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Network analysis reveals that bacteria and fungi form modules that correlate independently with soil parameters

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Numerical analysis of bacterial transport in saturated porous media

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Spatial Homogeneity of Abundant Bacterial 16S rRNA Molecules in Grassland Soils

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Fungal control of nitrous oxide production in semiarid grassland

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Chloroform fumigation and the release of soil nitrogen: A rapid direct extraction method to measure microbial biomass nitrogen in soil

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An extraction method for measuring soil microbial biomass C

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Measurement of soil microbial biomass C by fumigation-extraction—an automated procedure

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AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS

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Pasture management clearly affects soil microbial community structure and N-cycling bacteria

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Habitat selective factors influencing the structural composition and functional capacity of microbial communities in agricultural soils

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Woodland trees modulate soil resources and conserve fungal diversity in fragmented landscapes

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Loss of low molecular weight dissolved organic carbon (DOC) and nitrogen (DON) in H2O and 0.5 M K2SO4 soil extracts

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Fungi mediate long term sequestration of carbon and nitrogen in soil through their priming effect

inferredcites →https://doi.org/10.1016/j.soilbio.2011.03.012openalex-snapshot

The under-recognized dominance of Verrucomicrobia in soil bacterial communities

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Tropical agricultural land management influences on soil microbial communities through its effect on soil organic carbon

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Simple method to enable the high resolution determination of total free amino acids in soil solutions and soil extracts

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Using network analysis to explore co-occurrence patterns in soil microbial communities

inferredcites →https://doi.org/10.1038/ismej.2011.95openalex-snapshot

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition

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Monthly to interannual variability of microbial eukaryote assemblages at four depths in the eastern North Pacific

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Strong coupling of plant and fungal community structure across western Amazonian rainforests

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Microbial community structure and its functional implications

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The role of ecological theory in microbial ecology

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Characterization and analysis of soils using mid-infrared partial least-squares .2. Correlations with some laboratory data

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Phylogenetic signal in plant pathogen–host range

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Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses.

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A rapid and simple field test for phosphorus in Olsen and Bray No. 1 extracts of soil

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Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

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Niche differentiation of ammonia oxidizers and nitrite oxidizers in rice paddy soil

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Microbial communities along biogeochemical gradients in a hydrocarbon‐contaminated aquifer

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Identification of biomass utilizing bacteria in a carbon‐depleted glacier forefield soil by the use of 13 C DNA stable isotope probing

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Microbial community responses to anthropogenically induced environmental change: towards a systems approach

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ITS primers with enhanced specificity for basidiomycetes ‐ application to the identification of mycorrhizae and rusts

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Experimental evidence for a phylogenetic Janzen–Connell effect in a subtropical forest

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Abiotic drivers and plant traits explain landscape‐scale patterns in soil microbial communities

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Relationship between assemblages of mycorrhizal fungi and bacteria on grass roots

inferredcites →https://doi.org/10.1111/j.1574-6941.2011.01105.xopenalex-snapshot

The influence of sampling strategies and spatial variation on the detected soil bacterial communities under three different land-use types

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P eak S tudio: a tool for the visualization and analysis of fragment analysis files

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Reconstructing the Microbial Diversity and Function of Pre-Agricultural Tallgrass Prairie Soils in the United States

inferredcites →https://doi.org/10.1128/aem.01325-12openalex-snapshot

Environmental Factors Affect Acidobacterial Communities below the Subgroup Level in Grassland and Forest Soils

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Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA

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Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA

inferredcites →https://doi.org/10.1128/aem.71.7.4117-4120.2005openalex-snapshot

Assessment of Soil Microbial Community Structure by Use of Taxon-Specific Quantitative PCR Assays

inferredcites →https://doi.org/10.1128/aem.72.3.1719-1728.2006openalex-snapshot

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inferredcites →https://doi.org/10.1128/mbio.00078-11openalex-snapshot

Prion Disease Blood Test Using Immunoprecipitation and Improved Quaking-Induced Conversion

inferredcites →https://doi.org/10.1128/mbio.00122-11openalex-snapshot

Phylogenetic Molecular Ecological Network of Soil Microbial Communities in Response to Elevated CO 2

inferredcites →https://doi.org/10.1139/w06-015openalex-snapshot

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inferredcites →https://doi.org/10.1186/1471-2105-8-22openalex-snapshot

