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Comparative mitogenomic analysis of the superfamily Tellinoidea (Mollusca: Bivalvia): Insights into the evolution of the gene rearrangements

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/bf01215182openalex-snapshot
Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes
inferredcites →https://doi.org/10.1007/s00239-003-2559-6openalex-snapshot
Complete mtDNA of Ciona intestinalis Reveals Extensive Gene Rearrangement and the Presence of an atp8 and an Extra trnM Gene in Ascidians
inferredcites →https://doi.org/10.1007/s00239-005-0246-5openalex-snapshot
The Relationship Between the Rate of Molecular Evolution and the Rate of Genome Rearrangement in Animal Mitochondrial Genomes
inferredcites →https://doi.org/10.1007/s00239-007-9016-xopenalex-snapshot
Complete Mitochondrial DNA Sequence of the Scallop Placopecten magellanicus: Evidence of Transposition Leading to an Uncharacteristically Large Mitochondrial Genome
inferredcites →https://doi.org/10.1007/s10126-005-0004-0openalex-snapshot
Complete Mitochondrial DNA Sequence of the Eastern Oyster Crassostrea virginica
inferredcites →https://doi.org/10.1007/s11033-010-0449-8openalex-snapshot
The complete mitochondrial genome of the hard clam Meretrix meretrix
inferredcites →https://doi.org/10.1016/j.cbd.2010.07.003openalex-snapshot
Complete mtDNA of Meretrix lusoria (Bivalvia: Veneridae) reveals the presence of an atp8 gene, length variation and heteroplasmy in the control region
inferredcites →https://doi.org/10.1016/j.cbd.2012.12.003openalex-snapshot
Complete mitochondrial DNA sequence of the ark shell Scapharca broughtonii: An ultra-large metazoan mitochondrial genome
inferredcites →https://doi.org/10.1016/j.gene.2011.12.002openalex-snapshot
Comparative studies of the complete mitochondrial genomes of four Paphia clams and reconsideration of subgenus Neotapes (Bivalvia: Veneridae)
inferredcites →https://doi.org/10.1016/j.margen.2010.01.001openalex-snapshot
Characterization of a mitochondrial ORF from the gender-associated mtDNAs of Mytilus spp. (Bivalvia: Mytilidae): Identification of the “missing” ATPase 8 gene
inferredcites →https://doi.org/10.1016/j.margen.2016.09.003openalex-snapshot
Updated mitochondrial phylogeny of Pteriomorph and Heterodont Bivalvia, including deep-sea chemosymbiotic Bathymodiolus mussels, vesicomyid clams and the thyasirid clam Conchocele cf. bisecta
inferredcites →https://doi.org/10.1016/j.ympev.2005.10.018openalex-snapshot
Extensive mitochondrial gene arrangements in coleoid Cephalopoda and their phylogenetic implications
inferredcites →https://doi.org/10.1016/j.ympev.2010.05.029openalex-snapshot
Comparison of seven Crassostrea mitogenomes and phylogenetic analyses
inferredcites →https://doi.org/10.1016/j.ympev.2017.10.009openalex-snapshot
Multiple reversals of strand asymmetry in molluscs mitochondrial genomes, and consequences for phylogenetic inferences
inferredcites →https://doi.org/10.1016/s0074-7696(08)62066-5openalex-snapshot
Animal Mitochondrial DNA: Structure and Evolution
inferredcites →https://doi.org/10.1016/s0305-1978(02)00252-1openalex-snapshot
Genetic and morphological variation in four populations of the surf clam Donax serra (Röding) from southern African sandy beaches
inferredcites →https://doi.org/10.1038/369684a0openalex-snapshot
Long PCR
inferredcites →https://doi.org/10.1038/hdy.2008.62openalex-snapshot
Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species
inferredcites →https://doi.org/10.1074/jbc.m300967200openalex-snapshot
