizing protein features and motives
inferred← citeshttps://doi.org/10.1016/j.fct.2011.07.043openalex-snapshot
Mapping IgE binding epitopes of major shrimp (Penaeus monodon) allergen with immunoinformatics tools
inferred← citeshttps://doi.org/10.1016/j.genrep.2019.100385openalex-snapshot
Epitope-based immunoinformatics study of a novel PilQ380–706-PilA fusion protein from Pseudomonas aeruginosa
inferred← citeshttps://doi.org/10.1016/j.jbi.2014.11.003openalex-snapshot
An overview of bioinformatics tools for epitope prediction: Implications on vaccine development
inferred← citeshttps://doi.org/10.1016/j.jtbi.2016.01.021openalex-snapshot
A novel conformational B-cell epitope prediction method based on mimotope and patch analysis
inferred← citeshttps://doi.org/10.1016/j.toxicon.2017.10.022openalex-snapshot
Identification of B cell recognized linear epitopes in a snake venom serine proteinase from the central American bushmaster Lachesis stenophrys
inferred← citeshttps://doi.org/10.1016/j.vaccine.2025.128051openalex-snapshot
Machine learning (ML) and deep learning (DL) in vaccine target selection, design, development and characterization
inferred← citeshttps://doi.org/10.1016/j.ymeth.2013.07.024openalex-snapshot
Structure of allergens and structure based epitope predictions
inferred← citeshttps://doi.org/10.1021/acs.jafc.9b04294openalex-snapshot
Cloning, Expression, and Epitope Identification of Myosin Light Chain 1: An Allergen in Mud Crab
inferred← citeshttps://doi.org/10.1021/acs.jproteome.0c00553openalex-snapshot
Computational Immune Proteomics Approach to Target COVID-19
inferred← citeshttps://doi.org/10.1021/acsomega.4c07147openalex-snapshot
PAPreC: A Pipeline for Antigenicity Prediction Comparison Methods across Bacteria
inferred← citeshttps://doi.org/10.1051/parasite/2023011openalex-snapshot
A systematic review of peptide-based serological tests for the diagnosis of leishmaniasis
inferred← citeshttps://doi.org/10.1080/19420862.2021.2008790openalex-snapshot
Progress and challenges for the machine learning-based design of fit-for-purpose monoclonal antibodies
inferred← citeshttps://doi.org/10.1080/87559120802089258openalex-snapshot
Celiac Disease—Background, Molecular, Bioinformatics and Analytical Aspects
inferred← citeshttps://doi.org/10.1093/bib/bbac356openalex-snapshot
A comparative analysis of amino acid encoding schemes for the prediction of flexible length linear B-cell epitopes
inferred← citeshttps://doi.org/10.1093/bioinformatics/btm471openalex-snapshot
Modeling the adaptive immune system: predictions and simulations
inferred← citeshttps://doi.org/10.1093/bioinformatics/btq551openalex-snapshot
High-throughput prediction of protein antigenicity using protein microarray data
inferred← citeshttps://doi.org/10.1093/protein/gzn075openalex-snapshot
COBEpro: a novel system for predicting continuous B-cell epitopes
inferred← citeshttps://doi.org/10.1093/protein/gzq014openalex-snapshot
Use of amino acid composition to predict epitope residues of individual antibodies
inferred← citeshttps://doi.org/10.1109/bibm.2008.80openalex-snapshot
Predicting Protective Linear B-Cell Epitopes Using Evolutionary Information
inferred← citeshttps://doi.org/10.1109/bibmw.2009.5332121openalex-snapshot
Sequence-based B-cell epitope prediction by using associations in antibody-antigen structural complexes
inferred← citeshttps://doi.org/10.1109/bmei.2010.5640578openalex-snapshot
Predicting flexible length linear B-cell epitopes using pairwise sequence similarity
inferred← citeshttps://doi.org/10.1109/ccdc.2011.5968954openalex-snapshot
An introduction to main B-cell epitope prediction methods and software based on phase display library
inferred← citeshttps://doi.org/10.1109/icbbe.2008.29openalex-snapshot
Differential Performance Between Structural and Functional B-Cell Epitopic Residue Prediction
inferred← citeshttps://doi.org/10.1109/icbbe.2009.5163213openalex-snapshot
Prediction of Linear B-Cell Epitopes Using AAT Scale
inferred← citeshttps://doi.org/10.1109/icbcb.2019.8854655openalex-snapshot
Prediction of Linear B-cell Epitopes Based on PCA and RNN Network
inferred← citeshttps://doi.org/10.1109/icccnt.2013.6726820openalex-snapshot
Computational prediction of continuous B-cell epitopes using random forest classifier
inferred← citeshttps://doi.org/10.1109/itime.2012.6291437openalex-snapshot
Identification of epitopes in Echinococcosis multilocularis 14-3-3 antigen: A bioinformatics approach
