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Foxa2 and H2A.Z Mediate Nucleosome Depletion during Embryonic Stem Cell Differentiation
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/stem.147openalex-snapshot
Generation of Monoclonal Antibodies Specific for Cell Surface Molecules Expressed on Early Mouse Endoderm
inferredcites →https://doi.org/10.1006/dbio.1999.9228openalex-snapshot
Developmental Competence of the Gut Endoderm: Genetic Potentiation by GATA and HNF3/Fork Head Proteins
inferredcites →https://doi.org/10.1016/0092-8674(93)80079-topenalex-snapshot
An active tissue-specific enhancer and bound transcription factors existing in a precisely positioned nucleosomal array
inferredcites →https://doi.org/10.1016/j.cell.2005.10.002openalex-snapshot
Histone Variant H2A.Z Marks the 5′ Ends of Both Active and Inactive Genes in Euchromatin
inferredcites →https://doi.org/10.1016/j.cell.2006.02.043openalex-snapshot
Control of Developmental Regulators by Polycomb in Human Embryonic Stem Cells
inferredcites →https://doi.org/10.1016/j.cell.2008.02.022openalex-snapshot
Dynamic Regulation of Nucleosome Positioning in the Human Genome
inferredcites →https://doi.org/10.1016/j.cell.2008.07.020openalex-snapshot
Connecting microRNA Genes to the Core Transcriptional Regulatory Circuitry of Embryonic Stem Cells
inferredcites →https://doi.org/10.1016/j.devcel.2009.02.010openalex-snapshot
Establishment of Intestinal Identity and Epithelial-Mesenchymal Signaling by Cdx2
inferredcites →https://doi.org/10.1016/j.exphem.2005.06.009openalex-snapshot
Germ layer induction from embryonic stem cells
inferredcites →https://doi.org/10.1016/j.molcel.2010.05.004openalex-snapshot
Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
inferredcites →https://doi.org/10.1016/j.stem.2007.10.011openalex-snapshot
Wnt, Activin, and BMP Signaling Regulate Distinct Stages in the Developmental Pathway from Embryonic Stem Cells to Blood
inferredcites →https://doi.org/10.1038/nature03649openalex-snapshot
The initiation of liver development is dependent on Foxa transcription factors
inferredcites →https://doi.org/10.1038/nature06008openalex-snapshot
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
inferredcites →https://doi.org/10.1038/nature06929openalex-snapshot
Nucleosome organization in the Drosophila genome
inferredcites →https://doi.org/10.1038/nature07107openalex-snapshot
Genome-scale DNA methylation maps of pluripotent and differentiated cells
inferredcites →https://doi.org/10.1038/nature08911openalex-snapshot
Chromatin remodelling during development
inferredcites →https://doi.org/10.1038/nature09147openalex-snapshot
Relationship between nucleosome positioning and DNA methylation
inferredcites →https://doi.org/10.1038/nbt1258openalex-snapshot
BMP-4 is required for hepatic specification of mouse embryonic stem cell–derived definitive endoderm
inferredcites →https://doi.org/10.1038/nrg2522openalex-snapshot
Nucleosome positioning and gene regulation: advances through genomics
inferredcites →https://doi.org/10.1038/nsmb.2060openalex-snapshot
The nucleosome map of the mammalian liver
inferredcites →https://doi.org/10.1073/pnas.0603916103openalex-snapshot
Wnt and TGF-β signaling are required for the induction of an in vitro model of primitive streak formation using embryonic stem cells
inferredcites →https://doi.org/10.1093/bioinformatics/btq033openalex-snapshot
BEDTools: a flexible suite of utilities for comparing genomic features
inferredcites →https://doi.org/10.1093/nar/gkp536openalex-snapshot
Extracting transcription factor targets from ChIP-Seq data
inferredcites →https://doi.org/10.1101/gr.076463.108openalex-snapshot
A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning
inferredcites →https://doi.org/10.1101/gr.092643.109openalex-snapshot
High-resolution analysis of epigenetic changes associated with X inactivation
inferredcites →https://doi.org/10.1126/science.1090701openalex-snapshot
ATP-Driven Exchange of Histone H2AZ Variant Catalyzed by SWR1 Chromatin Remodeling Complex
inferredcites →https://doi.org/10.1128/mcb.22.3.856-865.2002openalex-snapshot
Retinoblastoma Protein Transcriptional Repression through Histone Deacetylation of a Single Nucleosome
inferredcites →https://doi.org/10.1128/mcb.25.16.7069-7077.2005openalex-snapshot
Transcriptional Networks in the Liver: Hepatocyte Nuclear Factor 6 Function Is Largely Independent of Foxa2
inferredcites →https://doi.org/10.1146/annurev.biochem.77.062706.153223openalex-snapshot
The Biology of Chromatin Remodeling Complexes
inferredcites →https://doi.org/10.1172/jci3135openalex-snapshot
CCAAT enhancer- binding protein beta is required for normal hepatocyte proliferation in mice after partial hepatectomy.
