On the public citation graph

Genomic and Transcriptomic Perspectives on the Origin, Evolution, and Application of Numts in Orthoptera

https://doi.org/10.2139/ssrn.4774114
0 signed · 88 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/0471250953.bi0203s00openalex-extracted
Multiple Sequence Alignment Using ClustalW and ClustalX
inferredcites →https://doi.org/10.1002/ece3.3163openalex-extracted
Genome size in arthropods; different roles of phylogeny, habitat and life history in insects and crustaceans
inferredcites →https://doi.org/10.1002/ece3.5015openalex-extracted
EasyCodeML: A visual tool for analysis of selection using CodeML
inferredcites →https://doi.org/10.1002/humu.10304openalex-extracted
Mitochondrial DNA‐like sequences in the nucleus (NUMTs): Insights into our African origins and the mechanism of foreign DNA integration
inferredcites →https://doi.org/10.1002/imt2.87openalex-extracted
Using PhyloSuite for molecular phylogeny and tree‐based analyses
inferredcites →https://doi.org/10.1007/bf01734101openalex-extracted
Mitochondrial DNA sequences of primates: Tempo and mode of evolution
inferredcites →https://doi.org/10.1007/s00239-003-2485-7openalex-extracted
Rates of DNA Duplication and Mitochondrial DNA Insertion in the Human Genome
inferredcites →https://doi.org/10.1007/s00239-005-0259-0openalex-extracted
Unusual Origin of a Nuclear Pseudogene in the Italian Wall Lizard: Intergenomic and Interspecific Transfer of a Large Section of the Mitochondrial Genome in the Genus Podarcis (Lacertidae)
inferredcites →https://doi.org/10.1007/s10577-011-9231-6openalex-extracted
New genome size estimates of 134 species of arthropods
inferredcites →https://doi.org/10.1016/0169-5347(96)10031-8openalex-extracted
Nuclear integrations: challenges for mitochondrial DNA markers
inferredcites →https://doi.org/10.1016/j.anbehav.2011.06.011openalex-extracted
Molecular approaches in behavioural research: a cautionary note regarding mitochondrial transfers to the nucleus (numts)
inferredcites →https://doi.org/10.1016/j.cell.2008.06.043openalex-extracted
The Mitochondrial Proteome: From Inventory to Function
inferredcites →https://doi.org/10.1016/j.gene.2007.07.003openalex-extracted
Extensive mitochondrial DNA transfer in a rapidly evolving rodent has been mediated by independent insertion events and by duplications
inferredcites →https://doi.org/10.1016/j.ympev.2015.03.009openalex-extracted
A survey of transposable element classification systems – A call for a fundamental update to meet the challenge of their diversity and complexity
inferredcites →https://doi.org/10.1016/j.ympev.2020.106734openalex-extracted
Evolutionary rates of and selective constraints on the mitochondrial genomes of Orthoptera insects with different wing types
inferredcites →https://doi.org/10.1016/j.ympev.2023.107722openalex-extracted
Bringing to light nuclear-mitochondrial insertions in the genomes of nocturnal predatory birds
inferredcites →https://doi.org/10.1016/s0074-7696(08)62066-5openalex-extracted
Animal Mitochondrial DNA: Structure and Evolution
inferredcites →https://doi.org/10.1016/s0074-7696(08)62223-8openalex-extracted
Escape and Migration of Nucleic Acids between Chloroplasts, Mitochondria, and the Nucleus
inferredcites →https://doi.org/10.1016/s0169-5347(01)02151-6openalex-extracted
Mitochondrial pseudogenes: evolution's misplaced witnesses
inferredcites →https://doi.org/10.1016/s0960-9822(02)00441-4openalex-extracted
Mitochondrial DNA: Molecular fossils in the nucleus
inferredcites →https://doi.org/10.1038/301631a0openalex-extracted
Mitochondrial DNA sequences in the nuclear genome of a locust
inferredcites →https://doi.org/10.1038/346376a0openalex-extracted
Escape of DNA from mitochondria to the nucleus in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1038/352255a0openalex-extracted
Paternal inheritance of mitochondrial DNA in mice
inferredcites →https://doi.org/10.1038/378485a0openalex-extracted
Insertions and duplications of mtDNA in the nuclear genomes of Old World monkeys and hominoids
inferredcites →https://doi.org/10.1038/378489a0openalex-extracted
A nuclear 'fossil' of the mitochondrial D-loop and the origin of modern humans
inferredcites →https://doi.org/10.1038/47076openalex-extracted
Mitochondrial DNA repairs double-strand breaks in yeast chromosomes
inferredcites →https://doi.org/10.1038/nrg1271openalex-extracted
Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes
inferredcites →https://doi.org/10.1038/s41586-021-03819-2openalex-extracted
Highly accurate protein structure prediction with AlphaFold
inferredcites →https://doi.org/10.1038/s41586-022-05288-7openalex-extracted
Nuclear-embedded mitochondrial DNA sequences in 66,083 human genomes
inferredcites →https://doi.org/10.1046/j.1365-294x.1996.00078.xopenalex-extracted
Highly conserved nuclear copies of the mitochondrial control region in the desert locust Schistocerca gregaria: some implications for population studies
inferredcites →https://doi.org/10.1046/j.1365-294x.2003.02070.xopenalex-extracted
Unreliable mtDNA data due to nuclear insertions: a cautionary tale from analysis of humans and other great apes
inferredcites →https://doi.org/10.1073/pnas.0803076105openalex-extracted
Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified
inferredcites →https://doi.org/10.1073/pnas.1117890109openalex-extracted
Environmental stress increases the entry of cytoplasmic organellar DNA into the nucleus in plants
inferredcites →https://doi.org/10.1073/pnas.1500012112openalex-extracted
Why chloroplasts and mitochondria retain their own genomes and genetic systems: Colocation for redox regulation of gene expression
inferredcites →https://doi.org/10.1073/pnas.76.4.1967openalex-extracted
Rapid evolution of animal mitochondrial DNA.