inferred← citeshttps://doi.org/10.1109/tcbb.2011.49openalex-snapshot
Antibody-Specified B-Cell Epitope Prediction in Line with the Principle of Context-Awareness
inferred← citeshttps://doi.org/10.1111/pim.12111openalex-snapshot
B‐cell epitopes of antigenic proteins in Leishmania infantum: an in silico analysis
inferred← citeshttps://doi.org/10.1134/s0026893309010208openalex-snapshot
Prediction of linear B-cell epitopes
inferred← citeshttps://doi.org/10.1142/9789812778789_0015openalex-snapshot
Prediction and Identification of B Cell Epitopes Using Protein Sequence and Structure Information
inferred← citeshttps://doi.org/10.1145/1854776.1854889openalex-snapshot
B-cell epitope prediction for peptide-based vaccine design
inferred← citeshttps://doi.org/10.1145/3444884.3444913openalex-snapshot
A Novel Linear B-cell Epitope Prediction Method based on Position Entropy of Amino Acids
inferred← citeshttps://doi.org/10.1145/3774976.3774994openalex-snapshot
ConfPred: ML-Based Conformational B-cell Epitope Prediction Using Novel Features
inferred← citeshttps://doi.org/10.1155/2013/943636openalex-snapshot
Bioinformatics Resources and Tools for Conformational B-Cell Epitope Prediction
inferred← citeshttps://doi.org/10.11606/d.17.2010.tde-26052011-113627openalex-snapshot
Predição In Silico de Epítopos de Microrganismos com Identidade a Autoantígenos Humanos
inferred← citeshttps://doi.org/10.1186/1471-2105-12-199openalex-snapshot
MimoPro: a more efficient Web-based tool for epitope prediction using phage display libraries
inferred← citeshttps://doi.org/10.1186/1471-2105-12-251openalex-snapshot
Determinants of antigenicity and specificity in immune response for protein sequences
inferred← citeshttps://doi.org/10.1186/1471-2105-12-341openalex-snapshot
Prediction of conformational B-cell epitopes from 3D structures by random forests with a distance-based feature
inferred← citeshttps://doi.org/10.1186/1471-2105-13-s17-s20openalex-snapshot
B-cell epitope prediction through a graph model
inferred← citeshttps://doi.org/10.1186/1471-2105-14-315openalex-snapshot
A novel strategy for classifying the output from an in silicovaccine discovery pipeline for eukaryotic pathogens using machine learning algorithms
inferred← citeshttps://doi.org/10.1186/1471-2105-9-538openalex-snapshot
Pep-3D-Search: a method for B-cell epitope prediction based on mimotope analysis
inferred← citeshttps://doi.org/10.1186/1471-2105-9-71openalex-snapshot
PEPOP: Computational design of immunogenic peptides
inferred← citeshttps://doi.org/10.1186/1471-2164-11-s4-s21openalex-snapshot
SVM-based prediction of linear B-cell epitopes using Bayes Feature Extraction
inferred← citeshttps://doi.org/10.1186/1472-6807-10-s1-s6openalex-snapshot
Mining for the antibody-antigen interacting associations that predict the B cell epitopes
inferred← citeshttps://doi.org/10.1186/1472-6807-7-64openalex-snapshot
Antibody-protein interactions: benchmark datasets and prediction tools evaluation
inferred← citeshttps://doi.org/10.1186/1745-6150-8-27openalex-snapshot
Identification of B-cell epitopes in an antigen for inducing specific class of antibodies
inferred← citeshttps://doi.org/10.1186/1745-6150-8-30openalex-snapshot
Designing of interferon-gamma inducing MHC class-II binders
inferred← citeshttps://doi.org/10.1186/1745-7580-4-1openalex-snapshot
Analysis and prediction of protective continuous B-cell epitopes on pathogen proteins
inferred← citeshttps://doi.org/10.1186/1745-7580-6-s2-s2openalex-snapshot
Recent advances in B-cell epitope prediction methods
inferred← citeshttps://doi.org/10.1186/1755-8794-8-s4-s3openalex-snapshot
Prediction of linear B-cell epitopes of hepatitis C virus for vaccine development
inferred← citeshttps://doi.org/10.1186/s12859-014-0414-yopenalex-snapshot
EPMLR: sequence-based linear B-cell epitope prediction method using multiple linear regression
inferred← citeshttps://doi.org/10.1371/annotation/57a9c527-109a-435f-a78d-1b7bce0e578bopenalex-snapshot
Correction: Prediction of Peptide Reactivity with Human IVIg through a Knowledge-Based Approach
inferred← citeshttps://doi.org/10.1371/annotation/58d3a7cb-d039-40ca-b960-bd60abfe0ae3openalex-snapshot
Correction: Identification of Amino Acid Propensities That Are Strong Determinants of Linear B-cell Epitope Using Neural Networks
inferred← citeshttps://doi.org/10.1371/journal.pone.0023616openalex-snapshot