The Molecular Neighborhood of Subunit 8 of Yeast Mitochondrial F1F0-ATP Synthase Probed by Cysteine Scanning Mutagenesis and Chemical Modification
inferredcites →https://doi.org/10.1080/10635150500433722openalex-snapshot
Computing Bayes Factors Using Thermodynamic Integration
inferredcites →https://doi.org/10.1080/10635150701472164openalex-snapshot
Improvement of Phylogenies after Removing Divergent and Ambiguously Aligned Blocks from Protein Sequence Alignments
inferredcites →https://doi.org/10.1080/15216549600201261openalex-snapshot
Non‐functional variants of yeast mitochondrial ATP synthase subunit 8 that assemble into the complex
inferredcites →https://doi.org/10.1080/19401730902964425openalex-snapshot
The complete mitochondrial genome of the clamMeretrix petechialis(Mollusca: Bivalvia: Veneridae)
inferredcites →https://doi.org/10.1093/bioinformatics/btm468openalex-snapshot
CREx: inferring genomic rearrangements based on common intervals
inferredcites →https://doi.org/10.1093/bioinformatics/btm573openalex-snapshot
ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences
inferredcites →https://doi.org/10.1093/gbe/evw187openalex-snapshot
Comparative Large-Scale Mitogenomics Evidences Clade-Specific Evolutionary Trends in Mitochondrial DNAs of Bivalvia
inferredcites →https://doi.org/10.1093/icb/icm045openalex-snapshot
Key transitions in animal evolution: a mitochondrial DNA perspective
inferredcites →https://doi.org/10.1093/molbev/msh112openalex-snapshot
A Bayesian Mixture Model for Across-Site Heterogeneities in the Amino-Acid Replacement Process
inferredcites →https://doi.org/10.1093/molbev/mss020openalex-snapshot
PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses
inferredcites →https://doi.org/10.1093/molbev/mst197openalex-snapshot
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
inferredcites →https://doi.org/10.1093/molbev/msx248openalex-snapshot
DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets
inferredcites →https://doi.org/10.1093/nar/27.2.573openalex-snapshot
Tandem repeats finder: a program to analyze DNA sequences
inferredcites →https://doi.org/10.1093/nar/27.8.1767openalex-snapshot
Animal mitochondrial genomes
inferredcites →https://doi.org/10.1093/nar/gkg077openalex-snapshot
OGRe: a relational database for comparative analysis of mitochondrial genomes
inferredcites →https://doi.org/10.1093/nar/gkg595openalex-snapshot
Mfold web server for nucleic acid folding and hybridization prediction
inferredcites →https://doi.org/10.1093/nar/gki198openalex-snapshot
MAFFT version 5: improvement in accuracy of multiple sequence alignment
inferredcites →https://doi.org/10.1093/nar/gkv997openalex-snapshot
Acentric chromosome ends are prone to fusion with functional chromosome ends through a homology-directed rearrangement
inferredcites →https://doi.org/10.1093/nar/gkw256openalex-snapshot
W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis
inferredcites →https://doi.org/10.1093/sysbio/syt022openalex-snapshot
PhyloBayes MPI: Phylogenetic Reconstruction with Infinite Mixtures of Profiles in a Parallel Environment
inferredcites →https://doi.org/10.1111/j.1463-6409.2007.00299.xopenalex-snapshot
A molecular phylogeny of heterodont bivalves (Mollusca: Bivalvia: Heterodonta): new analyses of 18S and 28S rRNA genes
inferredcites →https://doi.org/10.1186/1471-2148-7-s1-s4openalex-snapshot
Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model
inferredcites →https://doi.org/10.1186/1742-9994-3-13openalex-snapshot
The complete sequences and gene organisation of the mitochondrial genomes of the heterodont bivalves Acanthocardia tuberculata and Hiatella arctica – and the first record for a putative Atpase subunit 8 gene in marine bivalves