inferredcites →https://doi.org/10.1371/journal.pbio.0060065openalex-snapshot
Dynamic Remodeling of Individual Nucleosomes Across a Eukaryotic Genome in Response to Transcriptional Perturbation
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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inferred← citeshttps://doi.org/10.1002/advs.202510641openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/stem.2294openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-3-319-27186-6_5openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s00281-018-0727-4openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s00408-014-9620-7openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s00441-014-1862-4openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s40610-015-0005-3openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-12-802389-1.00020-4openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-443-19001-8.00025-8openalex-snapshot
Chromatin remodeling and epigenetic reprogramming in chronic disease and cancer in the liver and pancreas
inferred← citeshttps://doi.org/10.1016/bs.ctdb.2018.12.003openalex-snapshot
Molecular regulation of mammalian hepatic architecture
inferred← citeshttps://doi.org/10.1016/bs.ctdb.2019.11.002openalex-snapshot
Chromatin regulation and dynamics in stem cells
inferred← citeshttps://doi.org/10.1016/j.bbagrm.2015.10.008openalex-snapshot
Linker histones: History and current perspectives
inferred← citeshttps://doi.org/10.1016/j.bbagrm.2015.10.016openalex-snapshot
Linker histones in hormonal gene regulation
inferred← citeshttps://doi.org/10.1016/j.bbagrm.2018.03.002openalex-snapshot
Transcriptional regulation mediated by H2A.Z via ANP32e-dependent inhibition of protein phosphatase 2A
inferred← citeshttps://doi.org/10.1016/j.bbagrm.2019.194443openalex-snapshot
Sequence and chromatin determinants of transcription factor binding and the establishment of cell type-specific binding patterns
inferred← citeshttps://doi.org/10.1016/j.ccr.2014.07.028openalex-snapshot
Gene Body Methylation Can Alter Gene Expression and Is a Therapeutic Target in Cancer
inferred← citeshttps://doi.org/10.1016/j.cell.2013.04.037openalex-snapshot
Transcriptional and Epigenetic Dynamics during Specification of Human Embryonic Stem Cells
inferred← citeshttps://doi.org/10.1016/j.cell.2013.08.016openalex-snapshot
Structure and Subunit Topology of the INO80 Chromatin Remodeler and Its Nucleosome Complex
inferred← citeshttps://doi.org/10.1016/j.cell.2016.07.012openalex-snapshot
The Genetics of Transcription Factor DNA Binding Variation
inferred← citeshttps://doi.org/10.1016/j.cell.2019.03.009openalex-snapshot
Promoter-Intrinsic and Local Chromatin Features Determine Gene Repression in LADs
inferred← citeshttps://doi.org/10.1016/j.celrep.2015.04.022openalex-snapshot
Composite macroH2A/NRF-1 Nucleosomes Suppress Noise and Generate Robustness in Gene Expression
inferred← citeshttps://doi.org/10.1016/j.celrep.2015.08.071openalex-snapshot
Regulation of Nucleosome Architecture and Factor Binding Revealed by Nuclease Footprinting of the ESC Genome
inferred← citeshttps://doi.org/10.1016/j.celrep.2015.12.100openalex-snapshot
H2A.Z.1 Monoubiquitylation Antagonizes BRD2 to Maintain Poised Chromatin in ESCs
inferred← citeshttps://doi.org/10.1016/j.celrep.2018.02.019openalex-snapshot
Nap1l1 Controls Embryonic Neural Progenitor Cell Proliferation and Differentiation in the Developing Brain
inferred← citeshttps://doi.org/10.1016/j.celrep.2019.03.076openalex-snapshot
Single-Cell RNA-Sequencing-Based CRISPRi Screening Resolves Molecular Drivers of Early Human Endoderm Development
inferred← citeshttps://doi.org/10.1016/j.celrep.2019.06.034openalex-snapshot
FOXA2 Is Required for Enhancer Priming during Pancreatic Differentiation
inferred← citeshttps://doi.org/10.1016/j.celrep.2023.113177openalex-snapshot
TOBF1 modulates mouse embryonic stem cell fate through regulating alternative splicing of pluripotency genes
inferred← citeshttps://doi.org/10.1016/j.devcel.2013.02.005openalex-snapshot
Pioneering Barren Land: Mitotic Bookmarking by Transcription Factors
inferred← citeshttps://doi.org/10.1016/j.devcel.2014.05.024openalex-snapshot
High-Resolution Mapping of Chromatin Packaging in Mouse Embryonic Stem Cells and Sperm
