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Structure and function of the symbiosis partners of the lung lichen ( Lobaria pulmonaria L. Hoffm.) analyzed by metaproteomics
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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A guide to the Proteomics Identifications Database proteomics data repository
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Environmental proteomics: Analysis of structure and function of microbial communities
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Microbial consortia of bacteria and fungi with focus on the lichen symbiosis
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Actinomycetes isolated from lichens: Evaluation of their diversity and detection of biosynthetic gene sequences
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Trouble with lichen: the re-evaluation and re-interpretation of thallus form and fruit body types in the molecular era
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The gene crtI mediates the conversion of phytoene into colored carotenoids in Rhodopseudomonas capsulata.
inferredcites →https://doi.org/10.1016/s0024-2829(05)80016-7openalex-snapshot
, the correct phycobiont of and the high degree of selectivity or specificity involved
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Dictyochloropsis Splendida (Chlorophyta), the Correct Phycobiont of Phlyctis Argena and the High Degree of Selectivity or Specificity Involved
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Dictyochloropsis Splendida (Chlorophyta), the Correct Phycobiont of Phlyctis Argena and the High Degree of Selectivity or Specificity Involved
inferredcites →https://doi.org/10.1038/35082053openalex-snapshot
Major fungal lineages are derived from lichen symbiotic ancestors
inferredcites →https://doi.org/10.1038/ismej.2008.44openalex-snapshot
The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity
inferredcites →https://doi.org/10.1038/ismej.2009.109openalex-snapshot
Global ecological patterns in uncultured Archaea
inferredcites →https://doi.org/10.1038/ismej.2009.63openalex-snapshot
Species-specific structural and functional diversity of bacterial communities in lichen symbioses
inferredcites →https://doi.org/10.1078/094471103322331539openalex-snapshot
Anti-inflammatory and antiulcerogenic effects of the aqueous extract of Lobaria pulmonaria (L.) Hoffm.
inferredcites →https://doi.org/10.1080/15572536.2006.11832636openalex-snapshot
New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes
inferredcites →https://doi.org/10.1093/oso/9780198577690.003.0005openalex-snapshot
The lichen thallus: a symbiotic phenotype of nutritionally specialized fungi and its response to gall producers
inferredcites →https://doi.org/10.1111/j.1365-2672.2006.03010.xopenalex-snapshot
Nitrogen-fixing chemo-organotrophic bacteria isolated from cyanobacteria-deprived lichens and their ability to solubilize phosphate and to release amino acids and phytohormones
inferredcites →https://doi.org/10.1111/j.1469-8137.2007.02096.xopenalex-snapshot
Changes in pools of depsidones and melanins, and their function, during growth and acclimation under contrasting natural light in the lichen Lobaria pulmonaria
inferredcites →https://doi.org/10.1111/j.1574-6941.2006.00133.xopenalex-snapshot
Molecular analysis of lichen-associated bacterial communities
inferredcites →https://doi.org/10.1111/j.1574-6941.2008.00546.xopenalex-snapshot
In situ analysis of the bacterial community associated with the reindeer lichen Cladonia arbuscula reveals predominance of Alphaproteobacteria
inferredcites →https://doi.org/10.1111/j.1758-2229.2010.00206.xopenalex-snapshot
Microbial metacommunities in the lichen–rock habitat
inferredcites →https://doi.org/10.1128/aem.02257-10openalex-snapshot
Bacterial Communities Associated with the Lichen Symbiosis
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Deforestation fosters bacterial diversity and the cyanobacterial community responsible for carbon fixation processes under semiarid climate: a metaproteomics study
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Proteome profiles of HDL particles of patients with chronic heart failure are associated with immune response and also include bacteria proteins
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Infant gut microbiota contributes to cognitive performance in mice
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Mitochondrial genomes from the lichenized fungi Peltigera membranacea and Peltigera malacea: Features and phylogeny
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Metaproteomics reveals the structural and functional diversity of Dermatocarpon miniatum (L.) W. Mann. Microbiota
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Challenges and perspectives of metaproteomic data analysis
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The ecological and physiological responses of the microbial community from a semiarid soil to hydrocarbon contamination and its bioremediation using compost amendment
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A Retentive Memory of Tetrachloroethene Respiration in Sulfurospirillum halorespirans - involved Proteins and a possible link to Acetylation of a Two-Component Regulatory System
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Using proteins to study how microbes contribute to soil ecosystem services: The current state and future perspectives of soil metaproteomics
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Interactions between fungi, algae, and bacteria: multispecies engineered living materials leverage function and structure
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Cyanobacterial blooms in wastewater treatment facilities: Significance and emerging monitoring strategies
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Soil metaproteomics – Comparative evaluation of protein extraction protocols
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Extreme environments: responses and adaptation to change
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Physiological traits of the Greenland sharkSomniosus microcephalusobtained during the TUNU-Expeditions to Northeast Greenland
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Metazoan adaptation to deep-sea hydrothermal vents
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Extremophiles populating high-level natural radiation areas (HLNRAs) in Iran
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Biodiversity, bioenergetic processes, and biotic and abiotic interactions
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Metazoan life in anoxic marine sediments
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Vertebrate viruses in polar ecosystems
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Life in extreme environments and the responses to change: the example of polar environments
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Life in the extreme environments of our planet under pressure
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The ecophysiology of responding to change in polar marine benthos
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The Southern Ocean: an extreme environment or just home of unique ecosystems?
