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Historical logging alters soil fungal community composition and network in a tropical rainforest

https://doi.org/10.1016/j.foreco.2018.11.005
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Modelling soil organic matter decomposition and rainfall erosion in two tropical soils after forest clearing for permanent agriculture
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Genetic analysis of the species-specific parasitism of plant pathogenic fungi
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Organic matter inputs shift soil enzyme activity and allocation patterns in a wet tropical forest
inferredcites →https://doi.org/10.1007/s11104-015-2553-yopenalex-snapshot
Effects of historical logging on soil microbial communities in a subtropical forest in southern China
inferredcites →https://doi.org/10.1016/0045-6535(93)90066-eopenalex-snapshot
Tropical rain forests as carbon sinks
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Fungal communities are more sensitive indicators to non-extreme soil moisture variations than bacterial communities
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Long-term effects of clear-cutting and selective cutting on soil methane fluxes in a temperate spruce forest in southern Germany
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Short-term effects of selection and clear cutting on the shrub and herb layer vegetation during the conversion of even-aged Norway spruce stands into mixed stands
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Effect of gap size, aspect and slope on available light and soil temperature after patch-selection cutting in yellow birch–conifer stands, Quebec, Canada
inferredcites →https://doi.org/10.1016/j.foreco.2013.04.029openalex-snapshot
Diversifying the composition and structure of managed, late-successional forests with harvest gaps: What is the optimal gap size?
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Plant litter composition selects different soil microbial structures and in turn drives different litter decomposition pattern and soil carbon sequestration capability
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Relation between oak tree phenology and the secretion of organic matter degrading enzymes by Lactarius quietus ectomycorrhizas before and during bud break
inferredcites →https://doi.org/10.1016/j.soilbio.2008.03.018openalex-snapshot
Timber harvesting alters soil carbon mineralization and microbial community structure in coniferous forests
inferredcites →https://doi.org/10.1016/j.soilbio.2013.05.025openalex-snapshot
Fungal networks in yield-invigorating and -debilitating soils induced by prolonged potato monoculture
inferredcites →https://doi.org/10.1016/j.soilbio.2013.12.010openalex-snapshot
Influence of elevated atmospheric CO2 and water availability on soil fungal communities under Eucalyptus saligna
inferredcites →https://doi.org/10.1016/j.soilbio.2015.05.013openalex-snapshot
Aggregate-related changes in network patterns of nematodes and ammonia oxidizers in an acidic soil
inferredcites →https://doi.org/10.1016/j.soilbio.2015.08.041openalex-snapshot
Shifts in soil microbial community structure, nitrogen cycling and the concomitant declining N availability in ageing primary boreal forest ecosystems
inferredcites →https://doi.org/10.1016/j.soilbio.2017.09.023openalex-snapshot
Diversity and co-occurrence network of soil fungi are more responsive than those of bacteria to shifts in precipitation seasonality in a subtropical forest
inferredcites →https://doi.org/10.1016/s0038-0717(01)00018-9openalex-snapshot
Is the microbial community in a soil with reduced catabolic diversity less resistant to stress or disturbance?
inferredcites →https://doi.org/10.1016/s0169-5347(00)01906-6openalex-snapshot
Tropical forests and atmospheric carbon dioxide
inferredcites →https://doi.org/10.1016/s0378-1127(03)00277-9openalex-snapshot
Light, temperature, and soil moisture responses to elevation, evergreen understory, and small canopy gaps in the southern Appalachians
inferredcites →https://doi.org/10.1016/s0378-1127(99)00296-0openalex-snapshot
Impacts of forest management on northern forest soils
inferredcites →https://doi.org/10.1016/s1001-0742(11)60846-2openalex-snapshot
A review of diversity-stability relationship of soil microbial community: What do we not know?
