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Host identity determines plant associated resistomes
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/s00253-015-6416-5openalex-snapshot
Increased levels of antibiotic resistance in urban stream of Jiulongjiang River, China
inferredcites →https://doi.org/10.1016/j.chom.2017.07.004openalex-snapshot
Establishing Causality: Opportunities of Synthetic Communities for Plant Microbiome Research
inferredcites →https://doi.org/10.1016/j.envint.2016.11.001openalex-snapshot
Does organically produced lettuce harbor higher abundance of antibiotic resistance genes than conventionally produced?
inferredcites →https://doi.org/10.1016/j.envint.2018.05.011openalex-snapshot
Tracking antibiotic resistome during wastewater treatment using high throughput quantitative PCR
inferredcites →https://doi.org/10.1016/j.envint.2019.01.017openalex-snapshot
Long-term application of organic fertilization causes the accumulation of antibiotic resistome in earthworm gut microbiota
inferredcites →https://doi.org/10.1016/j.jhazmat.2015.05.028openalex-snapshot
Antibiotic resistance genes in manure-amended soil and vegetables at harvest
inferredcites →https://doi.org/10.1016/j.scitotenv.2013.01.032openalex-snapshot
Urban wastewater treatment plants as hotspots for antibiotic resistant bacteria and genes spread into the environment: A review
inferredcites →https://doi.org/10.1016/j.scitotenv.2018.07.260openalex-snapshot
Long-term organic fertilization increased antibiotic resistome in phyllosphere of maize
inferredcites →https://doi.org/10.1016/j.soilbio.2018.08.018openalex-snapshot
Antibiotic resistance genes and associated bacterial communities in agricultural soils amended with different sources of animal manures
inferredcites →https://doi.org/10.1016/j.tim.2006.02.006openalex-snapshot
Co-selection of antibiotic and metal resistance
inferredcites →https://doi.org/10.1016/j.tplants.2019.02.010openalex-snapshot
Antibiotic Resistomes in Plant Microbiomes
inferredcites →https://doi.org/10.1016/j.watres.2012.11.027openalex-snapshot
Urban wastewater treatment plants as hotspots for the release of antibiotics in the environment: A review
inferredcites →https://doi.org/10.1021/acs.est.5b01012openalex-snapshot
Antibiotic Resistome and Its Association with Bacterial Communities during Sewage Sludge Composting
inferredcites →https://doi.org/10.1021/acs.est.5b03521openalex-snapshot
Bacterial Community Shift Drives Antibiotic Resistance Promotion during Drinking Water Chlorination
inferredcites →https://doi.org/10.1021/acs.est.7b01420openalex-snapshot
Application of Struvite Alters the Antibiotic Resistome in Soil, Rhizosphere, and Phyllosphere
inferredcites →https://doi.org/10.1021/acs.est.7b04760openalex-snapshot
Effect of Different Treatment Technologies on the Fate of Antibiotic Resistance Genes and Class 1 Integrons when Residual Municipal Wastewater Solids are Applied to Soil
inferredcites →https://doi.org/10.1021/acs.est.8b02204openalex-snapshot
Global Survey of Antibiotic Resistance Genes in Air
inferredcites →https://doi.org/10.1021/acs.est.8b02825openalex-snapshot
Exposure of a Soil Collembolan to Ag Nanoparticles and AgNO3Disturbs Its Associated Microbiota and Lowers the Incidence of Antibiotic Resistance Genes in the Gut
inferredcites →https://doi.org/10.1021/acs.est.8b05116openalex-snapshot
Land Use Influences Antibiotic Resistance in the Microbiome of Soil Collembolans Orchesellides sinensis
inferredcites →https://doi.org/10.1021/acs.estlett.7b00561openalex-snapshot
Seasonal Disparities in Airborne Bacteria and Associated Antibiotic Resistance Genes in PM 2.5 between Urban and Rural Sites
inferredcites →https://doi.org/10.1021/es502615eopenalex-snapshot
High Throughput Profiling of Antibiotic Resistance Genes in Urban Park Soils with Reclaimed Water Irrigation
inferredcites →https://doi.org/10.1038/ismej.2014.226openalex-snapshot
Using the class 1 integron-integrase gene as a proxy for anthropogenic pollution
inferredcites →https://doi.org/10.1038/nature11237openalex-snapshot