inferred← citeshttps://doi.org/10.1016/j.devcel.2016.02.001openalex-snapshot
Nuclear Condensation during Mouse Erythropoiesis Requires Caspase-3-Mediated Nuclear Opening
inferred← citeshttps://doi.org/10.1016/j.devcel.2021.02.005openalex-snapshot
FoxA-dependent demethylation of DNA initiates epigenetic memory of cellular identity
inferred← citeshttps://doi.org/10.1016/j.diabres.2016.11.009openalex-snapshot
Epigenetic control of β-cell function and failure
inferred← citeshttps://doi.org/10.1016/j.gde.2013.07.002openalex-snapshot
Chromatin modulators as facilitating factors in cellular reprogramming
inferred← citeshttps://doi.org/10.1016/j.gde.2015.12.003openalex-snapshot
Pioneer transcription factors, chromatin dynamics, and cell fate control
inferred← citeshttps://doi.org/10.1016/j.gendis.2025.101972openalex-snapshot
FOXA2 in islet biology: Orchestrating pancreatic development and glucose homeostasis
inferred← citeshttps://doi.org/10.1016/j.gpb.2018.12.009openalex-snapshot
H3K27me3 Signal in the Cis Regulatory Elements Reveals the Differentiation Potential of Progenitors during Drosophila Neuroglial Development
inferred← citeshttps://doi.org/10.1016/j.jgg.2013.05.001openalex-snapshot
Histone Variants in Development and Diseases
inferred← citeshttps://doi.org/10.1016/j.leukres.2016.09.018openalex-snapshot
Possible role of intragenic DNA hypermethylation in gene silencing of the tumor suppressor gene NR4A3 in acute myeloid leukemia
inferred← citeshttps://doi.org/10.1016/j.mce.2013.04.026openalex-snapshot
Chromatin and epigenetic determinants of estrogen receptor alpha (ESR1) signaling
inferred← citeshttps://doi.org/10.1016/j.mod.2020.103647openalex-snapshot
Pancreas development and the Polycomb group protein complexes
inferred← citeshttps://doi.org/10.1016/j.molcel.2013.01.038openalex-snapshot
Modification of Enhancer Chromatin: What, How, and Why?
inferred← citeshttps://doi.org/10.1016/j.molcel.2016.08.034openalex-snapshot
Monoubiquitination of Histone H2B Blocks Eviction of Histone Variant H2A.Z from Inducible Enhancers
inferred← citeshttps://doi.org/10.1016/j.molcel.2017.01.017openalex-snapshot
Catalytic-Independent Functions of PARP-1 Determine Sox2 Pioneer Activity at Intractable Genomic Loci
inferred← citeshttps://doi.org/10.1016/j.molcel.2026.05.020openalex-snapshot
Distinct associations of pioneer factor Ascl1-E12a with nucleosomes drive changes in cell fate
inferred← citeshttps://doi.org/10.1016/j.molmet.2021.101291openalex-snapshot
Pioneer factor Foxa2 enables ligand-dependent activation of type II nuclear receptors FXR and LXRα
inferred← citeshttps://doi.org/10.1016/j.pharmthera.2017.08.003openalex-snapshot
Members of FOX family could be drug targets of cancers
inferred← citeshttps://doi.org/10.1016/j.scr.2013.11.004openalex-snapshot
Post-translational modifications of the histone variant h2az
inferred← citeshttps://doi.org/10.1016/j.stem.2013.01.012openalex-snapshot
H2A.Z Sets the Stage in ESCs
inferred← citeshttps://doi.org/10.1016/j.stem.2013.12.007openalex-snapshot
Efficient Endoderm Induction from Human Pluripotent Stem Cells by Logically Directing Signals Controlling Lineage Bifurcations
inferred← citeshttps://doi.org/10.1016/j.stem.2015.02.013openalex-snapshot
Epigenetic Priming of Enhancers Predicts Developmental Competence of hESC-Derived Endodermal Lineage Intermediates
inferred← citeshttps://doi.org/10.1016/j.stem.2015.03.006openalex-snapshot
An Epigenomic Road Map for Endoderm Development
inferred← citeshttps://doi.org/10.1016/j.stem.2015.10.003openalex-snapshot
FOXD3 Regulates Pluripotent Stem Cell Potential by Simultaneously Initiating and Repressing Enhancer Activity
inferred← citeshttps://doi.org/10.1016/j.tcb.2021.09.002openalex-snapshot
Metabolic and epigenetic regulation of endoderm differentiation
inferred← citeshttps://doi.org/10.1016/j.tibs.2014.10.004openalex-snapshot
Transcribing through the nucleosome
inferred← citeshttps://doi.org/10.1016/j.tibs.2015.11.005openalex-snapshot
Polycomb in Transcriptional Phase Transition of Developmental Genes
inferred← citeshttps://doi.org/10.1016/j.tig.2015.02.008openalex-snapshot
Epigenetic modifications and long noncoding RNAs influence pancreas development and function
inferred← citeshttps://doi.org/10.1016/j.tig.2015.07.005openalex-snapshot
Histone variants and cellular plasticity