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Microorganisms in cryoturbated organic matter of Arctic permafrost soils
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Benefits of Iterative Searches of Large Databases to Interpret Large Human Gut Metaproteomic Data Sets
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Who is who in litter decomposition? Metaproteomics reveals major microbial players and their biogeochemical functions
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Metaproteogenomic analysis of saliva samples from Parkinson’s disease patients with cognitive impairment
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Fungal volatile compounds induce production of the secondary metabolite Sodorifen in Serratia plymuthica PRI-2C
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Selective isolation of potentially phosphate-mobilizing, biosurfactant-producing and biodegradative bacteria associated with a sub-Arctic, terricolous lichen,Peltigera membranacea
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inferred← citeshttps://doi.org/10.1093/femsle/fnaa023openalex-snapshot
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Frondihabitans cladoniiphilus sp. nov., an actinobacterium of the family Microbacteriaceae isolated from lichen, and emended description of the genus Frondihabitans
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Analysis of the Peltigera membranacea metagenome indicates that lichen-associated bacteria are involved in phosphate solubilization
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inferred← citeshttps://doi.org/10.1101/2024.03.06.583579openalex-snapshot
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inferred← citeshttps://doi.org/10.1101/667428openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/1462-2920.14235openalex-snapshot
Gut microbial functional maturation and succession during human early life
inferred← citeshttps://doi.org/10.1111/1758-2229.13289openalex-snapshot
The microbiome of the lichen Lobaria pulmonaria varies according to climate on a subcontinental scale
inferred← citeshttps://doi.org/10.1111/j.1574-6968.2012.02508.xopenalex-snapshot
Bacterial taxa associated with the lung lichen Lobaria pulmonaria are differentially shaped by geography and habitat
inferred← citeshttps://doi.org/10.1111/j.1758-2229.2011.00272.xopenalex-snapshot
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inferred← citeshttps://doi.org/10.1111/jeu.12116openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/mec.13783openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/mec.16471openalex-snapshot
Lichen holobionts show compositional structure along elevation
inferred← citeshttps://doi.org/10.1128/9781555819583.ch36openalex-snapshot
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Lichenized Fungi and the Evolution of Symbiotic Organization
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Microbial communities of lichens
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inferred← citeshttps://doi.org/10.1186/1471-2164-13-575openalex-snapshot
Characterization of a transcriptome from a non-model organism, Cladonia rangiferina, the grey reindeer lichen, using high-throughput next generation sequencing and EST sequence data
inferred← citeshttps://doi.org/10.1186/1471-2164-14-870openalex-snapshot
Whole transcriptome characterization of the effects of dehydration and rehydration on Cladonia rangiferina, the grey reindeer lichen
inferred← citeshttps://doi.org/10.1186/s12862-019-1362-yopenalex-snapshot
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inferred← citeshttps://doi.org/10.1186/s12864-019-5629-xopenalex-snapshot
The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata
inferred← citeshttps://doi.org/10.1186/s13062-019-0253-xopenalex-snapshot
mPies: a novel metaproteomics tool for the creation of relevant protein databases and automatized protein annotation
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inferred← citeshttps://doi.org/10.1186/s40168-017-0303-5openalex-snapshot
Deciphering functional diversification within the lichen microbiota by meta-omics
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The use of tissue culture method for the study of lichenized fungi (Lobariaceae Chevall., Parmeliaceae Zenker.) of the European part of Russia
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Recent literature on lichens—225
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Microbiomes associated with saxicolous lichens inhabiting montane rocks in western Japan
inferred← citeshttps://doi.org/10.3389/fmicb.2012.00035openalex-snapshot
Effects of Resource Chemistry on the Composition and Function of Stream Hyporheic Biofilms
inferred← citeshttps://doi.org/10.3389/fmicb.2014.00094openalex-snapshot
Scanning a microhabitat: plant-microbe interactions revealed by confocal laser microscopy
inferred← citeshttps://doi.org/10.3389/fmicb.2016.00180openalex-snapshot
Understanding Microbial Multi-Species Symbioses
inferred← citeshttps://doi.org/10.3389/fmicb.2018.02959openalex-snapshot
Adaptions of Lichen Microbiota Functioning Under Persistent Exposure to Arsenic Contamination
inferred← citeshttps://doi.org/10.3389/fmicb.2019.00238openalex-snapshot
More Is Not Always Better: Evaluation of 1D and 2D-LC-MS/MS Methods for Metaproteomics
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A Robust and Universal Metaproteomics Workflow for Research Studies and Routine Diagnostics Within 24 h Using Phenol Extraction, FASP Digest, and the MetaProteomeAnalyzer
inferred← citeshttps://doi.org/10.3389/fmicb.2019.02395openalex-snapshot
Deciphering the Functioning of Microbial Communities: Shedding Light on the Critical Steps in Metaproteomics
inferred← citeshttps://doi.org/10.3389/fmicb.2021.623839openalex-snapshot
The Lichens’ Microbiota, Still a Mystery?