Defining the core Arabidopsis thaliana root microbiome
inferredcites →https://doi.org/10.1038/nature11336openalex-snapshot
Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
inferredcites →https://doi.org/10.1038/nmeth.f.303openalex-snapshot
QIIME allows analysis of high-throughput community sequencing data
inferredcites →https://doi.org/10.1038/nmicrobiol.2016.270openalex-snapshot
Continental-scale pollution of estuaries with antibiotic resistance genes
inferredcites →https://doi.org/10.1046/j.1469-8137.2003.00697.xopenalex-snapshot
Horizontal gene transfer in the phytosphere
inferredcites →https://doi.org/10.1073/pnas.0905240106openalex-snapshot
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria
inferredcites →https://doi.org/10.1073/pnas.1222743110openalex-snapshot
Diverse and abundant antibiotic resistance genes in Chinese swine farms
inferredcites →https://doi.org/10.1073/pnas.1409836111openalex-snapshot
Bloom of resident antibiotic-resistant bacteria in soil following manure fertilization
inferredcites →https://doi.org/10.1073/pnas.1414592112openalex-snapshot
Structure, variation, and assembly of the root-associated microbiomes of rice
inferredcites →https://doi.org/10.1093/bioinformatics/btq461openalex-snapshot
Search and clustering orders of magnitude faster than BLAST
inferredcites →https://doi.org/10.1093/bioinformatics/btr507openalex-snapshot
FLASH: fast length adjustment of short reads to improve genome assemblies
inferredcites →https://doi.org/10.1093/nar/gkn879openalex-snapshot
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
inferredcites →https://doi.org/10.1094/mpmi-01-15-0016-ropenalex-snapshot
Linking Jasmonic Acid Signaling, Root Exudates, and Rhizosphere Microbiomes
inferredcites →https://doi.org/10.1111/nph.13312openalex-snapshot
The importance of the microbiome of the plant holobiont
inferredcites →https://doi.org/10.1111/nyas.13296openalex-snapshot
Application of genomic technologies to measure and monitor antibiotic resistance in animals
inferredcites →https://doi.org/10.1126/science.1159483openalex-snapshot
Antibiotics and Antibiotic Resistance Genes in Natural Environments
inferredcites →https://doi.org/10.1126/science.aaa8764openalex-snapshot
Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa
inferredcites →https://doi.org/10.1128/aac.38.7.1447openalex-snapshot
Transfer of antibiotic resistance genes between gram-positive and gram-negative bacteria
inferredcites →https://doi.org/10.1128/aem.02766-17openalex-snapshot
Impact of Wastewater Treatment on the Prevalence of Integrons and the Genetic Diversity of Integron Gene Cassettes
inferredcites →https://doi.org/10.1128/aem.02781-15openalex-snapshot
Microbial and Functional Diversity within the Phyllosphere of Espeletia Species in an Andean High-Mountain Ecosystem
inferredcites →https://doi.org/10.1128/aem.05087-11openalex-snapshot
Acquired Antibiotic Resistance: Are We Born with It?
inferredcites →https://doi.org/10.1128/mbio.01017-13openalex-snapshot
Diverse Antibiotic Resistance Genes in Dairy Cow Manure
inferredcites →https://doi.org/10.1128/mbio.01300-18openalex-snapshot
The Transferable Resistome of Produce
inferredcites →https://doi.org/10.1128/mbio.02527-14openalex-snapshot
The Soil Microbiome Influences Grapevine-Associated Microbiota
inferredcites →https://doi.org/10.1128/msystems.00028-16openalex-snapshot
Getting the Hologenome Concept Right: an Eco-Evolutionary Framework for Hosts and Their Microbiomes
inferredcites →https://doi.org/10.1146/annurev-arplant-050312-120106openalex-snapshot
Structure and Functions of the Bacterial Microbiota of Plants
inferredcites →https://doi.org/10.1146/annurev-cellbio-092910-154055openalex-snapshot
Hormonal Modulation of Plant Immunity
inferredcites →https://doi.org/10.1186/s40168-017-0298-yopenalex-snapshot
Metagenomics of urban sewage identifies an extensively shared antibiotic resistome in China
inferredcites →https://doi.org/10.1371/journal.pbio.1002352openalex-snapshot
Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation
