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Periphytic biofilms-mediated microbial interactions and their impact on the nitrogen cycle in rice paddies

https://doi.org/10.1016/j.eehl.2022.09.004
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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The food web perspective on aquatic biofilms
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Two kinds of lithotrophs missing in nature
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Two kinds of lithotrophs missing in nature
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Patterns of Metal Accumulation by Natural River Biofilms During Their Growth and Seasonal Succession
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Microorganisms meet solid minerals: interactions and biotechnological applications
inferredcites →https://doi.org/10.1007/s11368-016-1575-2openalex-snapshot
Periphyton biofilm development and its role in nutrient cycling in paddy microcosms
inferredcites →https://doi.org/10.1007/s11368-017-1881-3openalex-snapshot
Microalgae and their effects on metal bioavailability in paddy fields
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Soil Microbiology, Ecology and Biochemistry
inferredcites →https://doi.org/10.1016/c2018-0-05260-3openalex-snapshot
Principles and Applications of Soil Microbiology
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A review on the use of microalgal consortia for wastewater treatment
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Denitrification and aerobic respiration, hybrid electron transport chains and co-evolution
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Mechanisms of removing pollutants from aqueous solutions by microorganisms and their aggregates: A review
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Nutrient removal by up-scaling a hybrid floating treatment bed (HFTB) using plant and periphyton: From laboratory tank to polluted river
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Periphytic biofilms: A promising nutrient utilization regulator in wetlands
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The counter-balance between ammonia absorption and the stimulation of volatilization by periphyton in shallow aquatic systems
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Functional microorganisms and enzymes related nitrogen cycle in the biofilm performing simultaneous nitrification and denitrification
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Extracellular polymeric substances (EPS) of microbial aggregates in biological wastewater treatment systems: A review
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Periphytic biofilm: A buffer for phosphorus precipitation and release between sediments and water
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Microstructure, bacterial community and metabolic prediction of multi-species biofilms following exposure to di-(2-ethylhexyl) phthalate (DEHP)
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Different fouling propensities of loosely and tightly bound extracellular polymeric substances (EPSs) and the related fouling mechanisms in a membrane bioreactor
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Exploring the potential of algae/bacteria interactions
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The nitrogen cycle
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Cultivation substrata differentiate the properties of river biofilm EPS and their binding of heavy metals: A spectroscopic insight
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Decolorization of high concentration crystal violet by periphyton bioreactors and potential of effluent reuse for agricultural purposes
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Functional sustainability of periphytic biofilms in organic matter and Cu2+ removal during prolonged exposure to TiO2 nanoparticles
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Pollution monitoring, risk assessment and target remediation of heavy metals in rice from a five-year investigation in Western Fujian region, China
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Microalgal-bacterial consortia: From interspecies interactions to biotechnological applications
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The effect of periphyton on seed germination and seedling growth of rice (Oryza sativa) in paddy area
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Nitrogen loading affects microbes, nitrifiers and denitrifiers attached to submerged macrophyte in constructed wetlands
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Periphyton bioconcentrates pesticides downstream of catchment dominated by agricultural land use
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Interactions between dicyandiamide and periphytic biofilms in paddy soils and subsequent effects on nitrogen cycling
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A critical review of aerobic denitrification: Insights into the intracellular electron transfer
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Development of fertilizers for enhanced nitrogen use efficiency – Trends and perspectives
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Ratoon rice production in central China: Environmental sustainability and food production
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Mitigation of methane emission in a rice paddy field amended with biochar-based slow-release fertilizer
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Interactions between periphytic biofilms and dissolved organic matter at soil-water interface and the consequent effects on soil phosphorus fraction changes
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Disentangling abiotic and biotic controls of aerobic methane oxidation during re-colonization
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The contribution of ammonia-oxidizing archaea and bacteria to gross nitrification under different substrate availability
inferredcites →https://doi.org/10.1016/j.still.2021.105274openalex-snapshot
Nitrogen-fixing cyanobacteria have the potential to improve nitrogen use efficiency through the reduction of ammonia volatilization in red soil paddy fields
inferredcites →https://doi.org/10.1016/j.tibtech.2018.06.009openalex-snapshot
How Microbial Aggregates Protect against Nanoparticle Toxicity
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Using Microbial Aggregates to Entrap Aqueous Phosphorus
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Off the hook – how bacteria survive protozoan grazing
inferredcites →https://doi.org/10.1016/j.tim.2006.03.006openalex-snapshot
Why is metabolic labour divided in nitrification?