inferred← citeshttps://doi.org/10.1016/j.tig.2021.10.003openalex-snapshot
The H2A.Z-nucleosome code in mammals: emerging functions
inferred← citeshttps://doi.org/10.1016/j.tiv.2016.04.012openalex-snapshot
Epithelial-mesenchymal transition and FOXA genes during tobacco smoke carcinogen induced transformation of human bronchial epithelial cells
inferred← citeshttps://doi.org/10.1021/jacs.9b07576openalex-snapshot
Chromatin Structure and the Pioneering Transcription Factor FOXA1 Regulate TDG-Mediated Removal of 5-Formylcytosine from DNA
inferred← citeshttps://doi.org/10.1038/cdd.2016.135openalex-snapshot
Chromatin remodeling during in vivo neural stem cells differentiating to neurons in early Drosophila embryos
inferred← citeshttps://doi.org/10.1038/cdd.2017.62openalex-snapshot
Nucleosome eviction along with H3K9ac deposition enhances Sox2 binding during human neuroectodermal commitment
inferred← citeshttps://doi.org/10.1038/cr.2013.113openalex-snapshot
The mINO80 chromatin remodeling complex is required for efficient telomere replication and maintenance of genome stability
inferred← citeshttps://doi.org/10.1038/cr.2016.15openalex-snapshot
Comprehensive profiling reveals mechanisms of SOX2-mediated cell fate specification in human ESCs and NPCs
inferred← citeshttps://doi.org/10.1038/cr.2017.112openalex-snapshot
Genome-wide identification of histone H2A and histone variant H2A.Z-interacting proteins by bPPI-seq
inferred← citeshttps://doi.org/10.1038/nbt.3383openalex-snapshot
Single-cell ChIP-seq reveals cell subpopulations defined by chromatin state
inferred← citeshttps://doi.org/10.1038/nbt.4138openalex-snapshot
A protein activity assay to measure global transcription factor activity reveals determinants of chromatin accessibility
inferred← citeshttps://doi.org/10.1038/ncomms5719openalex-snapshot
Nucleosomal occupancy changes locally over key regulatory regions during cell differentiation and reprogramming
inferred← citeshttps://doi.org/10.1038/nrc3539openalex-snapshot
Forkhead box proteins: tuning forks for transcriptional harmony
inferred← citeshttps://doi.org/10.1038/s41420-022-01030-4openalex-snapshot
Hyperglycemia induces gastric carcinoma proliferation and migration via the Pin1/BRD4 pathway
inferred← citeshttps://doi.org/10.1038/s41421-018-0027-0openalex-snapshot
Gas41 links histone acetylation to H2A.Z deposition and maintenance of embryonic stem cell identity
inferred← citeshttps://doi.org/10.1038/s41438-021-00520-3openalex-snapshot
The histone variant Sl_H2A.Z regulates carotenoid biosynthesis and gene expression during tomato fruit ripening
inferred← citeshttps://doi.org/10.1038/s41467-020-18821-xopenalex-snapshot
Genome-wide chromatin accessibility is restricted by ANP32E
inferred← citeshttps://doi.org/10.1038/s41467-022-31611-xopenalex-snapshot
TET1 dioxygenase is required for FOXA2-associated chromatin remodeling in pancreatic beta-cell differentiation
inferred← citeshttps://doi.org/10.1038/s41467-022-32566-9openalex-snapshot
KLF4 recruits SWI/SNF to increase chromatin accessibility and reprogram the endothelial enhancer landscape under laminar shear stress
inferred← citeshttps://doi.org/10.1038/s41467-023-41964-6openalex-snapshot
Regulation of CTCF loop formation during pancreatic cell differentiation
inferred← citeshttps://doi.org/10.1038/s41467-025-66597-9openalex-snapshot
Identification of epigenetic regulators of fibrotic transformation in cardiac fibroblasts through bulk and single-cell CRISPR screens
inferred← citeshttps://doi.org/10.1038/s41514-017-0006-yopenalex-snapshot
Opposing activities of oncogenic MIR17HG and tumor suppressive MIR100HG clusters and their gene targets regulate replicative senescence in human adult stem cells
inferred← citeshttps://doi.org/10.1038/s41580-020-0262-8openalex-snapshot
The roles of histone variants in fine-tuning chromatin organization and function
inferred← citeshttps://doi.org/10.1038/s41589-019-0354-yopenalex-snapshot
DNA repair complex licenses acetylation of H2A.Z.1 by KAT2A during transcription
inferred← citeshttps://doi.org/10.1038/s41598-018-26149-2openalex-snapshot
Regulation of chromatin states and gene expression during HSN neuronal maturation is mediated by EOR-1/PLZF, MAU-2/cohesin loader, and SWI/SNF complex
inferred← citeshttps://doi.org/10.1038/srep17691openalex-snapshot