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State of the World's Forests, 2001.Food and Agricultural Organization
inferredcites →https://doi.org/10.1038/ismej.2011.95openalex-snapshot
Active and total microbial communities in forest soil are largely different and highly stratified during decomposition
inferredcites →https://doi.org/10.1038/ismej.2012.84openalex-snapshot
Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests
inferredcites →https://doi.org/10.1038/ismej.2015.57openalex-snapshot
Forest harvesting reduces the soil metagenomic potential for biomass decomposition
inferredcites →https://doi.org/10.1038/ismej.2016.184openalex-snapshot
Shift in fungal communities and associated enzyme activities along an age gradient of managed Pinus sylvestris stands
inferredcites →https://doi.org/10.1038/nature03288openalex-snapshot
Functional cartography of complex metabolic networks
inferredcites →https://doi.org/10.1038/nmeth.f.303openalex-snapshot
QIIME allows analysis of high-throughput community sequencing data
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Functional organization of the transcriptome in human brain
inferredcites →https://doi.org/10.1038/s41396-017-0027-3openalex-snapshot
Clearcutting alters decomposition processes and initiates complex restructuring of fungal communities in soil and tree roots
inferredcites →https://doi.org/10.1046/j.1351-0754.2003.0555.xopenalex-snapshot
Ericoid mycorrhiza: a partnership that exploits harsh edaphic conditions
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The modularity of pollination networks
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An analysis of trehalose, glycerol, and mannitol accumulation during heat and salt stress in a salt marsh isolate ofAureobasidium pullulans
inferredcites →https://doi.org/10.1093/bioinformatics/btr381openalex-snapshot
UCHIME improves sensitivity and speed of chimera detection
inferredcites →https://doi.org/10.1093/bioinformatics/btv401openalex-snapshot
Error filtering, pair assembly and error correction for next-generation sequencing reads
inferredcites →https://doi.org/10.1111/1365-2435.12677openalex-snapshot
Mycorrhizal and saprotrophic fungal guilds compete for the same organic substrates but affect decomposition differently
inferredcites →https://doi.org/10.1111/1462-2920.12559openalex-snapshot
Network analysis reveals that bacteria and fungi form modules that correlate independently with soil parameters
inferredcites →https://doi.org/10.1111/ele.12109openalex-snapshot
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inferredcites →https://doi.org/10.1111/ele.12631openalex-snapshot
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inferredcites →https://doi.org/10.1111/j.1365-2435.2008.01402.xopenalex-snapshot
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inferredcites →https://doi.org/10.1111/j.1365-2486.2007.01313.xopenalex-snapshot
Plant species richness, elevated CO2, and atmospheric nitrogen deposition alter soil microbial community composition and function
inferredcites →https://doi.org/10.1111/j.1365-2745.2001.00615.xopenalex-snapshot
Habitat associations of trees and shrubs in a 50-ha neotropical forest plot
inferredcites →https://doi.org/10.1111/j.1462-2920.2009.02008.xopenalex-snapshot
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inferredcites →https://doi.org/10.1111/j.1469-8137.2006.01936.xopenalex-snapshot
Spatial separation of litter decomposition and mycorrhizal nitrogen uptake in a boreal forest
inferredcites →https://doi.org/10.1111/j.1469-8137.2007.01984.xopenalex-snapshot
Evidence that saprotrophic fungi mobilise carbon and mycorrhizal fungi mobilise nitrogen during litter decomposition
inferredcites →https://doi.org/10.1111/j.1469-8137.2009.03160.xopenalex-snapshot
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inferredcites →https://doi.org/10.1111/j.1574-6941.2003.tb01089.xopenalex-snapshot
Effect of bulk density on the spatial organisation of the fungus Rhizoctonia solani in soil
inferredcites →https://doi.org/10.1111/nph.12139openalex-snapshot
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inferredcites →https://doi.org/10.1111/nph.13201openalex-snapshot
Ectomycorrhizal fungi – potential organic matter decomposers, yet not saprotrophs
inferredcites →https://doi.org/10.1111/nph.13208openalex-snapshot
Carbon sequestration is related to mycorrhizal fungal community shifts during long‐term succession in boreal forests
inferredcites →https://doi.org/10.1111/nph.13546openalex-snapshot
Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete H ebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis
inferredcites →https://doi.org/10.1128/aem.01541-09openalex-snapshot
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inferredcites →https://doi.org/10.1128/aem.02188-07openalex-snapshot
Root Exudates Regulate Soil Fungal Community Composition and Diversity
inferredcites →https://doi.org/10.1128/mbio.00122-11openalex-snapshot
Phylogenetic Molecular Ecological Network of Soil Microbial Communities in Response to Elevated CO 2
inferredcites →https://doi.org/10.1139/b89-005openalex-snapshot
Pure culture response of ectomycorrhizal fungi to imposed water stress