inferredcites →https://doi.org/10.1016/j.tim.2016.05.004openalex-snapshot
A New Perspective on Microbes Formerly Known as Nitrite-Oxidizing Bacteria
inferredcites →https://doi.org/10.1016/j.tim.2019.07.004openalex-snapshot
Nanoparticle–Biofilm Interactions: The Role of the EPS Matrix
inferredcites →https://doi.org/10.1016/j.tim.2020.03.016openalex-snapshot
Biofilm Matrixome: Extracellular Components in Structured Microbial Communities
inferredcites →https://doi.org/10.1016/j.watres.2010.10.016openalex-snapshot
Rotating disk electrodes to assess river biofilm thickness and elasticity
inferredcites →https://doi.org/10.1016/j.watres.2011.10.034openalex-snapshot
Integration of anammox into the aerobic granular sludge process for main stream wastewater treatment at ambient temperatures
inferredcites →https://doi.org/10.1016/j.watres.2017.04.054openalex-snapshot
Enhancing denitrification using a novel in situ membrane biofilm reactor (isMBfR)
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Carbon-nutrient stoichiometry drives phosphorus immobilization in phototrophic biofilms at the soil-water interface in paddy fields
inferredcites →https://doi.org/10.1016/j.watres.2020.115539openalex-snapshot
Hotspot of dissimilatory nitrate reduction to ammonium (DNRA) process in freshwater sediments of riparian zones
inferredcites →https://doi.org/10.1016/j.watres.2020.116723openalex-snapshot
Hydroxylamine and the nitrogen cycle: A review
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Simultaneous carbon and nitrogen removal from high strength domestic wastewater in an aerobic RBC biofilm
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Nitrogen fixation and photosynthetic oxygen evolution in cyanobacteria
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A Critical Review on Nitrous Oxide Production by Ammonia-Oxidizing Archaea
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Soil Organic Carbon Enrichment Triggers In Situ Nitrogen Interception by Phototrophic Biofilms at the Soil–Water Interface: From Regional Scale to Microscale
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Sustained High Nutrient Supply As an Allelopathic Trigger between Periphytic Biofilm and Microcystis aeruginosa
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Responses of Periphyton to Fe2O3 Nanoparticles: A Physiological and Ecological Basis for Defending Nanotoxicity
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Metabolomics Uncovers the Regulatory Pathway of Acyl-homoserine Lactones Based Quorum Sensing in Anammox Consortia
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Biofilm formation enables free-living nitrogen-fixing rhizobacteria to fix nitrogen under aerobic conditions
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Denitrifying community in coastal sediments performs aerobic and anaerobic respiration simultaneously
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Isolation of an autotrophic ammonia-oxidizing marine archaeon
inferredcites →https://doi.org/10.1038/nature08465openalex-snapshot
Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria
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The microbial nitrogen-cycling network
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Electron transfer in syntrophic communities of anaerobic bacteria and archaea
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Discovery of several novel, widespread, and ecologically distinct marine Thaumarchaeota viruses that encode amoC nitrification genes
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Affinity informs environmental cooperation between ammonia-oxidizing archaea (AOA) and anaerobic ammonia-oxidizing (Anammox) bacteria
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Contribution of horizontal gene transfer to the functionality of microbial biofilm on a macroalgae
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Potential virus-mediated nitrogen cycling in oxygen-depleted oceanic waters
inferredcites →https://doi.org/10.1038/s41396-020-0710-7openalex-snapshot
Alternative strategies of nutrient acquisition and energy conservation map to the biogeography of marine ammonia-oxidizing archaea
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Genomic and metabolic adaptations of biofilms to ecological windows of opportunity in glacier-fed streams
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Microbial functional genes elucidate environmental drivers of biofilm metabolism in glacier-fed streams
