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Selection on Length Mutations After Frameshift Can Explain the Origin and Retention of the AP3/DEF-Like Paralogues in Impatiens

https://doi.org/10.1007/s00239-008-9085-5
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-3-642-86659-3openalex-snapshot
Evolution by Gene Duplication
inferredcites →https://doi.org/10.1007/978-94-011-4221-2_6openalex-snapshot
A short history of MADS-box genes in plants
inferredcites →https://doi.org/10.1016/0092-8674(92)90144-2openalex-snapshot
The homeotic gene APETALA3 of Arabidopsis thaliana encodes a MADS box and is expressed in petals and stamens
inferredcites →https://doi.org/10.1016/0092-8674(94)90509-6openalex-snapshot
Arabidopsis homeotic gene APETALA3 ectopic expression: Transcriptional and posttranscriptional regulation determine floral organ identity
inferredcites →https://doi.org/10.1016/j.gene.2006.05.022openalex-snapshot
Genome-wide analysis of the MADS-box gene family in Populus trichocarpa
inferredcites →https://doi.org/10.1016/j.tig.2005.05.013openalex-snapshot
Functional divergence of proteins through frameshift mutations
inferredcites →https://doi.org/10.1016/j.ympev.2006.11.016openalex-snapshot
Phylogenetic utility of the AP3/DEF K-domain and its molecular evolution in Impatiens (Balsaminaceae)
inferredcites →https://doi.org/10.1016/s0169-5347(03)00033-8openalex-snapshot
Evolution by gene duplication: an update
inferredcites →https://doi.org/10.1016/s1055-7903(03)00207-0openalex-snapshot
The major clades of MADS-box genes and their role in the development and evolution of flowering plants
inferredcites →https://doi.org/10.1023/a:1006332105728openalex-snapshot
A short history of MADS-box genes in plants
inferredcites →https://doi.org/10.1038/35054083openalex-snapshot
Complexes of MADS-box proteins are sufficient to convert leaves into floral organs
inferredcites →https://doi.org/10.1038/nature01521openalex-snapshot
Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events
inferredcites →https://doi.org/10.1038/ng1575openalex-snapshot
Alternative splicing and gene duplication are inversely correlated evolutionary mechanisms
inferredcites →https://doi.org/10.1073/pnas.2033555100openalex-snapshot
Positive selection on protein-length in the evolution of a primate sperm ion channel
inferredcites →https://doi.org/10.1073/pnas.2535513100openalex-snapshot
The early stages of duplicate gene evolution
inferredcites →https://doi.org/10.1073/pnas.93.9.4063openalex-snapshot
Mapping the protein regions responsible for the functional specificities of the Arabidopsis MADS domain organ-identity proteins.
inferredcites →https://doi.org/10.1073/pnas.94.6.2415openalex-snapshot
Floral homeotic genes were recruited from homologous MADS-box genes preexisting in the common ancestor of ferns and seed plants
inferredcites →https://doi.org/10.1073/pnas.97.10.5328openalex-snapshot
An ancestral MADS-box gene duplication occurred before the divergence of plants and animals
inferredcites →https://doi.org/10.1086/317576openalex-snapshot
Evolution of the Petal and Stamen Developmental Programs: Evidence from Comparative Studies of the Lower Eudicots and Basal Angiosperms
inferredcites →https://doi.org/10.1093/bioinformatics/13.5.555openalex-snapshot
PAML: a program package for phylogenetic analysis by maximum likelihood
inferredcites →https://doi.org/10.1093/bioinformatics/14.9.817openalex-snapshot
MODELTEST: testing the model of DNA substitution.
