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Atg2: A novel phospholipid transfer protein that mediates de novo autophagosome biogenesis

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/1873-3468.12901openalex-snapshot

Differential requirement for ATG2A domains for localization to autophagic membranes and lipid droplets

inferredcites →https://doi.org/10.1002/ajmg.b.31206openalex-snapshot

Novel pathogenic mutations and copy number variations in the VPS13A Gene in patients with chorea‐acanthocytosis

inferredcites →https://doi.org/10.1016/0014-5793(93)80398-eopenalex-snapshot

Isolation and characterization of autophagy‐defective mutants of Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1016/j.bbalip.2015.12.003openalex-snapshot

SMP-domain proteins at membrane contact sites: Structure and function

inferredcites →https://doi.org/10.1016/j.ceb.2015.03.002openalex-snapshot

ER–mitochondria contact sites in yeast: beyond the myths of ERMES

inferredcites →https://doi.org/10.1016/j.cell.2014.01.070openalex-snapshot

Atomistic Autophagy: The Structures of Cellular Self-Digestion

inferredcites →https://doi.org/10.1016/j.chemphyslip.2018.11.001openalex-snapshot

Membrane-binding domains in autophagy

inferredcites →https://doi.org/10.1016/j.cub.2018.01.004openalex-snapshot

Mitophagy and Quality Control Mechanisms in Mitochondrial Maintenance

inferredcites →https://doi.org/10.1016/j.devcel.2016.06.015openalex-snapshot

The Intrinsically Disordered Protein Atg13 Mediates Supramolecular Assembly of Autophagy Initiation Complexes

inferredcites →https://doi.org/10.1016/j.ejmg.2017.12.007openalex-snapshot

Current state of knowledge in Chorea-Acanthocytosis as core Neuroacanthocytosis syndrome

inferredcites →https://doi.org/10.1016/j.febslet.2010.02.001openalex-snapshot

Current knowledge of the pre‐autophagosomal structure (PAS)

inferredcites →https://doi.org/10.1016/j.jmb.2016.02.021openalex-snapshot

An overview of macroautophagy in yeast

inferredcites →https://doi.org/10.1016/j.jmb.2019.02.019openalex-snapshot

Structural Conservation of the Two Phosphoinositide-Binding Sites in WIPI Proteins

inferredcites →https://doi.org/10.1016/j.molcel.2012.05.027openalex-snapshot

Two-Site Recognition of Phosphatidylinositol 3-Phosphate by PROPPINs in Autophagy

inferredcites →https://doi.org/10.1016/j.molcel.2013.12.011openalex-snapshot

Early Steps in Autophagy Depend on Direct Phosphorylation of Atg9 by the Atg1 Kinase

inferredcites →https://doi.org/10.1016/j.sbi.2016.09.010openalex-snapshot

Structural biology of the core autophagy machinery

inferredcites →https://doi.org/10.1038/nature14506openalex-snapshot

Receptor-mediated selective autophagy degrades the endoplasmic reticulum and the nucleus

inferredcites →https://doi.org/10.1038/ncb1991openalex-snapshot

A subdomain of the endoplasmic reticulum forms a cradle for autophagosome formation

inferredcites →https://doi.org/10.1038/ncb2979openalex-snapshot

Cargo recognition and trafficking in selective autophagy

inferredcites →https://doi.org/10.1038/nsmb.2822openalex-snapshot

Structural basis of starvation-induced assembly of the autophagy initiation complex

inferredcites →https://doi.org/10.1038/s41580-018-0071-5openalex-snapshot

Lipid transfer proteins: the lipid commute via shuttles, bridges and tubes

inferredcites →https://doi.org/10.1038/s41594-019-0203-4openalex-snapshot

Atg2 mediates direct lipid transfer between membranes for autophagosome formation

inferredcites →https://doi.org/10.1038/s41598-017-14337-5openalex-snapshot

Structure based biophysical characterization of the PROPPIN Atg18 shows Atg18 oligomerization upon membrane binding

inferredcites →https://doi.org/10.1073/pnas.1117797109openalex-snapshot

Molecular architecture of the multisubunit homotypic fusion and vacuole protein sorting (HOPS) tethering complex

inferredcites →https://doi.org/10.1073/pnas.1205128109openalex-snapshot

Structural and functional characterization of the two phosphoinositide binding sites of PROPPINs, a β-propeller protein family

inferredcites →https://doi.org/10.1073/pnas.1715592114openalex-snapshot

Crystal structures of Mmm1 and Mdm12–Mmm1 reveal mechanistic insight into phospholipid trafficking at ER-mitochondria contact sites

inferredcites →https://doi.org/10.1073/pnas.1806727115openalex-snapshot

The Atg2-Atg18 complex tethers pre-autophagosomal membranes to the endoplasmic reticulum for autophagosome formation

inferredcites →https://doi.org/10.1073/pnas.1811874115openalex-snapshot

Insights into autophagosome biogenesis from structural and biochemical analyses of the ATG2A-WIPI4 complex

inferredcites →https://doi.org/10.1074/jbc.m102342200openalex-snapshot

Apg2 Is a Novel Protein Required for the Cytoplasm to Vacuole Targeting, Autophagy, and Pexophagy Pathways