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Co-incorporation of manure and inorganic fertilizer improves leaf physiological traits, rice production and soil functionality in a paddy field
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Ammonia oxidation pathways and nitrifier denitrification are significant sources of N 2 O and NO under low oxygen availability
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Ammonia-oxidizing archaea use the most energy-efficient aerobic pathway for CO 2 fixation
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Redesigning photosynthesis to sustainably meet global food and bioenergy demand
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Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genus Nitrospira
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Gene Transfer from Bacteria and Archaea Facilitated Evolution of an Extremophilic Eukaryote
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The do-it-all nitrifier
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Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation
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Oxygen and nitrogen production by an ammonia-oxidizing archaeon
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Allelopathy as a potential strategy to improve microalgae cultivation
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What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1016/j.scitotenv.2024.175500openalex-snapshot
Migration, transformation of arsenic, and pollution controlling strategies in paddy soil-rice system: A comprehensive review
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2025.179839openalex-snapshot
Algal diversity: A key driver of nitrogen immobilization by phototrophic biofilms at soil-water interfaces in paddy fields
inferred← citeshttps://doi.org/10.1016/j.watres.2024.122472openalex-snapshot
Water periods impact the structure and metabolic potential of the nitrogen-cycling microbial communities in rivers of arid and semi-arid regions
inferred← citeshttps://doi.org/10.1016/j.watres.2026.126465openalex-snapshot
Signal molecules in microalgal-bacterial partial nitrification-anammox systems: Roles, mechanisms, and prospects
inferred← citeshttps://doi.org/10.1021/acs.est.5c06047openalex-snapshot
Periphyton-Driven Arsenic Methylation in Paddy Soils: The Crucial Role of Trophic Interactions
inferred← citeshttps://doi.org/10.1021/acsestengg.5c00812openalex-snapshot
Phototrophic Biofilm Decomposition Enhances Dissimilatory Nitrate Reduction to Ammonia in Paddy Soil
inferred← citeshttps://doi.org/10.1021/acsestwater.4c00032openalex-snapshot
Pollutant Behavior at the Soil/Sediment–Water Interface: From Two to Multiple Phases
inferred← citeshttps://doi.org/10.1063/5.0335159openalex-snapshot
Biofilms: From medical challenge to engineering innovation and ecological marvel
inferred← citeshttps://doi.org/10.1093/ismeco/ycaf187openalex-snapshot
How river drying influences greenhouse gas emissions: insights from species and gene shifts
inferred← citeshttps://doi.org/10.1093/nsr/nwag016openalex-snapshot
Periphyton closes the nitrogen budget gap in rice paddies
inferred← citeshttps://doi.org/10.1134/s1064229323603670openalex-snapshot
Enhanced-Efficiency Urea Coated with Ground Phosphate Rock Powder, Inhibitor and Epoxy Resin: Preparation and Effects on Soil Nitrogen Supply Capacity, Wheat Yield and Nitrogen Use Efficiency
inferred← citeshttps://doi.org/10.1186/s40793-025-00837-9openalex-snapshot
Agricultural land use shapes short and long‑term bacterial diversity, community structure, and assembly in biofilms of adjacent streams
inferred← citeshttps://doi.org/10.18307/2024.0501openalex-snapshot
Research progress on community composition and assembly mechanism of epiphytic bacterial community associated with aquatic macrophytes
inferred← citeshttps://doi.org/10.20517/energymater.2023.147openalex-snapshot
Electrochemically nitrate remediation by single-atom catalysts: advances, mechanisms, and prospects
inferred← citeshttps://doi.org/10.2139/ssrn.5281071openalex-snapshot
Multifunctional Soil Amendments Influence Soil Nitrogen-Functional Microbial Communities and Enhance Crop Yield
inferred← citeshttps://doi.org/10.3390/agriculture13122226openalex-snapshot
Multi-Sample Detection of Soil Nitrate Nitrogen Using a Digital Microfluidic Platform
inferred← citeshttps://doi.org/10.3390/plants14213237openalex-snapshot
Physiological Response to Nitrogen Deficit in Potato Under Greenhouse Conditions
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