Gene network interconnectedness and the generalized topological overlap measure

inferredcites →https://doi.org/10.1186/1471-2105-9-559openalex-snapshot

WGCNA: an R package for weighted correlation network analysis

inferredcites →https://doi.org/10.1186/1752-0509-1-24openalex-snapshot

Understanding network concepts in modules

inferredcites →https://doi.org/10.1186/1752-0509-1-4openalex-snapshot

Qualitative networks: a symbolic approach to analyze biological signaling networks

inferredcites →https://doi.org/10.1371/journal.pone.0028438openalex-snapshot

Correlation Network Analysis Applied to Complex Biofilm Communities

inferredcites →https://doi.org/10.1641/b580907openalex-snapshot

Fungal Community Ecology: A Hybrid Beast with a Molecular Master

inferredcites →https://doi.org/10.2134/agronmonogr9.2.2ed.c24openalex-snapshot

Phosphorus

inferredcites →https://doi.org/10.2136/sssabookser5.3.c38openalex-snapshot

Nitrogen—Inorganic Forms

inferredcites →https://doi.org/10.2136/sssaj2002.1540openalex-snapshot

Evidence for Fungal Dominance of Denitrification and Codenitrification in a Grassland Soil

inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot

R: A Language and Environment for Statistical Computing

inferredcites →https://doi.org/10.3852/10-388openalex-snapshot

95 % of basidiospores fall within 1 m of the cap: a field-and modeling-based study

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1016/j.jhazmat.2021.127164openalex-snapshot

Metal(loid)s diffusion pathway triggers distinct microbiota responses in key regions of typical karst non-ferrous smelting assembly

inferred← citeshttps://doi.org/10.1016/j.jia.2024.09.019openalex-snapshot

Host preferences of root-associated fungi and their responses to decadal nitrogen and fungicide applications in an alpine pasture ecosystem

inferred← citeshttps://doi.org/10.1016/j.mib.2017.03.007openalex-snapshot

Upscaling of fungal–bacterial interactions: from the lab to the field

inferred← citeshttps://doi.org/10.1016/j.mib.2017.06.006openalex-snapshot

Linking fungal–bacterial co-occurrences to soil ecosystem function

inferred← citeshttps://doi.org/10.1016/j.pedsph.2023.07.004openalex-snapshot

Organic-inorganic fertilization promotes paddy soil macroaggregate organic carbon accumulation associated with key bacterial populations in subtropical China

inferred← citeshttps://doi.org/10.1016/j.pedsph.2023.12.016openalex-snapshot

Long-term conservation tillage changes the diversity, assembly and network stability of soil diazotrophic community

inferred← citeshttps://doi.org/10.1016/j.pestbp.2026.107111openalex-snapshot

Coinoculation with Bacillus mojavensis BA23 and Rhizobium indicum RH64 protects red kidney bean from root rot by activating plant systemic defense-related responses and modulating the rhizosphere microbial community

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2018.06.240openalex-snapshot

Distinct biogeographic patterns of rhizobia and non-rhizobial endophytes associated with soybean nodules across China

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2020.142769openalex-snapshot

Desalinization via freshwater restoration highly improved microbial diversity, co-occurrence patterns and functions in coastal wetland soils

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.145753openalex-snapshot

Microbial community responses to land-use types and its ecological roles in mining area

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.147046openalex-snapshot

Seasonal succession of microbes in different size-fractions and their modular structures determined by both macro- and micro-environmental filtering in dynamic coastal waters

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.147131openalex-snapshot

A Soilscape Network Approach (SNAp) to investigate subsurface phosphorus translocation along slopes

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.151571openalex-snapshot

Characteristics of prokaryotic and fungal communities emerged in eco-engineered waste rock – Eucalyptus open woodlands at Ranger uranium mine

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.152565openalex-snapshot

Soil microbial co-occurrence networks become less connected with soil development in a high Arctic glacier foreland succession