Prediction of Peptide Reactivity with Human IVIg through a Knowledge-Based Approach
inferred← citeshttps://doi.org/10.1371/journal.pone.0030617openalex-snapshot
Identification of Amino Acid Propensities That Are Strong Determinants of Linear B-cell Epitope Using Neural Networks
inferred← citeshttps://doi.org/10.1371/journal.pone.0040104openalex-snapshot
BEST: Improved Prediction of B-Cell Epitopes from Antigen Sequences
inferred← citeshttps://doi.org/10.1371/journal.pone.0043575openalex-snapshot
Computational Prediction of Conformational B-Cell Epitopes from Antigen Primary Structures by Ensemble Learning
inferred← citeshttps://doi.org/10.1371/journal.pone.0078605openalex-snapshot
Epitope Predictions Indicate the Presence of Two Distinct Types of Epitope-Antibody-Reactivities Determined by Epitope Profiling of Intravenous Immunoglobulins
inferred← citeshttps://doi.org/10.1371/journal.pone.0080562openalex-snapshot
Computational Prediction of Broadly Neutralizing HIV-1 Antibody Epitopes from Neutralization Activity Data
inferred← citeshttps://doi.org/10.1371/journal.pone.0306254openalex-snapshot
Assessing the predictive ability of computational epitope prediction methods on Fel d 1 and other allergens
inferred← citeshttps://doi.org/10.1504/ijdmb.2012.049298openalex-snapshot
Predicting linear B-cell epitopes by using sequence-derived structural and physicochemical features
inferred← citeshttps://doi.org/10.1515/pac-2020-1107openalex-snapshot
Data curation to improve the pattern recognition performance of B-cell epitope prediction by support vector machine
inferred← citeshttps://doi.org/10.1517/17460441.2.1.19openalex-snapshot
Using databases and data mining in vaccinology
inferred← citeshttps://doi.org/10.18782/2320-7051.2586openalex-snapshot
Peptide Markers based Prediction of Antigen Sequence using Neural Network
inferred← citeshttps://doi.org/10.20431/2349-4859.0801003openalex-snapshot
Predictive Analysis of Linear B-Cell Epitopes in Immune Function using ML Algorithms
inferred← citeshttps://doi.org/10.20506/rst.26.1.1727openalex-snapshot
Genómica y desarollo de vacunas
inferred← citeshttps://doi.org/10.2174/0115701646244648231014153217openalex-snapshot
Developing Multi-epitope Antigen Construct from Immunodominant Proteins for Serological Diagnosis of Chlamydia trachomatis: An In Silico Approach
inferred← citeshttps://doi.org/10.2174/0929866511320060011openalex-snapshot
Evaluation and Comparison of the Ability of Online Available Prediction Programs to Predict True Linear B-cell Epitopes
inferred← citeshttps://doi.org/10.2478/s11756-020-00566-zopenalex-snapshot
Designing an HCV diagnostic kit for common genotypes of the virus in Iran based on conserved regions of core, NS3-protease, NS4A/B, and NS5A/B antigens: an in silico approach
inferred← citeshttps://doi.org/10.31274/etd-180810-677openalex-snapshot
Machine learning approaches for epitope prediction
inferred← citeshttps://doi.org/10.32657/10356/54752openalex-snapshot
Characterization and prediction of B-cell epitopes
inferred← citeshttps://doi.org/10.3390/ijms22063210openalex-snapshot
Linear B-Cell Epitope Prediction for In Silico Vaccine Design: A Performance Review of Methods Available via Command-Line Interface
inferred← citeshttps://doi.org/10.4172/1745-7580.1000044openalex-snapshot
B-cell epitope prediction for peptide-based vaccine design: towards a paradigm of biological outcomes for global health
inferred← citeshttps://doi.org/10.5120/10520-5498openalex-snapshot
Computational Methods in Linear B-cell Epitope Prediction
inferred← citeshttps://doi.org/10.5121/ijbb.2013.3205openalex-snapshot
Computational identification of Brassica napus pollen specific protein Bnm1 as an allergen
inferred← citeshttps://doi.org/10.51583/ijltemas.2025.140300024openalex-snapshot
Support Vector Machine Implementation in the Analysis of HIV Species Based on Amino Acid and Dipeptide Sequences
inferred← citeshttps://doi.org/10.5455/jabet.2019.d36openalex-snapshot
Analysis of maize profilin-4 isoform as an allergen
inferred← citeshttps://doi.org/10.5923/j.bioinformatics.20110101.02openalex-snapshot
On Predicting Conformational B-cell Epitopes: a Comparative Study and a New Model
inferred← citeshttps://doi.org/10.5923/j.bioinformatics.20120204.03openalex-snapshot
Prediction of Antigenic Epitope Patches on Protein Surface Using Antigen Structure Information and Support Vector Machine
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