inferredcites →https://doi.org/10.1093/bioinformatics/btab705openalex-extracted
New strategies to improve minimap2 alignment accuracy
inferredcites →https://doi.org/10.1093/bioinformatics/bty191openalex-extracted
Minimap2: pairwise alignment for nucleotide sequences
inferredcites →https://doi.org/10.1093/dnares/dsx019openalex-extracted
A genomic landscape of mitochondrial DNA insertions in the pig nuclear genome provides evolutionary signatures of interspecies admixture
inferredcites →https://doi.org/10.1093/gbe/evt070openalex-extracted
Cytoplasmic Organelle DNA Preferentially Inserts into Open Chromatin
inferredcites →https://doi.org/10.1093/genetics/110.4.689openalex-extracted
LENGTH VARIATION AND HETEROPLASMY ARE FREQUENT IN MITOCHONDRIAL DNA FROM PARTHENOGENETIC AND BISEXUAL LIZARDS (GENUS CNEMIDOPHORUS)
inferredcites →https://doi.org/10.1093/genetics/126.3.657openalex-extracted
Incomplete maternal transmission of mitochondrial DNA in Drosophila.
inferredcites →https://doi.org/10.1093/hmg/11.2.133openalex-extracted
High aggregate burden of somatic mtDNA point mutations in aging and Alzheimer's disease brain
inferredcites →https://doi.org/10.1093/molbev/msh110openalex-extracted
NUMTs in Sequenced Eukaryotic Genomes
inferredcites →https://doi.org/10.1093/molbev/msm088openalex-extracted
PAML 4: Phylogenetic Analysis by Maximum Likelihood
inferredcites →https://doi.org/10.1093/molbev/mst010openalex-extracted
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
inferredcites →https://doi.org/10.1093/molbev/msu300openalex-extracted
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
inferredcites →https://doi.org/10.1093/molbev/msy096openalex-extracted
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
inferredcites →https://doi.org/10.1093/molbev/msy112openalex-extracted
Comparative Genomics Reveals a Burst of Homoplasy-Free Numt Insertions
inferredcites →https://doi.org/10.1093/nar/gkab301openalex-extracted
Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation
inferredcites →https://doi.org/10.1093/nar/gkz173openalex-extracted
MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003798openalex-extracted
Genomic Gigantism: DNA Loss Is Slow in Mountain Grasshoppers
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003934openalex-extracted
Mitochondrial Pseudogenes Are Pervasive and Often Insidious in the Snapping Shrimp Genus Alpheus
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025612openalex-extracted
Numerous transposed sequences of mitochondrial cytochrome oxidase I-II in aphids of the genus Sitobion (Hemiptera: Aphididae)
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025650openalex-extracted
Mitochondrial DNA Migration Events in Yeast and Humans: Integration by a Common End-joining Mechanism and Alternative Perspectives on Nucleotide Substitution Patterns
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025763openalex-extracted
Rates of nuclear and cytoplasmic mitochondrial DNA sequence divergence in mammals
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026320openalex-extracted
Frequent Assimilation of Mitochondrial DNA by Grasshopper Nuclear Genomes
inferredcites →https://doi.org/10.1098/rspb.1995.0170openalex-extracted
Comparison of a mitochondrial gene and a corresponding nuclear pseudogene
inferredcites →https://doi.org/10.1098/rspb.2002.2218openalex-extracted
Biological identifications through DNA barcodes
inferredcites →https://doi.org/10.1111/1365-2435.12177openalex-extracted
Mitochondrial DNA : more than an evolutionary bystander
inferredcites →https://doi.org/10.1111/1749-4877.12582openalex-extracted
Genomic landscape of mitochondrial DNA insertions in 23 bat genomes: characteristics, loci, phylogeny, and polymorphism
inferredcites →https://doi.org/10.1111/1755-0998.13096openalex-extracted
PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies
inferredcites →https://doi.org/10.1111/age.12648openalex-extracted
Few mitochondrial DNA sequences are inserted into the turkey (Meleagris gallopavo) nuclear genome: evolutionary analyses and informativity in the domestic lineage
inferredcites →https://doi.org/10.1111/cla.12013openalex-extracted
Uncovering historical signature of mitochondrial DNA hidden in the nuclear genome: the biogeography of S chistocercarevisited
inferredcites →https://doi.org/10.1111/cla.12116openalex-extracted