inferredcites →https://doi.org/10.1093/bioinformatics/17.8.754openalex-snapshot
MRBAYES: Bayesian inference of phylogenetic trees
inferredcites →https://doi.org/10.1093/bioinformatics/btg180openalex-snapshot
MrBayes 3: Bayesian phylogenetic inference under mixed models
inferredcites →https://doi.org/10.1093/bioinformatics/bti079openalex-snapshot
HyPhy: hypothesis testing using phylogenies
inferredcites →https://doi.org/10.1093/dnares/6.2.123openalex-snapshot
Isolation and Characterization of Rice MADS Box Gene Homologues and Their RFLP Mapping
inferredcites →https://doi.org/10.1093/emboj/18.19.5370openalex-snapshot
Ternary complex formation between the MADS‐box proteins SQUAMOSA, DEFICIENS and GLOBOSA is involved in the control of floral architecture in Antirrhinum majus
inferredcites →https://doi.org/10.1093/genetics/148.3.929openalex-snapshot
Likelihood Models for Detecting Positively Selected Amino Acid Sites and Applications to the HIV-1 Envelope Gene
inferredcites →https://doi.org/10.1093/genetics/149.2.765openalex-snapshot
Molecular Evolution of Genes Controlling Petal and Stamen Development: Duplication and Divergence Within the APETALA3 and PISTILLATA MADS-Box Gene Lineages
inferredcites →https://doi.org/10.1093/genetics/151.4.1531openalex-snapshot
Preservation of Duplicate Genes by Complementary, Degenerative Mutations
inferredcites →https://doi.org/10.1093/genetics/154.1.459openalex-snapshot
The Probability of Duplicate Gene Preservation by Subfunctionalization
inferredcites →https://doi.org/10.1093/genetics/166.2.1011openalex-snapshot
Patterns of Gene Duplication and Functional Evolution During the Diversification of the AGAMOUS Subfamily of MADS Box Genes in Angiosperms
inferredcites →https://doi.org/10.1093/jhered/esi033openalex-snapshot
To B or Not to B a Flower: The Role of DEFICIENS and GLOBOSA Orthologs in the Evolution of the Angiosperms
inferredcites →https://doi.org/10.1093/jxb/erg254openalex-snapshot
Isolation and characterization of a Brassica napus cDNA corresponding to a B-class floral development gene
inferredcites →https://doi.org/10.1093/jxb/erl132openalex-snapshot
Progress and challenges in studies of the evolution of development
inferredcites →https://doi.org/10.1093/molbev/msh044openalex-snapshot
Evolution of the APETALA3 and PISTILLATA Lineages of MADS-Box–Containing Genes in the Basal Angiosperms
inferredcites →https://doi.org/10.1093/molbev/msi178openalex-snapshot
Positive Selection for Indel Substitutions in the Rodent Sperm Protein Catsper1
inferredcites →https://doi.org/10.1093/molbev/msl095openalex-snapshot
Molecular and Phylogenetic Analyses of the MADS-Box Gene Family in Tomato
inferredcites →https://doi.org/10.1093/nar/24.16.3134openalex-snapshot
DNA-binding properties of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA and AGAMOUS
inferredcites →https://doi.org/10.1093/nar/gkg642openalex-snapshot
Structural diversification and neo-functionalization during floral MADS-box gene evolution by C-terminal frameshift mutations
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004148openalex-snapshot
Codon-Substitution Models for Detecting Molecular Adaptation at Individual Sites Along Specific Lineages
inferredcites →https://doi.org/10.1098/rspb.2001.1782openalex-snapshot
Evolution of the angiosperms: calibrating the family tree
inferredcites →https://doi.org/10.1101/gad.8.13.1548openalex-snapshot
Function and regulation of the Arabidopsis floral homeotic gene PISTILLATA.
inferredcites →https://doi.org/10.1104/pp.107.105346openalex-snapshot
Conserved C-Terminal Motifs of the Arabidopsis Proteins APETALA3 and PISTILLATA Are Dispensable for Floral Organ Identity Function
inferredcites →https://doi.org/10.1105/tpc.011544openalex-snapshot
Molecular and Phylogenetic Analyses of the Complete MADS-Box Transcription Factor Family in Arabidopsis
inferredcites →https://doi.org/10.1105/tpc.106.041111openalex-snapshot
Independent Ancient Polyploidy Events in the Sister Families Brassicaceae and Cleomaceae
inferredcites →https://doi.org/10.1105/tpc.106.042937openalex-snapshot
Analysis of thePetunia TM6MADS Box Gene Reveals Functional Divergence within theDEF/AP3Lineage
inferredcites →https://doi.org/10.1111/j.1365-313x.2006.02800.xopenalex-snapshot
Petaloidy and petal identity MADS‐box genes in the balsaminoid genera Impatiens and Marcgravia
inferredcites →https://doi.org/10.1126/science.290.5494.1151openalex-snapshot
The Evolutionary Fate and Consequences of Duplicate Genes
inferredcites →https://doi.org/10.1146/annurev.genet.38.072902.092831openalex-snapshot