inferredcites →https://doi.org/10.32614/cran.package.veganopenalex-snapshot
vegan: Community Ecology Package
inferredcites →https://doi.org/10.3389/fmicb.2019.00194openalex-snapshot
Fate of Antibiotic Resistant Pseudomonas putida and Broad Host Range Plasmid in Natural Soil Microcosms
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.2139/ssrn.4669832openalex-extracted
Vermicompost Affects the Dispersal of Antibiotic Resistome in Types of Soils by Stimulating Microbial Cooperation
inferred← citeshttps://doi.org/10.1007/s00284-026-05026-6openalex-snapshot
Dynamics of Bacterial Communities and Resistomes Across Swine Waste Stabilization Ponds and Fertilized Soils
inferred← citeshttps://doi.org/10.1007/s11104-026-08399-6openalex-snapshot
The enrichment and source pathways of antibiotic resistance genes in leaf endophytes of organic vegetable mediated by light intensity
inferred← citeshttps://doi.org/10.1016/j.actaastro.2025.10.040openalex-snapshot
Simulated microgravity promotes the accumulation of zoonotic pathogens and antibiotic resistance genes in the endophytic bacteria of lettuce leaf
inferred← citeshttps://doi.org/10.1016/j.agee.2025.110062openalex-snapshot
Phyllosphere to soil: How long-term fencing reshapes grassland microbial community construction and the functional genes
inferred← citeshttps://doi.org/10.1016/j.apsoil.2025.106423openalex-snapshot
Exploring the interaction between vermicompost application and soil types on the dispersal of antibiotic resistome above- and belowground
inferred← citeshttps://doi.org/10.1016/j.biortech.2023.128636openalex-snapshot
Response characteristics of antibiotic resistance genes and bacterial communities during agricultural waste composting: Focusing on biogas residue combined with biochar amendments
inferred← citeshttps://doi.org/10.1016/j.chemosphere.2023.139272openalex-snapshot
Effect of fertilizer type on antibiotic resistance genes by reshaping the bacterial community and soil properties
inferred← citeshttps://doi.org/10.1016/j.ecoenv.2023.115551openalex-snapshot
Insights into the reduction of antibiotic-resistant bacteria and mobile antibiotic resistance genes by black soldier fly larvae in chicken manure
inferred← citeshttps://doi.org/10.1016/j.ecoenv.2025.119447openalex-snapshot
Migration characteristics of ARGs from pig manure in compost - soil - lettuce
inferred← citeshttps://doi.org/10.1016/j.envint.2023.107903openalex-snapshot
Phyllosphere antibiotic resistome in a natural primary vegetation across a successional sequence after glacier retreat
inferred← citeshttps://doi.org/10.1016/j.envint.2024.108688openalex-snapshot
Assembly and succession of the phyllosphere microbiome and nutrient-cycling genes during plant community development in a glacier foreland
inferred← citeshttps://doi.org/10.1016/j.envint.2024.108834openalex-snapshot
Effects of nitrogen fertilization on the fate of high-risk antibiotic resistance genes in reclaimed water-irrigated soil and plants
inferred← citeshttps://doi.org/10.1016/j.envpol.2024.125534openalex-snapshot
Microbial diversity and environmental determinants at Shanghai Hongqiao railway station: A comprehensive microbial assessment
inferred← citeshttps://doi.org/10.1016/j.envres.2022.113760openalex-snapshot
Impact of organic soil amendments in antibiotic levels, antibiotic resistance gene loads, and microbiome composition in corn fields and crops
inferred← citeshttps://doi.org/10.1016/j.eti.2024.103985openalex-snapshot
Transmission pathways and intrinsic mechanisms of antibiotic resistance genes in soil-plant systems: A review
inferred← citeshttps://doi.org/10.1016/j.fufo.2025.100771openalex-snapshot
Potential impacts of carbon pricing on vegetable cold chains
inferred← citeshttps://doi.org/10.1016/j.horiz.2024.100128openalex-snapshot
Exploring potential ecological risks of antibiotic–resistance genes in soil–plant systems caused by manure application
inferred← citeshttps://doi.org/10.1016/j.jare.2022.02.003openalex-snapshot
Phyllosphere-associated microbiota in built environment: Do they have the potential to antagonize human pathogens?