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2022.154302openalex-snapshot

Regulation of soil micro-foodwebs to root secondary metabolites in cultivated and wild licorice plants

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2022.156202openalex-snapshot

Characterization of soil microbial community activity and structure for reducing available Cd by rice straw biochar and Bacillus cereus RC-1

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2022.157119openalex-snapshot

Responses of soil fungal taxonomic attributes and enzyme activities to copper and cadmium co-contamination in paddy soils

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2022.159459openalex-snapshot

Soil microbial community structure dynamics shape the rhizosphere priming effect patterns in the paddy soil

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.164841openalex-snapshot

Incomplete recovery of gut microbiota in marine medaka (Oryzias melastigma) during the depuration phase, after exposure to sulfamethazine/nanoplastics

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.165056openalex-snapshot

Soil core microbiota drive community resistance to mercury stress and maintain functional stability

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.166169openalex-snapshot

Anthropogenic original DOM is a critical factor affecting LNA bacterial community assembly

inferred← citeshttps://doi.org/10.1016/j.seppur.2025.133923openalex-snapshot

Effects of polypropylene nanoplastics on nitrogen removal, microbial communities and microbial metabolic pathways in biological nitrogen removal processes

inferred← citeshttps://doi.org/10.1016/j.soilbio.2014.10.008openalex-snapshot

Microbial community structure mediates response of soil C decomposition to litter addition and warming

inferred← citeshttps://doi.org/10.1016/j.soilbio.2015.02.036openalex-snapshot

Soil nitrogen pools and turnover in native woodland and managed pasture soils

inferred← citeshttps://doi.org/10.1016/j.soilbio.2016.09.006openalex-snapshot

Ecology of the forest microbiome: Highlights of temperate and boreal ecosystems

inferred← citeshttps://doi.org/10.1016/j.soilbio.2017.01.027openalex-snapshot

Wildfire impact: Natural experiment reveals differential short-term changes in soil microbial communities

inferred← citeshttps://doi.org/10.1016/j.soilbio.2017.02.010openalex-snapshot

Plant cultivars imprint the rhizosphere bacterial community composition and association networks

inferred← citeshttps://doi.org/10.1016/j.soilbio.2017.12.011openalex-snapshot

Co-occurrence patterns of soybean rhizosphere microbiome at a continental scale

inferred← citeshttps://doi.org/10.1016/j.soilbio.2020.108047openalex-snapshot

Crop production correlates with soil multitrophic communities at the large spatial scale

inferred← citeshttps://doi.org/10.1016/j.soilbio.2021.108349openalex-snapshot

Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses

inferred← citeshttps://doi.org/10.1016/j.soilbio.2021.108463openalex-snapshot

Eukaryotes in soil aggregates across conservation managements: Major roles of protists, fungi and taxa linkages in soil structuring and C stock

inferred← citeshttps://doi.org/10.1016/j.soilbio.2022.108671openalex-snapshot

Dynamic changes in bacterial community structure are associated with distinct priming effect patterns

inferred← citeshttps://doi.org/10.1016/j.soilbio.2022.108831openalex-snapshot

Bacterial and fungal co-occurrence patterns in agricultural soils amended with compost and bokashi

inferred← citeshttps://doi.org/10.1016/j.soilbio.2024.109317openalex-snapshot

Root acquisitive traits mirror the functional modules of root-associated fungi

inferred← citeshttps://doi.org/10.1016/j.still.2021.105169openalex-snapshot

Restriction of soil bacteria promoting high yield of super hybrid rice in the Huaihe Valley in central China by conventional ploughing intensity

inferred← citeshttps://doi.org/10.1016/j.stress.2024.100358openalex-snapshot

Interdomain ecological network analysis infers the endophytic bacteria protect against Fusarium root rot invasion

inferred← citeshttps://doi.org/10.1038/nrmicro3417openalex-snapshot

Marine microbial community dynamics and their ecological interpretation

inferred← citeshttps://doi.org/10.1038/s41396-020-00777-xopenalex-snapshot

A network approach to elucidate and prioritize microbial dark matter in microbial communities