Dynamically reorganized chromatin is the key for the reprogramming of somatic cells to pluripotent cells
inferred← citeshttps://doi.org/10.1038/srep33422openalex-snapshot
Chromatin remodeling during the in vivo glial differentiation in early Drosophila embryos
inferred← citeshttps://doi.org/10.1039/c8lc00599kopenalex-snapshot
A droplet microfluidic platform for efficient enzymatic chromatin digestion enables robust determination of nucleosome positioning
inferred← citeshttps://doi.org/10.1039/d0fo00124dopenalex-snapshot
Secoisolariciresinol diglucoside alleviates hepatic lipid metabolic misalignment involving the endoplasmic reticulum–mitochondrial axis
inferred← citeshttps://doi.org/10.1073/pnas.1412802111openalex-snapshot
Threonine-4 of the budding yeast RNAP II CTD couples transcription with Htz1-mediated chromatin remodeling
inferred← citeshttps://doi.org/10.1073/pnas.1424804112openalex-snapshot
MPE-seq, a new method for the genome-wide analysis of chromatin structure
inferred← citeshttps://doi.org/10.1073/pnas.1605543113openalex-snapshot
Regulated large-scale nucleosome density patterns and precise nucleosome positioning correlate with V(D)J recombination
inferred← citeshttps://doi.org/10.1073/pnas.1815424116openalex-snapshot
The base pair-scale diffusion of nucleosomes modulates binding of transcription factors
inferred← citeshttps://doi.org/10.1073/pnas.2210595119openalex-snapshot
EBF1 is continuously required for stabilizing local chromatin accessibility in pro-B cells
inferred← citeshttps://doi.org/10.1073/pnas.2319772121openalex-snapshot
Nucleosomes play a dual role in regulating transcription dynamics
inferred← citeshttps://doi.org/10.1074/jbc.r117.001232openalex-snapshot
Pioneer transcription factors shape the epigenetic landscape
inferred← citeshttps://doi.org/10.1080/10495398.2024.2394692openalex-snapshot
Spatial distribution of maternal factors in pig mature oocytes
inferred← citeshttps://doi.org/10.1080/15592294.2015.1053682openalex-snapshot
Histone variants as emerging regulators of embryonic stem cell identity
inferred← citeshttps://doi.org/10.1080/19491034.2016.1226717openalex-snapshot
Chromatin condensation during terminal erythropoiesis
inferred← citeshttps://doi.org/10.1080/21541264.2016.1242456openalex-snapshot
Steroid hormone receptors silence genes by a chromatin-targeted mechanism similar to those used for gene activation
inferred← citeshttps://doi.org/10.1093/bib/bbv086openalex-snapshot
Nucleosome positioning: resources and tools online
inferred← citeshttps://doi.org/10.1093/hmg/ddw216openalex-snapshot
Identification and function of enhancers in the human genome
inferred← citeshttps://doi.org/10.1093/nar/gkaa552openalex-snapshot
NC2 complex is a key factor for the activation of catalase-3 transcription by regulating H2A.Z deposition
inferred← citeshttps://doi.org/10.1093/nar/gkag371openalex-snapshot
H2A.Z facilitates Sox2-nucleosome interaction by promoting DNA and histone H3 tail mobility
inferred← citeshttps://doi.org/10.1093/nar/gkv825openalex-snapshot
The histone variant H2A.Z is an important regulator of enhancer activity
inferred← citeshttps://doi.org/10.1093/nar/gkz627openalex-snapshot
Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2
inferred← citeshttps://doi.org/10.1098/rsob.160127openalex-snapshot
Crystal structures of heterotypic nucleosomes containing histones H2A.Z and H2A
inferred← citeshttps://doi.org/10.1098/rsob.200255openalex-snapshot
Establishment and function of chromatin modification at enhancers
inferred← citeshttps://doi.org/10.1101/2023.01.03.522557openalex-snapshot
TOBF1 modulates mouse embryonic stem cell fate through co-transcriptional regulation of alternative splicing
inferred← citeshttps://doi.org/10.1101/2023.05.10.540098openalex-snapshot
Detection of new pioneer transcription factors as cell-type specific nucleosome binders
inferred← citeshttps://doi.org/10.1101/2023.10.06.561228openalex-snapshot
Joint sequence & chromatin neural networks characterize the differential abilities of Forkhead transcription factors to engage inaccessible chromatin
inferred← citeshttps://doi.org/10.1101/2023.11.06.565891openalex-snapshot
Regulation of chromatin transcription dynamics by DNA supercoiling
inferred← citeshttps://doi.org/10.1101/2024.07.14.603444openalex-snapshot