Duplication and Divergence: The Evolution of New Genes and Old Ideas
inferredcites →https://doi.org/10.1186/1471-2148-6-30openalex-snapshot
A simplified explanation for the frameshift mutation that created a novel C-terminal motif in the APETALA3 gene lineage
inferredcites →https://doi.org/10.1534/genetics.106.057125openalex-snapshot
Reconstructing the Evolutionary History of Paralogous APETALA1/FRUITFULL-Like Genes in Grasses (Poaceae)
inferredcites →https://doi.org/10.1600/036364406775971796openalex-snapshot
Phylogenetics of Impatiens and Hydrocera (Balsaminaceae) Using Chloroplast atpB-rbcL Spacer Sequences
inferredcites →https://doi.org/10.3732/ajb.92.8.1284openalex-snapshot
Duplication of floral regulatory genes in the Lamiales

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/tax.12566zenodo-depositor-declared
Evolution of Impatiens (Balsaminaceae) in the Albertine Rift – The endemic Impatiens purpureoviolacea complex consists of ten species
inferred← citeshttps://doi.org/10.11646/phytotaxa.333.1.5zenodo-depositor-declared
A new endemic Impatiens species on Mount Gorongosa (Mozambique) demonstrates the conservation importance of montane areas in Africa
inferred← citeshttps://doi.org/10.5252/adansonia2021v43a26zenodo-depositor-declared
A new coffee species from South-West Cameroon, the principal hotspot of diversity for Coffea L. (Coffeeae, Ixoroideae, Rubiaceae) in Africa
inferred← citeshttps://doi.org/10.1002/tax.595015openalex-snapshot
New insights into the origin of two new epiphytic Impatiens species (Balsaminaceae) from West Central Africa based on molecular phylogenetic analyses
inferred← citeshttps://doi.org/10.1002/tax.612007openalex-snapshot
A total evidence approach using palynological characters to infer the complex evolutionary history of the Asian Impatiens (Balsaminaceae)
inferred← citeshttps://doi.org/10.1007/s00425-012-1684-0openalex-snapshot
Divergences of MPF2-like MADS-domain proteins have an association with the evolution of the inflated calyx syndrome within Solanaceae
inferred← citeshttps://doi.org/10.1016/j.gene.2011.04.004openalex-snapshot
The PI/GLO-like locus in orchids: Duplication and purifying selection at synonymous sites within Orchidinae (Orchidaceae)
inferred← citeshttps://doi.org/10.1016/j.ppees.2021.125590openalex-snapshot
Evolution of brood-site mimicry in Madagascan Impatiens (Balsaminaceae)
inferred← citeshttps://doi.org/10.1093/aob/mcr045openalex-snapshot
Alternate transcripts of a floral developmental regulator have both distinct and redundant functions in opium poppy
inferred← citeshttps://doi.org/10.1093/aob/mcr310openalex-snapshot
The multiple fuzzy origins of woodiness within Balsaminaceae using an integrated approach. Where do we draw the line?
inferred← citeshttps://doi.org/10.1093/aob/mcs065openalex-snapshot
Floral development of Hydrocera and Impatiens reveals evolutionary trends in the most early diverged lineages of the Balsaminaceae
inferred← citeshttps://doi.org/10.1093/aob/mcz072openalex-snapshot
Nectar traits differ between pollination syndromes in Balsaminaceae
inferred← citeshttps://doi.org/10.1093/molbev/msr169openalex-snapshot
Gene Duplication and Loss in a MADS Box Gene Transcription Factor Circuit
inferred← citeshttps://doi.org/10.1093/molbev/mss108openalex-snapshot
Pervasive Indels and Their Evolutionary Dynamics after the Fish-Specific Genome Duplication
inferred← citeshttps://doi.org/10.1111/jse.12070openalex-snapshot
Intron evolution in a phylogenetic perspective: Divergent trends in the two copies of the duplicated def gene in Impatiens L. (Balsaminaceae)
inferred← citeshttps://doi.org/10.1111/plb.12905openalex-snapshot
Breeding systems in Balsaminaceae in relation to pollen/ovule ratio, pollination syndromes, life history and climate zone
inferred← citeshttps://doi.org/10.1600/036364411x569624openalex-snapshot
Portrayal of Impatiens nzabiana (Balsaminaceae): a Morphological, Molecular and Biogeographic Study of a New Gabonese Species
inferred← citeshttps://doi.org/10.3390/ijms19010319openalex-snapshot
Comparative Genomics of the Balsaminaceae Sister Genera Hydrocera triflora and Impatiens pinfanensis
inferred← citeshttps://doi.org/10.5091/plecevo.2015.965openalex-snapshot
Morphology, molecular phylogenetics and biogeography of Impatiens akomensis (Balsaminaceae), a new species from Cameroon
inferred← citeshttps://doi.org/10.5091/plecevo.89701openalex-snapshot
Impatiens smetsiana, another example of convergent evolution of flower morphology in Impatiens
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