inferred← citeshttps://doi.org/10.1038/s41396-020-00796-8openalex-snapshot

Biodiversity of key-stone phylotypes determines crop production in a 4-decade fertilization experiment

inferred← citeshttps://doi.org/10.1038/s41467-023-40810-zopenalex-snapshot

Acidification suppresses the natural capacity of soil microbiome to fight pathogenic Fusarium infections

inferred← citeshttps://doi.org/10.1038/s41522-022-00277-0openalex-snapshot

Soil microbial metabolism on carbon and nitrogen transformation links the crop-residue contribution to soil organic carbon

inferred← citeshttps://doi.org/10.1038/s41559-019-1084-yopenalex-snapshot

Multiple elements of soil biodiversity drive ecosystem functions across biomes

inferred← citeshttps://doi.org/10.1038/s41598-017-12959-3openalex-snapshot

Trios—promising in silico biomarkers for differentiating the effect of disease on the human microbiome network

inferred← citeshttps://doi.org/10.1038/s41598-019-43980-3openalex-snapshot

The role of fungi in heterogeneous sediment microbial networks

inferred← citeshttps://doi.org/10.1038/s41598-024-65678-xopenalex-snapshot

Impacts of multiple environmental factors on soil bacterial community assembly in heavy metal polluted paddy fields

inferred← citeshttps://doi.org/10.1038/s41598-025-08400-9openalex-snapshot

Impact of fermented rapeseed cake mixed Bacillus velezensis on the bacterial community structure and cultivation of tobacco cultivar K326

inferred← citeshttps://doi.org/10.1080/12298093.2025.2494891openalex-snapshot

Use of Ecological Networks to Reveal Interspecific Fungal Interactions from 150 Years of Foray Records

inferred← citeshttps://doi.org/10.1093/femsec/fiaa137openalex-snapshot

Mutual environmental drivers of the community composition, functional attributes and co-occurrence patterns of bacterioplankton in the composite aquatic ecosystem of Taihu watershed in China

inferred← citeshttps://doi.org/10.1093/femsec/fiw217openalex-snapshot

Anin situinventory of fungi and their associated migrating bacteria in forest soils using fungal highway columns

inferred← citeshttps://doi.org/10.1093/femsec/fiy051openalex-snapshot

Earthworm-induced shifts in microbial diversity in soils with rare versus established invasive earthworm populations

inferred← citeshttps://doi.org/10.1093/femsre/fuy008openalex-snapshot

Bacterial–fungal interactions: ecology, mechanisms and challenges

inferred← citeshttps://doi.org/10.1093/femsre/fuy030openalex-snapshot

From hairballs to hypotheses–biological insights from microbial networks

inferred← citeshttps://doi.org/10.1093/ismeco/ycae022openalex-snapshot

Changes in bacterial communities during rice cultivation remove phenolic constraints on peatland carbon preservation

inferred← citeshttps://doi.org/10.1099/mic.0.000341openalex-snapshot

The soil microbiome at the Gi-FACE experiment responds to a moisture gradient but not to CO2 enrichment

inferred← citeshttps://doi.org/10.1101/050005openalex-snapshot

New insights in host-associated microbial diversity with broad and accurate taxonomic resolution

inferred← citeshttps://doi.org/10.1101/2020.02.03.933325openalex-snapshot

Polar opposites; bacterioplankton susceptibility and mycoplankton resistance to ocean acidification

inferred← citeshttps://doi.org/10.1101/2020.07.10.198234openalex-snapshot

Enhanced metabolic potentials and functional gene interactions of microbial stress response towards high elevation in freshwater lakes

inferred← citeshttps://doi.org/10.1101/2024.01.17.575995openalex-snapshot

The Role of Rhizosphere Microorganisms and CNPS Genes in Shaping Nutritional Traits of Capsicum

inferred← citeshttps://doi.org/10.1111/1462-2920.12986openalex-snapshot

Determinants of bacterial communities in C anadian agroforestry systems

inferred← citeshttps://doi.org/10.1111/1462-2920.14004openalex-snapshot

Localized high abundance of Marine Group II archaea in the subtropical Pearl River Estuary: implications for their niche adaptation