SWR1 is recruited to activated ABA response genes to maintain gene body H2A.Z in Arabidopsis thaliana
inferred← citeshttps://doi.org/10.1101/2025.09.10.675314openalex-snapshot
Pioneer factor FOXA1 can boost CHO cell productivity
inferred← citeshttps://doi.org/10.1101/464081openalex-snapshot
Promoter-intrinsic and local chromatin features determine gene repression in lamina-associated domains
inferred← citeshttps://doi.org/10.1101/cshperspect.a015263openalex-snapshot
Epigenetic Regulation of Epidermal Differentiation
inferred← citeshttps://doi.org/10.1101/cshperspect.a019364openalex-snapshot
Histone Variants and Epigenetics
inferred← citeshttps://doi.org/10.1101/gad.228536.113openalex-snapshot
CLOCK:BMAL1 is a pioneer-like transcription factor
inferred← citeshttps://doi.org/10.1101/gad.238873.114openalex-snapshot
Histone variants: dynamic punctuation in transcription
inferred← citeshttps://doi.org/10.1101/gad.253443.114openalex-snapshot
Pioneer transcription factors in cell reprogramming
inferred← citeshttps://doi.org/10.1101/gad.295188.116openalex-snapshot
The histone variant H2A.Z promotes efficient cotranscriptional splicing in S. cerevisiae
inferred← citeshttps://doi.org/10.1101/gad.337691.120openalex-snapshot
Collapse of the hepatic gene regulatory network in the absence of FoxA factors
inferred← citeshttps://doi.org/10.1101/gr.142067.112openalex-snapshot
DANPOS: Dynamic analysis of nucleosome position and occupancy by sequencing
inferred← citeshttps://doi.org/10.1101/gr.164418.113openalex-snapshot
Nucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem cell development
inferred← citeshttps://doi.org/10.1104/pp.16.00332openalex-snapshot
Regulation of microRNA-mediated developmental changes by the SWR1 chromatin remodeling complex in Arabidopsis thaliana
inferred← citeshttps://doi.org/10.1105/tpc.17.00867openalex-snapshot
The Chromatin Remodelers PKL and PIE1 Act in an Epigenetic Pathway That Determines H3K27me3 Homeostasis in Arabidopsis
inferred← citeshttps://doi.org/10.1107/s090744491302252xopenalex-snapshot
Structural polymorphism in the L1 loop regions of human H2A.Z.1 and H2A.Z.2
inferred← citeshttps://doi.org/10.1111/acel.12742openalex-snapshot
Changes at the nuclear lamina alter binding of pioneer factor Foxa2 in aged liver
inferred← citeshttps://doi.org/10.1111/ede.12217openalex-snapshot
The origins of developmental gene regulation
inferred← citeshttps://doi.org/10.1111/nph.70408openalex-snapshot
ELF 6 mutation suppresses the dwarf phenotype of Arabidopsis ino80 mutant by modulating cell cycle progression
inferred← citeshttps://doi.org/10.1111/tpj.12499openalex-snapshot
ISWI proteins participate in the genome‐wide nucleosome distribution in Arabidopsis
inferred← citeshttps://doi.org/10.1111/tpj.14281openalex-snapshot
The histone variant H2A.Z and chromatin remodeler BRAHMA act coordinately and antagonistically to regulate transcription and nucleosome dynamics in Arabidopsis
inferred← citeshttps://doi.org/10.1126/sciadv.1501473openalex-snapshot
FOXA1 defines cancer cell specificity
inferred← citeshttps://doi.org/10.1128/jvi.00880-17openalex-snapshot
Hepatitis C Virus NS5A Targets Nucleosome Assembly Protein NAP1L1 To Control the Innate Cellular Response
inferred← citeshttps://doi.org/10.1128/mcb.00669-17openalex-snapshot
The Histone Variant MacroH2A Blocks Cellular Reprogramming by Inhibiting Mesenchymal-to-Epithelial Transition
inferred← citeshttps://doi.org/10.1134/s1068162015060084openalex-snapshot
Pioneer transcription factors in normal development and carcinogenesis
inferred← citeshttps://doi.org/10.1136/bmjdrc-2014-000052openalex-snapshot
Two novel type 2 diabetes loci revealed through integration of TCF7L2 DNA occupancy and SNP association data
inferred← citeshttps://doi.org/10.1139/bcb-2018-0104openalex-snapshot
FoxO1 and FoxA1/2 form a complex on DNA and cooperate to open chromatin at insulin-regulated genes
inferred← citeshttps://doi.org/10.1146/annurev-genet-030220-015007openalex-snapshot
Pioneer Transcription Factors Initiating Gene Network Changes
inferred← citeshttps://doi.org/10.1152/physrev.00001.2014openalex-snapshot
Ex Uno Plures: Molecular Designs for Embryonic Pluripotency
inferred← citeshttps://doi.org/10.1155/2021/8817581openalex-snapshot
Chromatin Regulation in Development: Current Understanding and Approaches