300 million years of diversification: elucidating the patterns of orthopteran evolution based on comprehensive taxon and gene sampling
inferredcites →https://doi.org/10.1111/j.1365-294x.1996.tb00317.xopenalex-extracted
Highly conserved nuclear copies of the mitochondrial control region in the desert locust Schistocerca gregaria: some implications for population studies
inferredcites →https://doi.org/10.1111/j.1365-294x.2004.02382.xopenalex-extracted
Nuclear insertions help and hinder inference of the evolutionary history of gorilla mtDNA
inferredcites →https://doi.org/10.1111/j.1365-3113.2007.00385.xopenalex-extracted
Double trouble for grasshopper molecular systematics: intra‐individual heterogeneity of both mitochondrial 12S‐valine‐16S and nuclear internal transcribed spacer ribosomal DNA sequences in Hesperotettix viridis (Orthoptera: Acrididae)
inferredcites →https://doi.org/10.1111/j.1755-0998.2009.02823.xopenalex-extracted
Assessing the effects of primer specificity on eliminating numt coamplification in DNA barcoding: a case study from Orthoptera (Arthropoda: Insecta)
inferredcites →https://doi.org/10.1126/science.1089670openalex-extracted
Mobile Elements: Drivers of Genome Evolution
inferredcites →https://doi.org/10.1126/science.1672472openalex-extracted
Heteroplasmy Suggests Limited Biparental Inheritance of Mytilus Mitochondrial DNA
inferredcites →https://doi.org/10.1146/annurev.arplant.043008.092119openalex-extracted
DNA Transfer from Organelles to the Nucleus: The Idiosyncratic Genetics of Endosymbiosis
inferredcites →https://doi.org/10.1186/1471-2156-10-11openalex-extracted
Mitochondrial pseudogenes in the nuclear genome of Aedes aegypti mosquitoes: implications for past and future population genetic studies
inferredcites →https://doi.org/10.1186/s12915-022-01441-wopenalex-extracted
Transposable element expansion and low-level piRNA silencing in grasshoppers may cause genome gigantism
inferredcites →https://doi.org/10.1371/journal.pbio.0020273openalex-extracted
Continued Colonization of the Human Genome by Mitochondrial DNA
inferredcites →https://doi.org/10.1371/journal.pbio.0060204openalex-extracted
Direct Estimation of the Mitochondrial DNA Mutation Rate in Drosophila melanogaster
inferredcites →https://doi.org/10.1371/journal.pgen.1000237openalex-extracted
Numt-Mediated Double-Strand Break Repair Mitigates Deletions during Primate Genome Evolution
inferredcites →https://doi.org/10.1371/journal.pgen.1000834openalex-extracted
Molecular Poltergeists: Mitochondrial DNA Copies (numts) in Sequenced Nuclear Genomes
inferredcites →https://doi.org/10.1371/journal.pone.0110508openalex-extracted
Rampant Nuclear Insertion of mtDNA across Diverse Lineages within Orthoptera (Insecta)
inferredcites →https://doi.org/10.1371/journal.pone.0275551openalex-extracted
New estimates of genome size in Orthoptera and their evolutionary implications
inferredcites →https://doi.org/10.1371/journal.pone.0286620openalex-extracted
Interrogating 1000 insect genomes for NUMTs: A risk assessment for estimates of species richness
inferredcites →https://doi.org/10.14411/eje.2002.019openalex-extracted
Raphogla rubra gen. n., sp. n., the oldest representative of the clade of modern Ensifera (Orthoptera: Tettigoniidea, Gryllidea)
inferredcites →https://doi.org/10.1651/08-3020.1openalex-extracted
“COI-like” Sequences Are Becoming Problematic in Molecular Systematic and DNA Barcoding Studies
inferredcites →https://doi.org/10.2307/4089130openalex-extracted
Numts: A Challenge for Avian Systematics and Population Biology
inferredcites →https://doi.org/10.3389/fevo.2022.844443openalex-extracted
A Burst of Numt Insertion in the Dasyuridae Family During Marsupial Evolution
inferredcites →https://doi.org/10.3389/fgene.2021.693541openalex-extracted
The Evolutionary Patterns of Genome Size in Ensifera (Insecta: Orthoptera)
inferredcites →https://doi.org/10.3390/insects11100680openalex-extracted
Tracking the Distribution and Burst of Nuclear Mitochondrial DNA Sequences (NUMTs) in Fig Wasp Genomes
inferredcites →https://doi.org/10.3390/insects12090837openalex-extracted
Comparative Analysis of Transposable Elements in Genus Calliptamus Grasshoppers Revealed That Satellite DNA Contributes to Genome Size Variation
inferredcites →https://doi.org/10.3390/insects12110963openalex-extracted
Genus-Wide Characterization of Nuclear Mitochondrial DNAs in Bumblebee (Hymenoptera: Apidae) Genomes
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.