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Recoding of Translation in Turtle Mitochondrial Genomes: Programmed Frameshift Mutations and Evidence of a Modified Genetic Code
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Higher-order structure and thermal instability of bovine mitochondrial tRNASerUGA investigated by proton NMR spectroscopy
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The mitochondrial DNA molecule ofDrosophila yakuba: Nucleotide sequence, gene organization, and genetic code
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Single Nucleotide +1 Frameshifts in an Apparently FunctionalMitochondrial Cytochrome b Gene in Ants of the Genus Polyrhachis
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Evolution of +1 Programmed Frameshifting Signals and Frameshift-Regulating tRNAs in the Order Saccharomycetales
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Complete Mitochondrial DNA Sequence of the Eastern Oyster Crassostrea virginica
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A single UGA codon functions as a natural termination signal in the coliphage Qβ coat protein cistron
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Sequence and gene organization of the chicken mitochondrial genome
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Fitting the structurally diverse animal mitochondrial tRNAsSer to common three-dimensional constraitns
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Ribosomal frameshifting in the yeast retrotransposon Ty: tRNAs induce slippage on a 7 nucleotide minimal site
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A novel programed frameshift expresses the POL3 gene of retrotransposon Ty3 of yeast: Frameshifting without tRNA slippage
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Autoregulatory frameshifting in decoding mammalian ornithine decarboxylase antizyme
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The role of tRNA as a molecular spring in decoding, accommodation, and peptidyl transfer
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Recognition and selection of tRNA in translation
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Mitochondrial genomes: anything goes
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Molecular phylogenetics and evolution of turtles
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Post-transcriptional regulation of the steady-state levels of mitochondrial tRNAs in HeLa cells
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Secondary Structure Prediction for Aligned RNA Sequences
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Translational frameshifting: Implications for the mechanism of translational frame maintenance
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Recoding: translational bifurcations in gene expression
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Genes to cells edited by Jun-ichi Tomizawa, Blackwell Science Ltd. Institutional: £218.00 (Europe), £242.00 (Rest of World), US$382.00 (USA and Canada). Individual: £65.00 (Europe), £72.00 (Rest of World), US$114.00 (USA and Canada) ISSN 1356 9597
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Near-Cognate Peptidyl-tRNAs Promote +1 Programmed Translational Frameshifting in Yeast
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Kinetic Determinants of High-Fidelity tRNA Discrimination on the Ribosome
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Programmed +1 frameshifting stimulated by complementarity between a downstream mRNA sequence and an error-correcting region of rRNA
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Mechanism of ribosome frameshifting during translation of the genetic code
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Translation ability of mitochondrial tRNAsSer with unusual secondary structures in an in vitro translation system of bovine mitochondria
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Discovery of a spermatogenesis stage-specific ornithine decarboxylase antizyme: Antizyme 3
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Bacterial peptide chain release factors: conserved primary structure and possible frameshift regulation of release factor 2.
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Nucleotide sequence of a yeast Ty element: evidence for an unusual mechanism of gene expression.
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Translation of the sequence AGG-AGG yields 50% ribosomal frameshift.
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The gamma subunit of DNA polymerase III holoenzyme of Escherichia coli is produced by ribosomal frameshifting.
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Translational frameshifting generates the gamma subunit of DNA polymerase III holoenzyme.
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Ribosomes can slide over and beyond “hungry” codons, resuming protein chain elongation many nucleotides downstream
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Complete mitochondrial genome suggests diapsid affinities of turtles
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Interordinal Relationships of Birds and Other Reptiles Based on Whole Mitochondrial Genomes
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The Ambush Hypothesis: Hidden Stop Codons Prevent Off-Frame Gene Reading
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Evidence for Import of a Lysyl-tRNA into Marsupial Mitochondria
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Pseudogenes in metazoa: Origin and features
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Computational identification of putative programmed translational frameshift sites
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MARNA: multiple alignment and consensus structure prediction of RNAs based on sequence structure comparisons
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Programmed ribosomal frameshifting generates theEscherichia coliDNA polymerase III γ subunit from within the τ subunit reading frame
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Translational frame shifting in theEscherichia colidnaX genein vitro
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Analysis of effects of tRNA:message stability on frameshift frequency at theEscherichia coliRF2 programmed frameshift site
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The nucleotide sequence of a small (3S) seryl-tRNA (anticodon GCU) from beef heart mitochondria
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The mtDNA sequence of the ostrich and the divergence between paleognathous and neognathous birds
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An Extra Nucleotide is not Translated in Mitochondrial ND3 of Some Birds and Turtles
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Complete mitochondrial DNA sequences of the green turtle and blue- tailed mole skink: statistical evidence for archosaurian affinity of turtles
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Anoxia‐Induced Gene Expression in Turtle Heart
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Recoding: Reprogrammed Genetic Decoding
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Expression of the Rous Sarcoma Virus pol Gene by Ribosomal Frameshifting
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Sequencing of Random Euplotes crassus Macronuclear Genes Supports a High Frequency of +1 Translational Frameshifting
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rRNA-mRNA base pairing stimulates a programmed -1 ribosomal frameshift
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Ribosomal Pausing during Translation of an RNA Pseudoknot
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Special Peptidyl-tRNA Molecules Can Promote Translational Frameshifting without Slippage
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Ribosomal Pausing at a Frameshifter RNA Pseudoknot Is Sensitive to Reading Phase but Shows Little Correlation with Frameshift Efficiency
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Errors and alternatives in reading the universal genetic code
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Programmed translational frameshifting.