inferredcites →https://doi.org/10.1139/f01-004openalex-snapshot
Permutation tests for univariate or multivariate analysis of variance and regression
inferredcites →https://doi.org/10.1186/1471-2105-13-113openalex-snapshot
Molecular ecological network analyses
inferredcites →https://doi.org/10.1186/1471-2180-10-189openalex-snapshot
ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases
inferredcites →https://doi.org/10.1186/1752-0509-1-54openalex-snapshot
Eigengene networks for studying the relationships between co-expression modules
inferredcites →https://doi.org/10.1371/journal.pone.0066829openalex-snapshot
Forest Age and Plant Species Composition Determine the Soil Fungal Community Composition in a Chinese Subtropical Forest
inferredcites →https://doi.org/10.1371/journal.pone.0204445openalex-snapshot
Temporal dynamics in animal community assembly during post-logging succession in boreal forest
inferredcites →https://doi.org/10.1890/0012-9658(2001)082[3285:mopscr]2.0.co;2openalex-snapshot
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inferredcites →https://doi.org/10.2307/1929010openalex-snapshot
Soil Temperature as Influenced by Altitude and Slope Exposure
inferredcites →https://doi.org/10.2307/3545614openalex-snapshot
Respiration and Nutrient Release from Tree Leaf Litter Mixtures
inferredcites →https://doi.org/10.2307/3761772openalex-snapshot
An Analysis of Trehalose, Glycerol, and Mannitol Accumulation during Heat and Salt Stress in a Salt Marsh Isolate of Aureobasidium pullulans
inferredcites →https://doi.org/10.3390/f9010040openalex-snapshot
Variability after 15 Years of Vegetation Recovery in Natural Secondary Forest with Timber Harvesting at Different Intensities in Southeastern China: Community Diversity and Stability

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1002/ldr.3757openalex-snapshot
Forest conversion alters the structure and functional processes of tropical forest soil microbial communities
inferred← citeshttps://doi.org/10.1002/ldr.4892openalex-snapshot
Soil bacterial community and ecosystem multifunctionality regulated by keystone plant species during secondary succession
inferred← citeshttps://doi.org/10.1002/mbo3.874openalex-snapshot
Broad‐leaved forest types affect soil fungal community structure and soil organic carbon contents
inferred← citeshttps://doi.org/10.1002/sae2.12072openalex-snapshot
Phosphorus addition predominantly influences the soil fungal community and functional guilds in a subtropical mountain forest
inferred← citeshttps://doi.org/10.1007/s11104-019-04184-wopenalex-snapshot
Soil fungal communities vary with invasion by the exotic Spartina alternifolia Loisel. in coastal salt marshes of eastern China
inferred← citeshttps://doi.org/10.1016/j.apsoil.2025.106583openalex-snapshot
Impacts of logging disturbance on soil dynamics and fungal communities in Cherul Forest Reserve, Terengganu
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Old growth forests: A blueprint for restoring mycorrhizal fungi in second-growth and thinned coast redwood (Sequoia sempervirens) stands
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Drivers of β-diversity and its component-dependence along the natural restoration in an extremely heterogeneous forest ecosystem
inferred← citeshttps://doi.org/10.1016/j.foreco.2019.117456openalex-snapshot
Temporal dynamics of soil fungal communities after partial and total clear-cutting in a managed Pinus sylvestris stand
inferred← citeshttps://doi.org/10.1016/j.foreco.2020.117920openalex-snapshot
Effects of thinning on soil saprotrophic and ectomycorrhizal fungi in a Korean larch plantation
inferred← citeshttps://doi.org/10.1016/j.foreco.2021.119182openalex-snapshot
Interkingdom plant-microbial ecological networks under selective and clear cutting of tropical rainforest
inferred← citeshttps://doi.org/10.1016/j.foreco.2021.119391openalex-snapshot
Survey of macrofungal diversity and analysis of edaphic factors influencing the fungal community of church forests in Dry Afromontane areas of Northern Ethiopia
inferred← citeshttps://doi.org/10.1016/j.foreco.2024.121810openalex-snapshot
Long-term effects of different harvesting intensities on soil microbial communities in a hardwood temperate forest
inferred← citeshttps://doi.org/10.1016/j.geoderma.2020.114505openalex-snapshot
Tropical rainforest conversion into rubber plantations results in changes in soil fungal composition, but underling mechanisms of community assembly remain unchanged
inferred← citeshttps://doi.org/10.1016/j.gloplacha.2024.104425openalex-snapshot
Differences in soil fungal communities under salinity gradients in arid and semiarid regions
inferred← citeshttps://doi.org/10.1016/j.rhisph.2026.101419openalex-snapshot
Context-dependent belowground responses of fungal communities to shelterwood management along an environmental gradient in mixed Nothofagus forests
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2019.07.354openalex-snapshot
Significant alterations in soil fungal communities along a chronosequence of Spartina alterniflora invasion in a Chinese Yellow Sea coastal wetland
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2022.153565openalex-snapshot
