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Designer microbiomes for environmental, energy and health biotechnology

https://doi.org/10.1016/j.mib.2017.12.007

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Simultaneous COD, nitrogen, and phosphate removal by aerobic granular sludge

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Use of highly alkaline conditions to improve cost-effectiveness of algal biotechnology

inferredcites →https://doi.org/10.1007/s00792-014-0670-9openalex-snapshot

Microbial diversity and biogeochemical cycling in soda lakes

inferredcites →https://doi.org/10.1016/0963-9969(94)90097-3openalex-snapshot

Fermented foods and food safety

inferredcites →https://doi.org/10.1016/j.algal.2015.01.007openalex-snapshot

High light and carbon dioxide optimize surface productivity in a Twin-Layer biofilm photobioreactor

inferredcites →https://doi.org/10.1016/j.biortech.2012.04.073openalex-snapshot

Nannochloropsis production metrics in a scalable outdoor photobioreactor for commercial applications

inferredcites →https://doi.org/10.1016/j.celrep.2014.03.070openalex-snapshot

Metabolic Resource Allocation in Individual Microbes Determines Ecosystem Interactions and Spatial Dynamics

inferredcites →https://doi.org/10.1016/j.fuproc.2004.11.004openalex-snapshot

Improving the economics of biodiesel production through the use of low value lipids as feedstocks: vegetable oil soapstock

inferredcites →https://doi.org/10.1016/j.mib.2005.04.011openalex-snapshot

Is bioaugmentation a feasible strategy for pollutant removal and site remediation?

inferredcites →https://doi.org/10.1016/j.nbt.2016.11.005openalex-snapshot

A process for polyhydroxyalkanoate (PHA) production from municipal wastewater treatment with biological carbon and nitrogen removal demonstrated at pilot-scale

inferredcites →https://doi.org/10.1016/j.tibtech.2008.05.004openalex-snapshot

Engineering microbial consortia: a new frontier in synthetic biology

inferredcites →https://doi.org/10.1016/j.tibtech.2011.06.006openalex-snapshot

Bicarbonate produced from carbon capture for algae culture

inferredcites →https://doi.org/10.1016/j.watres.2007.03.044openalex-snapshot

Startup of reactors for anoxic ammonium oxidation: Experiences from the first full-scale anammox reactor in Rotterdam

inferredcites →https://doi.org/10.1017/s0007114513002560openalex-snapshot

Intestinal microbiota, diet and health

inferredcites →https://doi.org/10.1038/ismej.2015.162openalex-snapshot

Metagenomic reconstructions of bacterial CRISPR loci constrain population histories

inferredcites →https://doi.org/10.1038/ismej.2015.241openalex-snapshot

Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations

inferredcites →https://doi.org/10.1038/ismej.2016.175openalex-snapshot

Impacts of chemical gradients on microbial community structure

inferredcites →https://doi.org/10.1038/ismej.2016.26openalex-snapshot

Engineering microbial consortia for controllable outputs

inferredcites →https://doi.org/10.1038/ismej.2016.45openalex-snapshot

Challenges in microbial ecology: building predictive understanding of community function and dynamics

inferredcites →https://doi.org/10.1038/nature02340openalex-snapshot

Community structure and metabolism through reconstruction of microbial genomes from the environment

inferredcites →https://doi.org/10.1038/nature18297openalex-snapshot

Environmental Breviatea harbour mutualistic Arcobacter epibionts

inferredcites →https://doi.org/10.1038/nature23889openalex-snapshot

Strains, functions and dynamics in the expanded Human Microbiome Project

inferredcites →https://doi.org/10.1038/ncomms4114openalex-snapshot

Antibiotic-induced shifts in the mouse gut microbiome and metabolome increase susceptibility to Clostridium difficile infection

inferredcites →https://doi.org/10.1038/ng.3663openalex-snapshot

The effect of host genetics on the gut microbiome

inferredcites →https://doi.org/10.1038/nmicrobiol.2016.55openalex-snapshot

Phenotypic heterogeneity driven by nutrient limitation promotes growth in fluctuating environments

inferredcites →https://doi.org/10.1038/nrmicro2080openalex-snapshot

Functional analysis of natural microbial consortia using community proteomics

inferredcites →https://doi.org/10.1038/s41467-017-00531-6openalex-snapshot

A single early-in-life macrolide course has lasting effects on murine microbial network topology and immunity

inferredcites →https://doi.org/10.1038/s41467-017-01544-xopenalex-snapshot

Assessing species biomass contributions in microbial communities via metaproteomics