inferred← citeshttps://doi.org/10.3389/fnut.2019.00071openalex-snapshot
Detailed Soluble Proteome Analyses of a Dairy-Isolated Enterococcus faecalis: A Possible Approach to Assess Food Safety and Potential Probiotic Value
inferred← citeshttps://doi.org/10.3390/fermentation10040185openalex-snapshot
Metagenomic/Metaproteomic Investigation of the Microbiota in Dongbei Suaicai, a Traditional Fermented Chinese Cabbage
inferred← citeshttps://doi.org/10.3390/jof12010001openalex-snapshot
Phytomycobiomes and Ecosystem Services: Mechanisms, Evidence and Routes to Application
inferred← citeshttps://doi.org/10.3390/jof12100714openalex-snapshot
The First Complete Mitochondrial Genome of Lecanora argopholis and Its Phylogenetic Implications for Lichen-Forming Fungi
inferred← citeshttps://doi.org/10.3390/jof8060625openalex-snapshot
Antibiotic-Induced Treatments Reveal Stress-Responsive Gene Expression in the Endangered Lichen Lobaria pulmonaria
inferred← citeshttps://doi.org/10.3390/jof8080817openalex-snapshot
Microbiomic Analysis of Bacteria Associated with Rock Tripe Lichens in Continental and Maritime Antarctic Regions
inferred← citeshttps://doi.org/10.3390/life10120356openalex-snapshot
An Overview of Genomics, Phylogenomics and Proteomics Approaches in Ascomycota
inferred← citeshttps://doi.org/10.3390/microorganisms10112111openalex-snapshot
Chronicle of Research into Lichen-Associated Bacteria
inferred← citeshttps://doi.org/10.3390/microorganisms11061517openalex-snapshot
The Tripartite Lichen Ricasolia virens: Involvement of Cyanobacteria and Bacteria in Its Morphogenesis
inferred← citeshttps://doi.org/10.3390/microorganisms8020244openalex-snapshot
Responses of Acidobacteria Granulicella sp. WH15 to High Carbon Revealed by Integrated Omics Analyses
inferred← citeshttps://doi.org/10.3390/microorganisms9071347openalex-snapshot
Microbial Communities of Cladonia Lichens and Their Biosynthetic Gene Clusters Potentially Encoding Natural Products
inferred← citeshttps://doi.org/10.3390/w9060373openalex-snapshot
Effect of Sewage and Industrial Effluents on Bacterial and Archaeal Communities of Creek Sediments in the Taihu Basin
inferred← citeshttps://doi.org/10.5194/bg-9-4537-2012openalex-snapshot
Effects of stoichiometry and temperature perturbations on beech leaf litter decomposition, enzyme activities and protein expression
inferred← citeshttps://doi.org/10.53846/goediss-10393openalex-snapshot
Soil Multi-Meta-Omics: Unraveling microbial regulation at three post-genomic levels
inferred← citeshttps://doi.org/10.5586/asbp.3602openalex-snapshot
Internal structure and photosynthetic performance of Nostoc sp. colonies in the high Arctic
inferred← citeshttps://doi.org/10.70675/5778bb30z57e5z4b59z9cc9z3f0e5ee4a714openalex-snapshot
Production de synthons par des consortia microbiens à partir de paille de blé : approches macrocinétique, enzymatique et métaprotéomique
inferred← citeshttps://doi.org/10.70675/c0425229z8b5ez4b1bzb4bazf3ae38a51871openalex-snapshot
Discovery of active secondary metabolites from Paenibacillus odorifer, a lichen-associated bacterium
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