Plant diversity and soil properties regulate the microbial community of monsoon evergreen broad-leaved forest under different intensities of woodland use
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.168628openalex-snapshot
Spatially-explicit effects of small-scale clear-cutting on soil fungal communities in Pinus sylvestris stands
inferred← citeshttps://doi.org/10.1016/j.soilbio.2020.108010openalex-snapshot
Divergent above- and below-ground responses of fungal functional groups to forest thinning
inferred← citeshttps://doi.org/10.1080/00275514.2022.2115284openalex-snapshot
Diversity and distribution of tropical ectomycorrhizal fungi
inferred← citeshttps://doi.org/10.1111/1365-2664.13976openalex-snapshot
Drivers of soil microbial community assembly during recovery from selective logging and clear‐cutting
inferred← citeshttps://doi.org/10.1111/btp.12888openalex-snapshot
Clearcutting and selective logging have inconsistent effects on liana diversity and abundance but not on liana–tree interaction networks
inferred← citeshttps://doi.org/10.1111/gcb.70457openalex-snapshot
Plant Functional Traits Define Microbial Response to Nutrient Availability in Tropical Rainforest Soil
inferred← citeshttps://doi.org/10.1111/nph.18307openalex-snapshot
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inferred← citeshttps://doi.org/10.1146/annurev-ecolsys-110421-102327openalex-snapshot
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The effects of Bidens alba invasion on soil bacterial communities across different coastal ecosystem land-use types in southern China
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The Effects of Restoration Thinning on Arbuscular and Ectomycorrhizal Fungi in Coast Redwood (Sequoia Sempervirens) Stands
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Species Richness, Morphological Features and Inventory of Wild Macrofungi found in Akwa Ibom State, Nigeria
inferred← citeshttps://doi.org/10.3389/fmicb.2019.02226openalex-snapshot
Forest Soil Fungal Community Elevational Distribution Pattern and Their Ecological Assembly Processes
inferred← citeshttps://doi.org/10.3389/fmicb.2020.01953openalex-snapshot
Regional-Scale In-Depth Analysis of Soil Fungal Diversity Reveals Strong pH and Plant Species Effects in Northern Europe
inferred← citeshttps://doi.org/10.3389/fmicb.2020.594284openalex-snapshot
Soil Salinity Drives the Distribution Patterns and Ecological Functions of Fungi in Saline-Alkali Land in the Yellow River Delta, China
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Beyond one-size-fits-all approach: How do various harvesting strategies shape soil microbial diversity in Larix gmelinii (Daxinganling larch) forests of the Greater Khingan Mountains?
inferred← citeshttps://doi.org/10.3389/fpls.2023.1136418openalex-snapshot
Diversity and assembly of root-associated microbiomes of rubber trees
inferred← citeshttps://doi.org/10.3390/agronomy13041036openalex-snapshot
Plant Rhizospheres Harbour Specific Fungal Groups and Form a Stable Co-Occurrence Pattern in the Saline-Alkali Soil
inferred← citeshttps://doi.org/10.3390/f11101109openalex-snapshot
Soil Fungal Communities under Pinus patula Schiede ex Schltdl. & Cham. Plantation Forests of Different Ages in Ethiopia
inferred← citeshttps://doi.org/10.3390/f12030353openalex-snapshot
Similarities and Differences among Soil Fungal Assemblages in Managed Forests and Formerly Managed Forest Reserves
inferred← citeshttps://doi.org/10.3390/f13081167openalex-snapshot
Interkingdom Plant–Soil Microbial Ecological Network Analysis under Different Anthropogenic Impacts in a Tropical Rainforest
inferred← citeshttps://doi.org/10.3390/f14050862openalex-snapshot
Responses of Soil Microbial Diversity to Forest Management Practices after Pine Wilt Disease Infection
inferred← citeshttps://doi.org/10.3390/microorganisms14030685openalex-snapshot
How Does Woodland Use Affect the Multifunctionality of Soil Ecosystems?
inferred← citeshttps://doi.org/10.35376/10324/51840openalex-snapshot
Fungal communities associated with forests in the Afromontane region of Ethiopia
inferred← citeshttps://doi.org/10.36808/if/2025/v151i2/170371openalex-snapshot
Diversity and Distribution of Macrofungi in some Sacred Groves of Bankura District, West Bengal, India
inferred← citeshttps://doi.org/10.4257/oeco.2019.2303.07openalex-snapshot
DISRUPTION AND RECOVERY OF BACTERIAL COMMUNITY STRUCTURE OF AN ATLANTIC FOREST SOIL AFTER EXPOSURE TO GASOHOL
inferred← citeshttps://doi.org/10.5194/soil-2021-98-ac1openalex-snapshot
Reply on RC1
inferred← citeshttps://doi.org/10.5194/soil-2021-98-ac2openalex-snapshot
Reply on RC2
inferred← citeshttps://doi.org/10.5194/soil-2021-98-rc1openalex-snapshot
Comment on soil-2021-98
inferred← citeshttps://doi.org/10.5194/soil-8-149-2022openalex-snapshot
Network complexity of rubber plantations is lower than tropical forests for soil bacteria but not for fungi
inferred← citeshttps://doi.org/10.53043/2320-1991.acb90030openalex-snapshot
Species Richness, Morphological Features and Inventory of Wild Macrofungi found in Akwa Ibom State, Nigeria
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Ethnomycology of Yayo Coffee Forest Biosphere Reserve, southwest Ethiopia
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