inferred← citeshttps://doi.org/10.1111/1462-2920.15315openalex-snapshot

Environment dependent microbial co‐occurrences across a cyanobacterial bloom in a freshwater lake

inferred← citeshttps://doi.org/10.1111/1462-2920.15333openalex-snapshot

High soil pH enhances the network interactions among bacterial and archaeal microbiota in alpine grasslands of the Tibetan Plateau

inferred← citeshttps://doi.org/10.1111/1462-2920.16442openalex-snapshot

Arsenic pollution from human activities drives changes in soil microbial community characteristics

inferred← citeshttps://doi.org/10.1111/1755-0998.13408openalex-snapshot

Obtaining deeper insights into microbiome diversity using a simple method to block host and nontargets in amplicon sequencing

inferred← citeshttps://doi.org/10.1111/gcb.14995openalex-snapshot

Microbial resistance and resilience in response to environmental changes under the higher intensity of human activities than global average level

inferred← citeshttps://doi.org/10.1111/geb.13317openalex-snapshot

Phylogenetic relatedness drives protist assembly in marine and terrestrial environments

inferred← citeshttps://doi.org/10.1111/jam.13544openalex-snapshot

Use of microbial indicators combined with environmental factors coupled with metrology tools for discrimination and classification ofLuzhou-flavoured pit muds

inferred← citeshttps://doi.org/10.1111/mec.14428openalex-snapshot

Fungal community reveals less dispersal limitation and potentially more connected network than that of bacteria in bamboo forest soils

inferred← citeshttps://doi.org/10.1126/science.aap9516openalex-snapshot

A global atlas of the dominant bacteria found in soil

inferred← citeshttps://doi.org/10.1128/aem.00001-24openalex-snapshot

Soil fungal community has higher network stability than bacterial community in response to warming and nitrogen addition in a subtropical primary forest

inferred← citeshttps://doi.org/10.1128/aem.00004-18openalex-snapshot

Structural Variation in the Bacterial Community Associated with Airborne Particulate Matter in Beijing, China, during Hazy and Nonhazy Days

inferred← citeshttps://doi.org/10.1128/aem.00067-15openalex-snapshot

C/N Ratio Drives Soil Actinobacterial Cellobiohydrolase Gene Diversity

inferred← citeshttps://doi.org/10.1128/aem.03409-15openalex-snapshot

Illuminating Anaerobic Microbial Community and Cooccurrence Patterns across a Quality Gradient in Chinese Liquor Fermentation Pit Muds

inferred← citeshttps://doi.org/10.1128/msystems.01252-23openalex-snapshot

Multi-omics analysis reveals the associations between altered gut microbiota, metabolites, and cytokines during pregnancy

inferred← citeshttps://doi.org/10.1134/s1062359025613874openalex-snapshot

Effects of Asarum sieboldii Miq. Monoculture and Its Subsequent Abandonment on Soil Properties, Bacterial Community Assembly, and Functional Potential in Forest Understories

inferred← citeshttps://doi.org/10.1146/annurev-phyto-021021-041457openalex-snapshot

More Than the Sum of Its Parts: Unlocking the Power of Network Structure for Understanding Organization and Function in Microbiomes

inferred← citeshttps://doi.org/10.1186/s12866-022-02648-1openalex-snapshot

The rhizosphere bacterial community contributes to the nutritional competitive advantage of weedy rice over cultivated rice in paddy soil

inferred← citeshttps://doi.org/10.1186/s12866-023-03170-8openalex-snapshot

Core microbiota drive multi-functionality of the soil microbiome in the Cinnamomum camphora coppice planting

inferred← citeshttps://doi.org/10.1186/s13213-022-01699-zopenalex-snapshot

Effects of tobacco plant residue return on rhizosphere soil microbial community

inferred← citeshttps://doi.org/10.1186/s40168-018-0572-7openalex-snapshot

Consistent responses of soil microbial taxonomic and functional attributes to mercury pollution across China

inferred← citeshttps://doi.org/10.1186/s40168-019-0693-7openalex-snapshot

Competitive interaction with keystone taxa induced negative priming under biochar amendments