inferred← citeshttps://doi.org/10.1161/circulationaha.117.033114openalex-snapshot
Histone Variant H2A.Z Is Required for the Maintenance of Smooth Muscle Cell Identity as Revealed by Single-Cell Transcriptomics
inferred← citeshttps://doi.org/10.1186/1756-8935-6-28openalex-snapshot
Epigenetic coordination of signaling pathways during the epithelial-mesenchymal transition
inferred← citeshttps://doi.org/10.1186/1756-8935-7-38openalex-snapshot
Genome-wide analysis of H3.3 dissociation reveals high nucleosome turnover at distal regulatory regions of embryonic stem cells
inferred← citeshttps://doi.org/10.1186/s12864-019-5932-6openalex-snapshot
NUCLIZE for quantifying epigenome: generating histone modification data at single-nucleosome resolution using genuine nucleosome positions
inferred← citeshttps://doi.org/10.1186/s12915-018-0568-6openalex-snapshot
Histone variants H2A.Z and H3.3 coordinately regulate PRC2-dependent H3K27me3 deposition and gene expression regulation in mES cells
inferred← citeshttps://doi.org/10.1186/s13040-015-0071-3openalex-snapshot
Genome-wide predictors of NF-κB recruitment and transcriptional activity
inferred← citeshttps://doi.org/10.1186/s13072-019-0274-9openalex-snapshot
The histone variant H2A.Z in gene regulation
inferred← citeshttps://doi.org/10.1186/s13072-025-00603-8openalex-snapshot
The multitalented TIP60 chromatin remodeling complex: wearing many hats in epigenetic regulation, cell division and diseases
inferred← citeshttps://doi.org/10.1186/s13293-025-00811-7openalex-snapshot
The importance of sex dimorphism in liver metabolism and progressive liver diseases
inferred← citeshttps://doi.org/10.1186/s13619-021-00078-4openalex-snapshot
Forkhead box family transcription factors as versatile regulators for cellular reprogramming to pluripotency
inferred← citeshttps://doi.org/10.1242/dev.096982openalex-snapshot
Chromatin features and the epigenetic regulation of pluripotency states in ESCs
inferred← citeshttps://doi.org/10.1242/dev.112672openalex-snapshot
Fox transcription factors: from development to disease
inferred← citeshttps://doi.org/10.1242/dev.115808openalex-snapshot
Genome-wide characterisation of Foxa1 binding sites reveals several mechanisms for regulating neuronal differentiation in midbrain dopamine cells
inferred← citeshttps://doi.org/10.1242/dmm.046516openalex-snapshot
Of numbers and movement – understanding transcription factor pathogenesis by advanced microscopy
inferred← citeshttps://doi.org/10.1262/jrd.2017-058openalex-snapshot
Regulation of zygotic gene activation by chromatin structure and epigenetic factors
inferred← citeshttps://doi.org/10.12703/p7-01openalex-snapshot
H2A.Z: a molecular rheostat for transcriptional control
inferred← citeshttps://doi.org/10.1371/journal.pgen.1003903openalex-snapshot
The Histone Variant His2Av is Required for Adult Stem Cell Maintenance in the Drosophila Testis
inferred← citeshttps://doi.org/10.1371/journal.pgen.1004028openalex-snapshot
MBD3 Localizes at Promoters, Gene Bodies and Enhancers of Active Genes
inferred← citeshttps://doi.org/10.1371/journal.pgen.1006231openalex-snapshot
Linking Core Promoter Classes to Circadian Transcription
inferred← citeshttps://doi.org/10.15252/embj.201592116openalex-snapshot
Convergence of cMyc and β‐catenin on Tcf7l1 enables endoderm specification
inferred← citeshttps://doi.org/10.15252/embj.201593260openalex-snapshot
Hormone‐induced repression of genes requires BRG1‐mediated H1.2 deposition at target promoters
inferred← citeshttps://doi.org/10.15252/embj.2022111839openalex-snapshot
Chromatin remodeling is required for sRNA‐guided DNA elimination in Paramecium
inferred← citeshttps://doi.org/10.18130/v36n5mopenalex-snapshot
Insights into the Regulatory Activities of Chromatin Through Computational Analyses of Whole-Genome Data
inferred← citeshttps://doi.org/10.18699/vj19.467openalex-snapshot
Reorganisation of chromatin during erythroid differentiation
inferred← citeshttps://doi.org/10.21203/rs.3.rs-10302524/v1openalex-snapshot
Transcriptomic Responses Underlying Heat Resilience in Beef Cattle
inferred← citeshttps://doi.org/10.2217/epi.13.67openalex-snapshot
Dynamic Changes of the Epigenetic Landscape During Cellular Differentiation
inferred← citeshttps://doi.org/10.25560/29172openalex-snapshot
