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Unusual Origin of a Nuclear Pseudogene in the Italian Wall Lizard: Intergenomic and Interspecific Transfer of a Large Section of the Mitochondrial Genome in the Genus Podarcis (Lacertidae)
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Numt, a recent transfer and tandem amplification of mitochondrial DNA to the nuclear genome of the domestic cat
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Molecular cloning: A laboratory manual
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Nuclear integrations: challenges for mitochondrial DNA markers
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Natural hybridization in Podarcis sicula and P. wagleriana (Reptilia: Lacertidae)
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Mitochondrial phylogeography of the Dalmatian wall lizard, (Lacertidae)
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Reexamination of the Iberian and North African Podarcis (Squamata: Lacertidae) phylogeny based on increased mitochondrial DNA sequencing
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The general stochastic model of nucleotide substitution
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Mitochondrial pseudogenes: evolution's misplaced witnesses
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Molecular phylogeny and biogeography of the wall-lizard Podarcis erhardii (Squamata: Lacertidae)
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Insertions and duplications of mtDNA in the nuclear genomes of Old World monkeys and hominoids
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A nuclear 'fossil' of the mitochondrial D-loop and the origin of modern humans
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Widespread horizontal transfer of mitochondrial genes in flowering plants
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TCS: a computer program to estimate gene genealogies
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Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella
inferredcites →https://doi.org/10.1073/pnas.84.20.7183openalex-snapshot
Tandem duplications in animal mitochondrial DNAs: variation in incidence and gene content among lizards.
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Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers.
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Unusual horizontal transfer of a long interspersed nuclear element between distant vertebrate classes
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Likelihood-Based Tests of Topologies in Phylogenetics
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MODELTEST: testing the model of DNA substitution.
inferredcites →https://doi.org/10.1093/bioinformatics/17.12.1244openalex-snapshot
MEGA2: molecular evolutionary genetics analysis software
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LENGTH VARIATION AND HETEROPLASMY ARE FREQUENT IN MITOCHONDRIAL DNA FROM PARTHENOGENETIC AND BISEXUAL LIZARDS (GENUS CNEMIDOPHORUS)
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A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation.
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Sequences with the potential to form stem-and-loop structures are associated with coding-region duplications in animal mitochondrial DNA.
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NUMTs in Sequenced Eukaryotic Genomes
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003934openalex-snapshot
Mitochondrial Pseudogenes Are Pervasive and Often Insidious in the Snapping Shrimp Genus Alpheus
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004060openalex-snapshot
Evolution of Mitochondrial Cytochrome b Pseudogene in Genus Nycticebus
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Numerous transposed sequences of mitochondrial cytochrome oxidase I-II in aphids of the genus Sitobion (Hemiptera: Aphididae)
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Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference
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Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040410openalex-snapshot
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040714openalex-snapshot
Mitochondrial DNA-like sequence in the nuclear genome of an akodontine rodent.
inferredcites →https://doi.org/10.1098/rspb.1995.0170openalex-snapshot
Comparison of a mitochondrial gene and a corresponding nuclear pseudogene
inferredcites →https://doi.org/10.1111/j.1095-8312.2000.tb01254.xopenalex-snapshot
Toward the phylogeny of the family Lacertidae - Why 4708 base pairs of mtDNA sequences cannot draw the picture
inferredcites →https://doi.org/10.1111/j.1365-294x.2005.02427.xopenalex-snapshot
Phylogeography of the Italian wall lizard, Podarcis sicula, as revealed by mitochondrial DNA sequences
inferredcites →https://doi.org/10.1111/j.1558-5646.1975.tb00813.xopenalex-snapshot
EVOLUTIONARY GENETICS OF INSULAR ADRIATIC LIZARDS
inferredcites →https://doi.org/10.1126/science.3018925openalex-snapshot
Tandem Duplication of D-Loop and Ribosomal RNA Sequences in Lizard Mitochondrial DNA
inferredcites →https://doi.org/10.1163/15685380260449199openalex-snapshot
Genetic evidence of natural hybridization between Podarcis sicula and Podarcis tiliguerta (Reptilia: Lacertidae)
inferredcites →https://doi.org/10.1163/156853805774408676openalex-snapshot
Determination of genetic diversity within the insular lizard Podarcis tiliguerta using mtDNA sequence data, with a reassessment of the phylogeny of Podarcis