inferredcites →https://doi.org/10.1038/s41564-017-0012-7openalex-snapshot

Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life

inferredcites →https://doi.org/10.1073/pnas.0605127103openalex-snapshot

Microbial diversity in the deep sea and the underexplored “rare biosphere”

inferredcites →https://doi.org/10.1073/pnas.1706879114openalex-snapshot

Host modification of a bacterial quorum-sensing signal induces a phenotypic switch in bacterial symbionts

inferredcites →https://doi.org/10.1111/1462-2920.12904openalex-snapshot

Changes in secondary metabolic profiles of Microcystis aeruginosa strains in response to intraspecific interactions

inferredcites →https://doi.org/10.1111/1462-2920.13019openalex-snapshot

Metagenomic and metaproteomic analyses of Accumulibacter phosphatis‐enriched floccular and granular biofilm

inferredcites →https://doi.org/10.1111/j.1462-2920.2005.00956.xopenalex-snapshot

Quantifying the roles of immigration and chance in shaping prokaryote community structure

inferredcites →https://doi.org/10.1111/j.1574-6941.1995.tb00281.xopenalex-snapshot

Anaerobic ammonium oxidation discovered in a denitrifying fluidized bed reactor

inferredcites →https://doi.org/10.1126/science.1254070openalex-snapshot

The environmental controls that govern the end product of bacterial nitrate respiration

inferredcites →https://doi.org/10.1126/science.aaf6159openalex-snapshot

Metabolic engineering of microbial competitive advantage for industrial fermentation processes

inferredcites →https://doi.org/10.1146/annurev-micro-090816-093549openalex-snapshot

Microbiota-Based Therapies for Clostridium difficile and Antibiotic-Resistant Enteric Infections

inferredcites →https://doi.org/10.1146/annurev.micro.030608.101423openalex-snapshot

Rules of Engagement: Interspecies Interactions that Regulate Microbial Communities

inferredcites →https://doi.org/10.1186/s13068-017-0769-1openalex-snapshot

Robust, high-productivity phototrophic carbon capture at high pH and alkalinity using natural microbial communities

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/phytotaxa.397.3.2zenodo-depositor-declared

Three dominating hypocrealean fungi of the ‘white mold spots’ on acrylic varnish coatings of the murals in a Koguryo tomb in China

inferred← citeshttps://doi.org/10.1002/9781394207794.ch3openalex-snapshot

Extracellular Electron Transfer in Microbial Bioelectrocatalysis

inferred← citeshttps://doi.org/10.1002/aic.16456openalex-snapshot

Insight on the bacterial ecology in membrane bioreactor: Operational conditions effect over dominant ecological players

inferred← citeshttps://doi.org/10.1002/pmic.202400189openalex-snapshot

Metaproteomic Profiling of the Secretome of a Granule‐forming Ca. Accumulibacter Enrichment

inferred← citeshttps://doi.org/10.1007/10_2021_180openalex-snapshot

Conversion of Carbon Monoxide to Chemicals Using Microbial Consortia

inferred← citeshttps://doi.org/10.1007/s10123-026-00790-8openalex-snapshot

Microbial biotechnology meets ecological theory: a unified framework to design industrial microbial consortia

inferred← citeshttps://doi.org/10.1016/j.copbio.2021.01.017openalex-snapshot

Experimental infrastructure requirements for quantitative research on microbial communities

inferred← citeshttps://doi.org/10.1016/j.copbio.2022.102808openalex-snapshot

Microbiome-based biotechnology for reducing food loss post harvest

inferred← citeshttps://doi.org/10.1101/2022.01.07.475446openalex-snapshot

Assessing Comparative Microbiome Performance in Plant Cell Wall Deconstruction Using Multi-‘omics-Informed Network Analysis

inferred← citeshttps://doi.org/10.1101/2024.11.06.622250openalex-snapshot

Metaproteomic profiling of the secretome of a granule-forming Ca . Accumulibacter enrichment

inferred← citeshttps://doi.org/10.1186/s40168-022-01377-xopenalex-snapshot

Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction

inferred← citeshttps://doi.org/10.18174/637087openalex-snapshot

Synthetic microbial communities for syngas-driven odd-chain elongation

inferred← citeshttps://doi.org/10.3389/fmicb.2020.00867openalex-snapshot

Chemically Stressed Bacterial Communities in Anaerobic Digesters Exhibit Resilience and Ecological Flexibility

inferred← citeshttps://doi.org/10.6084/m9.figshare.21391674openalex-snapshot

Additional file 1 of Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction

inferred← citeshttps://doi.org/10.6084/m9.figshare.21391677openalex-snapshot

Additional file 2 of Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction

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