Kinetics and mechanisms of Ikaros-mediated transcriptional regulation
inferred← citeshttps://doi.org/10.32388/2cc4zmopenalex-snapshot
Identification of Epigenetic Regulators of Fibrotic Transformation in Cardiac Fibroblasts Through Bulk and Single-Cell CRISPR Screens
inferred← citeshttps://doi.org/10.3389/fcell.2022.767773openalex-snapshot
Histone Chaperones as Cardinal Players in Development
inferred← citeshttps://doi.org/10.3389/fimmu.2026.1792863openalex-snapshot
Multidimensional regulatory mechanisms and translational potential of epigenetic networks in the rheumatoid arthritis disease course
inferred← citeshttps://doi.org/10.3390/biology9080213openalex-snapshot
Non-Coding RNAs and Nucleosome Remodeling Complexes: An Intricate Regulatory Relationship
inferred← citeshttps://doi.org/10.3390/biom14080993openalex-snapshot
The Function of H2A Histone Variants and Their Roles in Diseases
inferred← citeshttps://doi.org/10.3390/biomedicines11082159openalex-snapshot
Role of Fork-Head Box Genes in Breast Cancer: From Drug Resistance to Therapeutic Targets
inferred← citeshttps://doi.org/10.3390/genes12071012openalex-snapshot
Genome Reorganization during Erythroid Differentiation
inferred← citeshttps://doi.org/10.3390/genes6020299openalex-snapshot
Chromatin Remodelers: From Function to Dysfunction
inferred← citeshttps://doi.org/10.3390/ijms140917861openalex-snapshot
Epidermal Stem Cells and Their Epigenetic Regulation
inferred← citeshttps://doi.org/10.3390/jdb10030028openalex-snapshot
The Role of the Histone Variant H2A.Z in Metazoan Development
inferred← citeshttps://doi.org/10.3390/molecules23081914openalex-snapshot
Pioneer Factors in Animals and Plants—Colonizing Chromatin for Gene Regulation
inferred← citeshttps://doi.org/10.3892/ijmm.2025.5631openalex-snapshot
Function of epigenetic modifications in wound healing and potential therapies (Review)
inferred← citeshttps://doi.org/10.4172/2157-2518.s5-001openalex-snapshot
Histones: Controlling Tumor Signaling Circuitry
inferred← citeshttps://doi.org/10.53846/goediss-6125openalex-snapshot
The Role of RNF40 mediated H2B monoubiquitination in transcription
inferred← citeshttps://doi.org/10.64898/2026.07.23.738035openalex-snapshot
Effect of nuclear electrostatic potential on the nucleoplasmic distribution of histones and nucleosome stability
inferred← citeshttps://doi.org/10.64898/2026.09.24.753912openalex-snapshot
Nucleosome Core Allostery Governs Chromatin Recognition and Cell Fate
inferred← citeshttps://doi.org/10.70675/4a1dc94dzc25bz4007z952cz1d4dccdde1e8openalex-snapshot
Contrôle de l'homéostasie épithéliale intestinale par la dynamique des isoformes du variant d'histone H2A.Z
inferred← citeshttps://doi.org/10.70675/8f882ab9z86fcz4247z8553z252d06504550openalex-snapshot
Le facteur de réparation XPC est un cofacteur de l'ARN polymérase II régulant les modifications post-traductionnelles des histones lors de la transcription
inferred← citeshttps://doi.org/10.70675/95774cf6z713dz4df5z92b1z76204ad8b669openalex-snapshot
Gene coregulation in cis within the 3D genome – A single-molecule imaging study
inferred← citeshttps://doi.org/10.70675/daf5feb1z2f61z4e8bzb3a6za907fab675b8openalex-snapshot
Dynamique chromatinienne lors de l'activation des enhancers au cours de la différenciation cellulaire
inferred← citeshttps://doi.org/10.70675/e61e4cf3z6af7z4766z8412zde6fc6de0dbeopenalex-snapshot
Multiscale analysis of poly-ADP-ribosylation dependent chromatin remodeling mechanisms at DNA breaks
inferred← citeshttps://doi.org/10.7150/ijbs.7998openalex-snapshot
The Epigenomics of Embryonic Stem Cell Differentiation
inferred← citeshttps://doi.org/10.7554/elife.88936openalex-snapshot
Detection of new pioneer transcription factors as cell-type-specific nucleosome binders
inferred← citeshttps://doi.org/10.7554/elife.88936.2openalex-snapshot
Detection of new pioneer transcription factors as cell-type specific nucleosome binders
inferred← citeshttps://doi.org/10.7554/elife.88936.3openalex-snapshot
Detection of new pioneer transcription factors as cell-type specific nucleosome binders
inferred← citeshttps://doi.org/10.7554/elife.88936.4openalex-snapshot
Detection of new pioneer transcription factors as cell-type-specific nucleosome binders
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