inferredcites →https://doi.org/10.1074/jbc.m102346200openalex-snapshot

Apg2p Functions in Autophagosome Formation on the Perivacuolar Structure

inferredcites →https://doi.org/10.1074/jbc.m112.397570openalex-snapshot

Structure-based Analyses Reveal Distinct Binding Sites for Atg2 and Phosphoinositides in Atg18

inferredcites →https://doi.org/10.1074/jbc.m803180200openalex-snapshot

The Atg18-Atg2 Complex Is Recruited to Autophagic Membranes via Phosphatidylinositol 3-Phosphate and Exerts an Essential Function

inferredcites →https://doi.org/10.1074/jbc.r117.802512openalex-snapshot

The lipopolysaccharide transport (Lpt) machinery: A nonconventional transporter for lipopolysaccharide assembly at the outer membrane of Gram-negative bacteria

inferredcites →https://doi.org/10.1080/15548627.2017.1359381openalex-snapshot

Architecture of the ATG2B-WDR45 complex and an aromatic Y/HF motif crucial for complex formation

inferredcites →https://doi.org/10.1083/jcb.119.2.301openalex-snapshot

Autophagy in yeast demonstrated with proteinase-deficient mutants and conditions for its induction.

inferredcites →https://doi.org/10.1083/jcb.124.6.903openalex-snapshot

Ultrastructural analysis of the autophagic process in yeast: detection of autophagosomes and their characterization

inferredcites →https://doi.org/10.1083/jcb.200711112openalex-snapshot

Quantitative analysis of autophagy-related protein stoichiometry by fluorescence microscopy

inferredcites →https://doi.org/10.1083/jcb.200912089openalex-snapshot

An Atg9-containing compartment that functions in the early steps of autophagosome biogenesis

inferredcites →https://doi.org/10.1083/jcb.201202061openalex-snapshot

Atg9 vesicles are an important membrane source during early steps of autophagosome formation

inferredcites →https://doi.org/10.1083/jcb.201502105openalex-snapshot

ER–mitochondrial junctions can be bypassed by dominant mutations in the endosomal protein Vps13

inferredcites →https://doi.org/10.1083/jcb.201710116openalex-snapshot

Atg9 establishes Atg2-dependent contact sites between the endoplasmic reticulum and phagophores

inferredcites →https://doi.org/10.1083/jcb.201807019openalex-snapshot

VPS13A and VPS13C are lipid transport proteins differentially localized at ER contact sites

inferredcites →https://doi.org/10.1083/jcb.201809032openalex-snapshot

COPII vesicles contribute to autophagosomal membranes

inferredcites →https://doi.org/10.1083/jcb.201811139openalex-snapshot

ATG2 transports lipids to promote autophagosome biogenesis

inferredcites →https://doi.org/10.1091/mbc.e11-09-0785openalex-snapshot

Mammalian Atg2 proteins are essential for autophagosome formation and important for regulation of size and distribution of lipid droplets

inferredcites →https://doi.org/10.1091/mbc.e13-07-0381openalex-snapshot

ER exit sites are physical and functional core autophagosome biogenesis components

inferredcites →https://doi.org/10.1111/j.1365-2443.2007.01050.xopenalex-snapshot

Hierarchy of Atg proteins in pre‐autophagosomal structure organization

inferredcites →https://doi.org/10.1111/j.1365-2443.2008.01188.xopenalex-snapshot

Transport of phosphatidylinositol 3‐phosphate into the vacuole via autophagic membranes in Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1146/annurev-biophys-060414-034248openalex-snapshot

Mechanisms of Autophagy

inferredcites →https://doi.org/10.1146/annurev-cellbio-092910-154005openalex-snapshot

The Role of Atg Proteins in Autophagosome Formation

inferredcites →https://doi.org/10.1194/jlr.m046359openalex-snapshot

Lipid droplet and early autophagosomal membrane targeting of Atg2A and Atg14L in human tumor cells

inferredcites →https://doi.org/10.1242/jcs.100065openalex-snapshot

High-curvature domains of the ER are important for the organization of ER exit sites in Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1242/jcs.122960openalex-snapshot

Fine mapping of autophagy-related proteins during autophagosome formation in Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1242/jcs.146258openalex-snapshot

WIPI proteins: essential PtdIns3 P effectors at the nascent autophagosome

inferredcites →https://doi.org/10.1247/csf.20.465openalex-snapshot

Analysis of the Membrane Structures Involved in Autophagy in Yeast by Freeze-Replica Method.

inferredcites →https://doi.org/10.1371/journal.pone.0181047openalex-snapshot

Atg4 plays an important role in efficient expansion of autophagic isolation membranes by cleaving lipidated Atg8 in Saccharomyces cerevisiae

inferredcites →https://doi.org/10.15252/embj.201489083openalex-snapshot

Bulk RNA degradation by nitrogen starvation‐induced autophagy in yeast

inferredcites →https://doi.org/10.15252/embr.201744559openalex-snapshot

Remodeling of ER‐exit sites initiates a membrane supply pathway for autophagosome biogenesis

inferredcites →https://doi.org/10.4161/auto.5.8.10274openalex-snapshot

3D tomography reveals connections between the phagophore and endoplasmic reticulum

inferredcites →https://doi.org/10.7554/elife.45777openalex-snapshot

The autophagic membrane tether ATG2A transfers lipids between membranes

inferredcites →https://doi.org/10.7554/elife.45777.020openalex-snapshot

Author response: The autophagic membrane tether ATG2A transfers lipids between membranes