inferred← citeshttps://doi.org/10.1186/s40793-022-00420-6openalex-snapshot

Beyond the snapshot: identification of the timeless, enduring indicator microbiome informing soil fertility and crop production in alkaline soils

inferred← citeshttps://doi.org/10.1186/s40793-023-00498-6openalex-snapshot

Vegetation as a key driver of the distribution of microbial generalists that in turn shapes the overall microbial community structure in the low Arctic tundra

inferred← citeshttps://doi.org/10.1186/s40793-025-00817-zopenalex-snapshot

Cyanobacteria sustain microbial diversity and community stability in Tibetan glacial cryoconites

inferred← citeshttps://doi.org/10.1371/journal.pone.0256321openalex-snapshot

Environmental factors shaping bacterial, archaeal and fungal community structure in hydrothermal sediments of Guaymas Basin, Gulf of California

inferred← citeshttps://doi.org/10.1371/journal.pone.0327961openalex-snapshot

Zinc ion increases the effectiveness of phosphorus in agricultural soils through microbial solubilization

inferred← citeshttps://doi.org/10.18307/2018.0510openalex-snapshot

The response relationship between nitrogen and aerobic methanotrophs in sediment of urban river, Beijing, China

inferred← citeshttps://doi.org/10.18307/2022.0601openalex-snapshot

Principle and application of co-occurrence networks for freshwater ecosystem assessment

inferred← citeshttps://doi.org/10.21203/rs.2.18880/v1openalex-snapshot

Increasing soil pH enhances the network interactions among bacterial and archaeal microbiota in alpine grasslands of the Tibetan Plateau

inferred← citeshttps://doi.org/10.21203/rs.3.rs-1130238/v1openalex-snapshot

Organic Matter Decomposition in River Ecosystems: the Role of Microbial Interactions Regulated by Environmental Factors

inferred← citeshttps://doi.org/10.2139/ssrn.6025146openalex-snapshot

Coinoculation with Bacillus mojavensis BA23 and Rhizobium indicum RH64 protected red kidney bean from root rot by activating plant-induced systemic resistance and modulating the interroot microbial community

inferred← citeshttps://doi.org/10.2139/ssrn.6603779openalex-snapshot

Management intensity and crop type determine soil biodiversity and multifunctionality in Mediterranean tree-based agroecosystems

inferred← citeshttps://doi.org/10.25148/etd.fidc007798openalex-snapshot

Effects of Phosphorus on Benthic Diatom Assemblage Network Structure

inferred← citeshttps://doi.org/10.3389/ffgc.2026.1905473openalex-snapshot

Six-year nitrogen addition alters microbial-derived carbon accumulation in association with soil stoichiometry and microbial community reorganization in an alpine coniferous forest

inferred← citeshttps://doi.org/10.3389/fmicb.2016.00720openalex-snapshot

Inoculant of Arbuscular Mycorrhizal Fungi (Rhizophagus clarus) Increase Yield of Soybean and Cotton under Field Conditions

inferred← citeshttps://doi.org/10.3389/fmicb.2019.02181openalex-snapshot

Conservation of Endophyte Bacterial Community Structure Across Two Panicum Grass Species

inferred← citeshttps://doi.org/10.3389/fmicb.2020.00192openalex-snapshot

Sowing Methods Influence Soil Bacterial Diversity and Community Composition in a Winter Wheat-Summer Maize Rotation System on the Loess Plateau

inferred← citeshttps://doi.org/10.3389/fmicb.2020.01021openalex-snapshot

Bacterial Communities in Stream Biofilms in a Degrading Grassland Watershed on the Qinghai–Tibet Plateau

inferred← citeshttps://doi.org/10.3389/fmicb.2020.01261openalex-snapshot

Can We Use Functional Genetics to Predict the Fate of Nitrogen in Estuaries?