inferred← citeshttps://doi.org/10.1016/j.jenvman.2023.118143openalex-snapshot
Removal of chloramphenicol and resistance gene changes in electric-integrated vertical flow constructed wetlands
inferred← citeshttps://doi.org/10.1016/j.jenvman.2025.124485openalex-snapshot
Unveiling the sustained effects of plant root exudates on soil microbiome and resistome and the related functional traits
inferred← citeshttps://doi.org/10.1016/j.jes.2021.04.032openalex-snapshot
Film mulching reduces antibiotic resistance genes in the phyllosphere of lettuce
inferred← citeshttps://doi.org/10.1016/j.jes.2022.06.006openalex-snapshot
Plant cultivar determined bacterial community and potential risk of antibiotic resistance gene spread in the phyllosphere
inferred← citeshttps://doi.org/10.1016/j.jes.2024.05.039openalex-snapshot
Plant secretions and volatiles contribute to the evolution of bacterial antibiotic resistance in soil-crop system
inferred← citeshttps://doi.org/10.1016/j.jhazmat.2021.125595openalex-snapshot
Diversity and abundance of antibiotic resistance genes in rhizosphere soil and endophytes of leafy vegetables: Focusing on the effect of the vegetable species
inferred← citeshttps://doi.org/10.1016/j.jhazmat.2022.130091openalex-snapshot
Host species and microplastics differentiate the crop root endophytic antibiotic resistome
inferred← citeshttps://doi.org/10.1016/j.jhazmat.2025.140364openalex-snapshot
Dual roles of polystyrene nanoplastics in reshaping antibiotic resistance genes dynamics in soil–plant systems: Highlighting shifts in specific hosts and functions
inferred← citeshttps://doi.org/10.1016/j.marenvres.2023.105920openalex-snapshot
Mangroves leaves phyllosphere bacteria community and its ability to survive under pyrene stress during the acclimation process
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.147093openalex-snapshot
Ryegrass (Lolium multiflorum L.) and Indian mustard (Brassica juncea L.) intercropping can improve the phytoremediation of antibiotics and antibiotic resistance genes but not heavy metals
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.152851openalex-snapshot
Diverse antibiotic resistance genes and potential pathogens inhabit in the phyllosphere of fresh vegetables
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2022.154463openalex-snapshot
The overlap of soil and vegetable microbes drives the transfer of antibiotic resistance genes from manure-amended soil to vegetables
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2022.159847openalex-snapshot
Plants select antibiotic resistome in rhizosphere in early stage
inferred← citeshttps://doi.org/10.1016/j.tim.2025.10.007openalex-snapshot
Tackling the active antibiotic-resistant bacteria in soils
inferred← citeshttps://doi.org/10.1021/acs.est.1c00811openalex-snapshot
Deciphering Potential Roles of Earthworms in Mitigation of Antibiotic Resistance in the Soils from Diverse Ecosystems
inferred← citeshttps://doi.org/10.1021/acs.est.1c08733openalex-snapshot
Does Plant Identity Affect the Dispersal of Resistomes Above and Below Ground?
inferred← citeshttps://doi.org/10.1021/acs.est.2c04730openalex-snapshot
Short-Term Benzalkonium Chloride (C 12 ) Exposure Induced the Occurrence of Wide-Spectrum Antibiotic Resistance in Agricultural Soils
inferred← citeshttps://doi.org/10.1021/acs.est.4c02497openalex-snapshot
Sewage Sludge Promotes the Accumulation of Antibiotic Resistance Genes in Tomato Xylem
inferred← citeshttps://doi.org/10.1021/acs.est.4c05829openalex-snapshot
Antibiotics and Pesticides Enhancing the Transfer of Resistomes among Soil-Bayberry-Fruit Fly Food Chain in the Orchard Ecosystem
inferred← citeshttps://doi.org/10.1021/envhealth.5c00385openalex-snapshot
Transmission, Health Risks and Attenuation Strategies of Antibiotic Resistance Genes in Soil-Plant Systems
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Climate change impacts on plant pathogens, food security and paths forward
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Biotic and abiotic factors distinctly drive contrasting biogeographic patterns between phyllosphere and soil resistomes in natural ecosystems
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Overuse of food-grade disinfectants threatens a global spread of antimicrobial-resistant bacteria
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Host genetic variation and specialized metabolites from wheat leaves enriches for phyllosphere Pseudomonas spp. with enriched antibiotic resistomes
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From nature to urbanity: exploring phyllosphere microbiome and functional gene responses to the Anthropocene
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Temporal Dynamics Dominates Microbiome and Resistome Assembly Despite Tetracycline Pressure in a Germfree Lettuce Model
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Interplay among manures, vegetable types, and tetracycline resistance genes in rhizosphere microbiome
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Linking Plant Secondary Metabolites and Plant Microbiomes: A Review
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Migration Characteristics of Manure-Derived Antibiotic-Resistant Bacteria in Vegetables Under Different Soil Types
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Investigation of the Plant-Growth-Promoting Potential of Plant Endophytic Keystone Taxa in Desertification Environments
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Seasonal Dynamics of Antibiotic Resistance Genes in Irrigation Canals and a Protected Wetland Receiving Treated Wastewater (Central Chile)
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Rhizosphere metabolites drive crop-specific distribution of manure-derived antibiotic resistance genes
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