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Insect mitochondrial genomics: the complete mitochondrial genome sequence of the meadow spittlebugPhilaenus spumarius(Hemiptera: Auchenorrhyncha: Cercopoidae)
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RECODING: Dynamic Reprogramming of Translation
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TRANSLATIONAL ACCURACY AND THE FITNESS OF BACTERIA
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PROGRAMMED TRANSLATIONAL FRAMESHIFTING
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BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT
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inferred← citeshttps://doi.org/10.1093/nar/gkq449openalex-snapshot
Extensive frameshift at all AGG and CCC codons in the mitochondrial cytochrome c oxidase subunit 1 gene of Perkinsus marinus (Alveolata; Dinoflagellata)
inferred← citeshttps://doi.org/10.1093/nar/gkr1144openalex-snapshot
MitoZoa 2.0: a database resource and search tools for comparative and evolutionary analyses of mitochondrial genomes in Metazoa
inferred← citeshttps://doi.org/10.1093/nar/gkw530openalex-snapshot
Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use
inferred← citeshttps://doi.org/10.1098/rsob.120109openalex-snapshot
Ribosomal frameshifting used in influenza A virus expression occurs within the sequence UCC_UUU_CGU and is in the +1 direction
inferred← citeshttps://doi.org/10.1101/067736openalex-snapshot
Frameshift and wild-type proteins are highly similar because the genetic code and genomes were optimized for frameshift tolerance
inferred← citeshttps://doi.org/10.1101/2021.02.18.431795openalex-snapshot
MITOCHONDRIAL GENOME REVEALS CONTRASTING PATTERN OF ADAPTIVE SELECTION IN TURTLES AND TORTOISES
inferred← citeshttps://doi.org/10.1101/2025.10.02.679949openalex-snapshot
Ribosomal frameshifting is a carefully tuned modifier of proteins
inferred← citeshttps://doi.org/10.1111/j.1755-0998.2011.03016.xopenalex-snapshot
Molecular detection of trophic links in a complex insect host–parasitoid food web
inferred← citeshttps://doi.org/10.1111/j.1755-0998.2011.03032.xopenalex-snapshot
Comparing and combining distance‐based and character‐based approaches for barcoding turtles
inferred← citeshttps://doi.org/10.1111/j.1755-0998.2012.03143.xopenalex-snapshot
Utility of the DNA barcoding gene fragment for parasitic wasp phylogeny (Hymenoptera: Ichneumonoidea): data release and new measure of taxonomic congruence
inferred← citeshttps://doi.org/10.1111/jeb.12031openalex-snapshot
The determinants of the molecular substitution process in turtles
inferred← citeshttps://doi.org/10.1111/zsc.12454openalex-snapshot
Phylogeny of Veneridae (Bivalvia) based on mitochondrial genomes
inferred← citeshttps://doi.org/10.11144/javeriana.sc23-3.ccclopenalex-snapshot
Complete mitochondrial genome of the nesting Colombian Caribbean loggerhead turtle: first approach of tRNAs and phylogenetic analysis
inferred← citeshttps://doi.org/10.1126/science.1180674openalex-snapshot
Hungry Codons Promote Frameshifting in Human Mitochondrial Ribosomes
inferred← citeshttps://doi.org/10.1186/s12864-022-08435-6openalex-snapshot
Frameshift and wild-type proteins are often highly similar because the genetic code and genomes were optimized for frameshift tolerance
inferred← citeshttps://doi.org/10.13130/borsani-massimiliano_phd2013-05-31openalex-snapshot
BIOINFORMATICS APPROACHES TO MALDI-TOF MASS SPECTROMETRY DATA ANALYSIS
inferred← citeshttps://doi.org/10.1371/journal.pone.0019933openalex-snapshot
Spliced Leader RNAs, Mitochondrial Gene Frameshifts and Multi-Protein Phylogeny Expand Support for the Genus Perkinsus as a Unique Group of Alveolates
inferred← citeshttps://doi.org/10.1371/journal.pone.0136297openalex-snapshot
The Mitochondrial Genomes of Aquila fasciata and Buteo lagopus (Aves, Accipitriformes): Sequence, Structure and Phylogenetic Analyses
inferred← citeshttps://doi.org/10.1371/journal.pone.0181649openalex-snapshot
A novel mitochondrial genome of Arborophila and new insight into Arborophila evolutionary history
inferred← citeshttps://doi.org/10.14288/1.0072226openalex-snapshot
How the turtle makes its palate without palatal shelves
inferred← citeshttps://doi.org/10.1590/s1415-4757382220140203openalex-snapshot