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Intricacies of Lipid Supply in Autophagic Membrane Expansion

inferred← citeshttps://doi.org/10.1002/1873-3468.14726openalex-snapshot

Novel insights into autophagosome biogenesis revealed by cryo‐electron tomography

inferred← citeshttps://doi.org/10.1002/1873-3468.14742openalex-snapshot

Structural view on autophagosome formation

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Artificial Peptides as Autophagy Modulators

inferred← citeshttps://doi.org/10.1002/mco2.150openalex-snapshot

Autophagy in health and disease: From molecular mechanisms to therapeutic target

inferred← citeshttps://doi.org/10.1007/s00018-020-03621-9openalex-snapshot

The crystal structure of Atg18 reveals a new binding site for Atg2 in Saccharomyces cerevisiae

inferred← citeshttps://doi.org/10.1007/s12374-020-09252-8openalex-snapshot

Birth, Growth, Maturation, and Demise of Plant Autophagic Vesicles

inferred← citeshttps://doi.org/10.1007/s13238-020-00793-9openalex-snapshot

Lipids and membrane-associated proteins in autophagy

inferred← citeshttps://doi.org/10.1016/b978-0-12-822003-0.00002-4openalex-snapshot

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Non-coding RNAs as regulators of autophagy in chondrocytes: Mechanisms and implications for osteoarthritis

inferred← citeshttps://doi.org/10.1016/j.bbalip.2020.158868openalex-snapshot

Lipid profiles of autophagic structures isolated from wild type and Atg2 mutant Drosophila

inferred← citeshttps://doi.org/10.1016/j.bbalip.2021.158956openalex-snapshot

Atg2 and Atg9: Intermembrane and interleaflet lipid transporters driving autophagy

inferred← citeshttps://doi.org/10.1016/j.bbrc.2026.153507openalex-snapshot

Muscle-specific expression of Atg2 and high-fat diet influence age-related deterioration of skeletal muscle in aged drosophila via the ATGL/Sirt1/PGC-1α pathway

inferred← citeshttps://doi.org/10.1016/j.bcp.2023.115576openalex-snapshot

A perspective on autophagy and transcription factor EB in Alcohol-Associated Alzheimer’s disease

inferred← citeshttps://doi.org/10.1016/j.ceb.2020.02.008openalex-snapshot

Inter-organelle lipid transfer: a channel model for Vps13 and chorein-N motif proteins

inferred← citeshttps://doi.org/10.1016/j.drudis.2024.104224openalex-snapshot

Highlighting roles of autophagy in human diseases: a perspective from single-cell RNA sequencing analyses

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Ultrasonic regulation of β-lactoglobulin/puerarin complex: structural modification, digestive properties, and allergenicity suppression through controlled polyphenol interactions

inferred← citeshttps://doi.org/10.1016/j.fsi.2026.111593openalex-snapshot

Shrimp TM9SF4 facilitates WSSV infection probably through interacting with viral VP24 and regulating host autophagy

inferred← citeshttps://doi.org/10.1016/j.jmb.2024.168891openalex-snapshot

Phospholipid Transport Across the Bacterial Periplasm Through the Envelope-spanning Bridge YhdP

inferred← citeshttps://doi.org/10.1016/j.jmb.2025.169235openalex-snapshot

Structural Insights into Autophagy in the AlphaFold Era

inferred← citeshttps://doi.org/10.1016/j.molcel.2026.03.002openalex-snapshot

Mechanosensory channels mediate ER Ca2+ transients to trigger assembly of autophagosome initiation sites for degradation of ER subdomains

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Whole exome sequencing reveals putatively novel associations in retinopathies and drusen formation

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WIPI4 loss linked to ferroptosis

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In vitro reconstitution of autophagic processes

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In situ structural analysis reveals membrane shape transitions during autophagosome formation

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In situ snapshots along a mammalian selective autophagy pathway

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Growth, fusion and degradation of lipid droplets: advances in lipid droplet regulatory protein

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Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition) 1

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TOR and MAP kinase pathways synergistically regulate autophagy in response to nutrient depletion in fission yeast

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AI-based AlphaFold2 significantly expands the structural space of the autophagy pathway

inferred← citeshttps://doi.org/10.1083/jcb.202104073openalex-snapshot

Vps13D functions in a Pink1-dependent and Parkin-independent mitophagy pathway

inferred← citeshttps://doi.org/10.1091/mbc.e24-05-0236openalex-snapshot

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Atg2 controls Drosophila hematopoiesis through the PVR / TOR signaling pathways

inferred← citeshttps://doi.org/10.1111/gtc.12733openalex-snapshot

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Intracellular Lipid Homeostasis and Trafficking in Autophagy

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