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Mitochondrial DNA polymorphism and heteroplasmy in populations of the three species of Tropidurus of the nanuzae group (Squamata, Tropiduridae)
inferredcites →https://doi.org/10.2307/1447608openalex-snapshot
Relationships of Wall Lizards, Podarcis (Reptilia: Lacertidae) Based on Mitochondrial DNA Sequences
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Molecular phylogeny and biogeography of the genus Acanthodactylus Fitzinger, 1834 (Reptilia: Lacertidae) in Iran, inferred from mtDNA Sequences
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Human introductions create opportunities for intra-specific hybridization in an alien lizard
inferred← citeshttps://doi.org/10.1007/s10530-013-0480-5openalex-snapshot
Strong genetic differentiation due to multiple founder events during a recent range expansion of an introduced wall lizard population
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Freshwater vertebrate metabarcoding on Illumina platforms using double-indexed primers of the mitochondrial 16S rRNA gene
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Complete sequences of mitochondria genomes of Aedes aegypti and Culex quinquefasciatus and comparative analysis of mitochondrial DNA fragments inserted in the nuclear genomes
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Tracing the maternal origin of the common wall lizard (Podarcis muralis) on the northern range margin in Central Europe
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Effects of fragmentation on genetic diversity in island populations of the Aegean wall lizard Podarcis erhardii (Lacertidae, Reptilia)
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Mitochondrial phylogeny shows multiple independent ecological transitions and northern dispersion despite of Pleistocene glaciations in meadow and steppe vipers (Vipera ursinii and Vipera renardi)
inferred← citeshttps://doi.org/10.1016/j.ympev.2021.107169openalex-snapshot
Fossil-calibrated time tree of Podarcis wall lizards provides limited support for biogeographic calibration models
inferred← citeshttps://doi.org/10.1016/j.ympev.2024.108221openalex-snapshot
Genomic and transcriptomic perspectives on the origin and evolution of NUMTs in Orthoptera
inferred← citeshttps://doi.org/10.1016/j.zool.2012.01.003openalex-snapshot
Variation in the cranium shape of wall lizards (Podarcis spp.): effects of phylogenetic constraints, allometric constraints and ecology
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Extensive introgression and mosaic genomes of Mediterranean endemic lizards
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Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified
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Cryptic diversity and unexpected evolutionary patterns in the meadow lizard,Darevskia praticola(Eversmann, 1834)
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Mitogenome evolution in theLacerta viridiscomplex (Lacertidae, Squamata) reveals phylogeny of diverging clades
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Genetic differentiation predicts body size divergence between island and mainland populations of common wall lizards (Podarcis muralis)
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Numt Parser: Automated identification and removal of nuclear mitochondrial pseudogenes (numts) for accurate mitochondrial genome reconstruction in Panthera
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Nuclear–Mitochondrial Sequences as Witnesses of Past Interbreeding and Population Diversity in the Jumping Bristletail Mesomachilis
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Uncovering historical signature of mitochondrial DNA hidden in the nuclear genome: the biogeography of S chistocercarevisited
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When cryptic diversity blurs the picture: a cautionary tale from Iberian and North African Podarcis wall lizards
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Numts help to reconstruct the demographic history of the ocellated lizard (Lacerta lepida) in a secondary contact zone
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Rapid genetic assimilation of native wall lizard populations ( Podarcis muralis ) through extensive hybridization with introduced lineages
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High mitochondrial haplotype diversity of Coleps sp. (Ciliophora: Prostomatida)
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Cryptic niche conservatism among evolutionary lineages of an invasive lizard
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From southern refugia to the northern range margin: genetic population structure of the common wall lizard, Podarcis muralis
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Patterns of cranial ontogeny in lacertid lizards: morphological and allometric disparity
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Ghost mtDNA haplotypes generated by fortuitous NUMTs can deeply disturb infra-specific genetic diversity and phylogeographic pattern
inferred← citeshttps://doi.org/10.1111/mec.13206openalex-snapshot
Widespread primary, but geographically restricted secondary, human introductions of wall lizards, Podarcis muralis
inferred← citeshttps://doi.org/10.1111/mec.13810openalex-snapshot
Cityscape genetics: structural vs. functional connectivity of an urban lizard population
inferred← citeshttps://doi.org/10.1111/zsc.12462openalex-snapshot
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Unravelling the origin of the common wall lizards (Podarcis muralis) in outh-eastern Europe using mitochondrial evidence
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