The complete mitochondrial genome sequence of the little egret (Egretta garzetta)
inferred← citeshttps://doi.org/10.21203/rs.3.rs-3952449/v1openalex-snapshot
Precise and adaptable knock-out generation in wheat thanks to a multi-stop cassette
inferred← citeshttps://doi.org/10.3109/19401736.2011.637109openalex-snapshot
The complete mitochondrial genome of the loggerhead turtleCaretta caretta(Testudines: Cheloniidae): Genome description and phylogenetic considerations
inferred← citeshttps://doi.org/10.3109/19401736.2013.873900openalex-snapshot
The complete mitochondrial genome of western painted turtle, Chrysemys picta bellii ( Chrysemys , Emydidae)
inferred← citeshttps://doi.org/10.3109/19401736.2014.971271openalex-snapshot
The complete mitogenome of the Black-tailed gull Larus crassirostris (Charadriiformes: Laridae)
inferred← citeshttps://doi.org/10.3109/19401736.2014.984178openalex-snapshot
Complete mitochondrial genomes of the yellow-bellied slider turtle Trachemys scripta scripta and anoxia tolerant red-eared slider Trachemys scripta elegans
inferred← citeshttps://doi.org/10.3109/19401736.2015.1089536openalex-snapshot
Mitochondrial genome diversity among six laboratory zebrafish ( Danio rerio ) strains
inferred← citeshttps://doi.org/10.31274/etd-20210609-54openalex-snapshot
Investigating monarch butterfly (Danaus plexippus) movement ecology to inform conservation strategies
inferred← citeshttps://doi.org/10.3390/genes10070487openalex-snapshot
The Complete Mitochondrial Genome of Platysternon megacephalum peguense and Molecular Phylogenetic Analysis
inferred← citeshttps://doi.org/10.3390/genes16091030openalex-snapshot
Assembly of Mitochondrial Genome of Oriental Plover (Anarhynchus veredus) and Phylogenetic Relationships Within the Charadriidae
inferred← citeshttps://doi.org/10.3897/zookeys.1110.85491openalex-snapshot
More discussion of minimalist species descriptions and clarifying some misconceptions contained in Meier et al. 2021
inferred← citeshttps://doi.org/10.4172/2332-0672.1000108openalex-snapshot
Mitochondrial Genomes and Frameshift Mutations: Hidden Stop Codons, their Functional Consequences and Disease Associations
inferred← citeshttps://doi.org/10.4238/vol9-2gmr820openalex-snapshot
Complete mitochondrial genome of Cabot’s tragopan, Tragopan caboti (Galliformes: Phasianidae)
inferred← citeshttps://doi.org/10.5772/intechopen.80871openalex-snapshot
Directed Mutations Recode Mitochondrial Genes: From Regular to Stopless Genetic Codes
inferred← citeshttps://doi.org/10.6084/m9.figshare.19976780openalex-snapshot
Additional file 1 of Frameshift and wild-type proteins are often highly similar because the genetic code and genomes were optimized for frameshift tolerance
inferred← citeshttps://doi.org/10.6084/m9.figshare.19976789openalex-snapshot
Additional file 2 of Frameshift and wild-type proteins are often highly similar because the genetic code and genomes were optimized for frameshift tolerance
inferred← citeshttps://doi.org/10.6084/m9.figshare.19976795openalex-snapshot
Additional file 3 of Frameshift and wild-type proteins are often highly similar because the genetic code and genomes were optimized for frameshift tolerance
inferred← citeshttps://doi.org/10.6084/m9.figshare.19976801openalex-snapshot
Additional file 4 of Frameshift and wild-type proteins are often highly similar because the genetic code and genomes were optimized for frameshift tolerance
inferred← citeshttps://doi.org/10.6084/m9.figshare.19976804openalex-snapshot
Additional file 5 of Frameshift and wild-type proteins are often highly similar because the genetic code and genomes were optimized for frameshift tolerance
inferred← citeshttps://doi.org/10.70675/28835658ze3c8z4a59z94bcz6db7a7e22084openalex-snapshot
Les causes des variations du taux d’évolution moléculaire entre lignées
inferred← citeshttps://doi.org/10.70675/eb2c4803z6bfez4172zb1d3z782076b3a0a5openalex-snapshot
Exploration de mécanismes de transcription et de traduction non-canoniques
inferred← citeshttps://doi.org/10.7287/peerj.preprints.806v1openalex-snapshot
The shiftability of protein coding genes: the genetic code was optimized for frameshift tolerating
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