inferred← citeshttps://doi.org/10.3389/fmicb.2020.595967openalex-snapshot

Enhanced Metabolic Potentials and Functional Gene Interactions of Microbial Stress Responses to a 4,100-m Elevational Increase in Freshwater Lakes

inferred← citeshttps://doi.org/10.3389/fmicb.2021.664120openalex-snapshot

The Impact of Fertilizer Amendments on Soil Autotrophic Bacteria and Carbon Emissions in Maize Field on the Semiarid Loess Plateau

inferred← citeshttps://doi.org/10.3389/fmicb.2021.713523openalex-snapshot

Dispersal Limitation Plays Stronger Role in the Community Assembly of Fungi Relative to Bacteria in Rhizosphere Across the Arable Area of Medicinal Plant

inferred← citeshttps://doi.org/10.3389/fmicb.2021.716732openalex-snapshot

Bacterial Communities Present Distinct Co-occurrence Networks in Sediment and Water of the Thermokarst Lakes in the Yellow River Source Area

inferred← citeshttps://doi.org/10.3389/fmicb.2021.722626openalex-snapshot

Fungi-Bacteria Associations in Wilt Diseased Rhizosphere and Endosphere by Interdomain Ecological Network Analysis

inferred← citeshttps://doi.org/10.3389/fmicb.2022.1067939openalex-snapshot

The moderate substitution of Astragalus sinicus returning for chemical fertilizer improves the N cycle function of key ecological bacterial clusters in soil

inferred← citeshttps://doi.org/10.3389/fmicb.2022.1076610openalex-snapshot

Fungi and cercozoa regulate methane-associated prokaryotes in wetland methane emissions

inferred← citeshttps://doi.org/10.3389/fmicb.2022.840774openalex-snapshot

Weeds in the Alfalfa Field Decrease Rhizosphere Microbial Diversity and Association Networks in the North China Plain

inferred← citeshttps://doi.org/10.3389/fmicb.2022.930622openalex-snapshot

Fallow Land Enhances Carbon Sequestration in Glomalin and Soil Aggregates Through Regulating Diversity and Network Complexity of Arbuscular Mycorrhizal Fungi Under Climate Change in Relatively High-Latitude Regions

inferred← citeshttps://doi.org/10.3389/fmicb.2023.1305345openalex-snapshot

Composition, interaction networks, and nitrogen metabolism patterns of bacterioplankton communities in a grassland type Lake: a case of Hulun Lake, China

inferred← citeshttps://doi.org/10.3389/fmicb.2024.1348680openalex-snapshot

Trichoderma harzianum prevents red kidney bean root rot by increasing plant antioxidant enzyme activity and regulating the rhizosphere microbial community

inferred← citeshttps://doi.org/10.3389/fmicb.2025.1496385openalex-snapshot

Effects of long-term continuous cropping on microbial community structure and function in tobacco rhizosphere soil

inferred← citeshttps://doi.org/10.3389/fmicb.2025.1649443openalex-snapshot

Soil microbial communities are more disrupted by extreme drought than by gradual climate shifts under different land-use intensities

inferred← citeshttps://doi.org/10.3389/fmicb.2026.1809980openalex-snapshot

Metagenomic insights into the rhizosphere microbiome dysbiosis associated with tobacco bacterial wilt

inferred← citeshttps://doi.org/10.3390/agriculture13030653openalex-snapshot

Heavy Metals Influence on the Bacterial Community of Soils: A Review

inferred← citeshttps://doi.org/10.3390/agriculture15080804openalex-snapshot

Crop Cultivation Reshapes Soil Microbiomes to Drive Heavy Metal Mobilization in Restored Mining Areas

inferred← citeshttps://doi.org/10.3390/f10100863openalex-snapshot

Environmental Filtering Drives Local Soil Fungal Beta Diversity More Than Dispersal Limitation in Six Forest Types along a Latitudinal Gradient in Eastern China

inferred← citeshttps://doi.org/10.3390/f13020185openalex-snapshot

Unlocking the Changes of Phyllosphere Fungal Communities of Fishscale Bamboo (Phyllostachys heteroclada) under Rhombic-Spot Disease Stressed Conditions

inferred← citeshttps://doi.org/10.3390/f14061207openalex-snapshot

Keystone Soil Microbial Modules Associated with Priming Effect under Nitrogen- and Glucose-Addition Treatments

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