inferredcites →https://doi.org/10.1186/s12862-014-0259-zopenalex-snapshot
Mitochondrial genomes of the Baltic clam Macoma balthica(Bivalvia: Tellinidae): setting the stage for studying mito-nuclear incompatibilities
inferredcites →https://doi.org/10.1371/journal.pone.0032353openalex-snapshot
The Complete Mitochondrial Genomes of Six Heterodont Bivalves (Tellinoidea and Solenoidea): Variable Gene Arrangements and Phylogenetic Implications
inferredcites →https://doi.org/10.1371/journal.pone.0184464openalex-snapshot
First complete female mitochondrial genome in four bivalve species genus Donax and their phylogenetic relationships within the Veneroida order
inferredcites →https://doi.org/10.1534/genetics.105.046243openalex-snapshot
Replication Origin of Mitochondrial DNA in Insects
inferredcites →https://doi.org/10.3109/19401736.2013.836515openalex-snapshot
Complete mitochondrial genome of the Antarctic soft-shelled clam,Laternula elliptica(Bivalvia; Laternulidae)
inferredcites →https://doi.org/10.3109/19401736.2013.865174openalex-snapshot
The complete mitochondrial genome ofScapharca kagoshimensis(Bivalvia: Arcidae)
inferredcites →https://doi.org/10.5281/zenodo.15145663openalex-snapshot
Table 1 in A new Gammarus species from Xinjiang Uygur Autonomous Region (China) with a key to Xinjiang freshwater gammarids (Crustacea, Amphipoda, Gammaridae)

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s13127-022-00561-zzenodo-depositor-declared
Cladistic analysis of the transisthmian genus Eurytellina (Bivalvia: Tellinoidea) based on morphological and morphometric data
inferred← citeshttps://doi.org/10.1002/jmor.21762openalex-snapshot
Comparative anatomy of siphons in tellinoidean clams (Bivalvia, Tellinoidea)
inferred← citeshttps://doi.org/10.1007/s00343-023-3059-8openalex-snapshot
Mitochondrial genomes of Tapes dorsatus and Cardita variegata: insights into Heteroconchia phylogeny
inferred← citeshttps://doi.org/10.1007/s42995-023-00178-xopenalex-snapshot
Phylogenomic resolution of Imparidentia (Mollusca: Bivalvia) diversification through mitochondrial genomes
inferred← citeshttps://doi.org/10.1016/j.cbd.2024.101361openalex-snapshot
Comparative mitogenomic analyses of the infraclass Pteriomorphia (Mollusca: Bivalvia) provides novel insights into gene rearrangement and phylogeny
inferred← citeshttps://doi.org/10.1038/s41598-024-63764-8openalex-snapshot
The absence of canonical respiratory complex I subunits in male-type mitogenomes of three Donax species
inferred← citeshttps://doi.org/10.1093/icb/icab057openalex-snapshot
Bivalve Molluscs as Model Systems for Studying Mitochondrial Biology
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlaf159openalex-snapshot
Ultraconserved element-based phylogenomics and siphonal traits illuminate the evolution of tellinoidean clams (Mollusca: Bivalvia: Tellinoidea)
inferred← citeshttps://doi.org/10.3389/fmars.2022.930910openalex-snapshot
Phylogeny of Strombidae (Gastropoda) Based on Mitochondrial Genomes
inferred← citeshttps://doi.org/10.3390/d17050303openalex-snapshot
Denser Mitogenomic Sampling for Exploring the Phylogeny of Tellinoidea (Mollusca: Bivalvia)
inferred← citeshttps://doi.org/10.3390/fishes8100528openalex-snapshot
Mitogenomic Analysis of Pterioidea (Bivalvia: Pteriomorphia): Insights into the Evolution of the Gene Rearrangements
inferred← citeshttps://doi.org/10.65658/j.hndk.2025042401openalex-snapshot
Research progresses on the species diversity and systematic taxonomy of marine mollusca in Hainan Province
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