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Phylogenetics is the New Genetics (for Most of Biodiversity)
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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The Post-GWAS Era: From Association to Function
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A “Forward Genomics” Approach Links Genotype to Phenotype using Independent Phenotypic Losses among Related Species
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Gain and Loss of Floral Scent Production through Changes in Structural Genes during Pollinator-Mediated Speciation
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Genomics tools for QTL analysis and gene discovery
inferredcites →https://doi.org/10.1016/j.tig.2018.03.005openalex-snapshot
Replicability and Prediction: Lessons and Challenges from GWAS
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Inferring the historical patterns of biological evolution
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Finding the missing heritability of complex diseases
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Human-specific loss of regulatory DNA and the evolution of human-specific traits
inferredcites →https://doi.org/10.1038/ncomms5471openalex-snapshot
Latent homology and convergent regulatory evolution underlies the repeated emergence of yeasts
inferredcites →https://doi.org/10.1038/ng.2568openalex-snapshot
Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution
inferredcites →https://doi.org/10.1038/ng.2877openalex-snapshot
Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species
inferredcites →https://doi.org/10.1038/nrg3483openalex-snapshot
The genetic causes of convergent evolution
inferredcites →https://doi.org/10.1038/s41467-018-06824-8openalex-snapshot
The genetic basis of a social polymorphism in halictid bees
inferredcites →https://doi.org/10.1038/s41477-019-0486-9openalex-snapshot
Interspecies association mapping links reduced CG to TG substitution rates to the loss of gene-body methylation
inferredcites →https://doi.org/10.1038/s41559-018-0629-9openalex-snapshot
The molecular genetic basis of herbivory between butterflies and their host plants
inferredcites →https://doi.org/10.1038/s41576-019-0107-5openalex-snapshot
The genetics of convergent evolution: insights from plant photosynthesis
inferredcites →https://doi.org/10.1073/pnas.0604706103openalex-snapshot
Parallel genetic origins of pelvic reduction in vertebrates
inferredcites →https://doi.org/10.1073/pnas.1011361108openalex-snapshot
Gradual disintegration of the floral symmetry gene network is implicated in the evolution of a wind-pollination syndrome
inferredcites →https://doi.org/10.1073/pnas.1707515115openalex-snapshot
Pairwise comparisons across species are problematic when analyzing functional genomic data
inferredcites →https://doi.org/10.1073/pnas.1811268115openalex-snapshot
Quantifying the risk of hemiplasy in phylogenetic inference
inferredcites →https://doi.org/10.1073/pnas.1818532116openalex-snapshot
A functional enrichment test for molecular convergent evolution finds a clear protein-coding signal in echolocating bats and whales
inferredcites →https://doi.org/10.1073/pnas.85.23.9119openalex-snapshot
Admixture as a tool for finding linked genes and detecting that difference from allelic association between loci.
inferredcites →https://doi.org/10.1080/10635150802164587openalex-snapshot
Hemiplasy: A New Term in the Lexicon of Phylogenetics
inferredcites →https://doi.org/10.1086/284325openalex-snapshot
Phylogenies and the Comparative Method
inferredcites →https://doi.org/10.1086/663681openalex-snapshot
A Comparative Method for Both Discrete and Continuous Characters Using the Threshold Model
inferredcites →https://doi.org/10.1093/molbev/msm088openalex-snapshot
PAML 4: Phylogenetic Analysis by Maximum Likelihood
inferredcites →https://doi.org/10.1093/molbev/msq244openalex-snapshot
A Phylogenetic Model for Investigating Correlated Evolution of Substitution Rates and Continuous Phenotypic Characters
inferredcites →https://doi.org/10.1093/molbev/msq263openalex-snapshot
A Likelihood Method for Detecting Trait-Dependent Shifts in the Rate of Molecular Evolution
inferredcites →https://doi.org/10.1093/molbev/msw001openalex-snapshot
“Reverse Genomics” Predicts Function of Human Conserved Noncoding Elements
inferredcites →https://doi.org/10.1093/molbev/msw098openalex-snapshot
Controlling for Phylogenetic Relatedness and Evolutionary Rates Improves the Discovery of Associations Between Species’ Phenotypic and Genomic Differences
inferredcites →https://doi.org/10.1093/molbev/msw238openalex-snapshot
Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution
inferredcites →https://doi.org/10.1093/molbev/msy105openalex-snapshot
Biological Processes Modulating Longevity across Primates: A Phylogenetic Genome-Phenome Analysis
inferredcites →https://doi.org/10.1093/molbev/msy114openalex-snapshot
Accurate Detection of Convergent Amino-Acid Evolution with PCOC
inferredcites →https://doi.org/10.1093/molbev/msy198openalex-snapshot
Phylotranscriptomic Insights into the Diversification of EndothermicThunnusTunas
inferredcites →https://doi.org/10.1093/molbev/msz049openalex-snapshot
Bayesian Detection of Convergent Rate Changes of Conserved Noncoding Elements on Phylogenetic Trees
inferredcites →https://doi.org/10.1093/molbev/msz107openalex-snapshot
Robust Method for Detecting Convergent Shifts in Evolutionary Rates
inferredcites →https://doi.org/10.1093/sysbio/syp074openalex-snapshot
Phylogenetic Logistic Regression for Binary Dependent Variables
inferredcites →https://doi.org/10.1093/sysbio/sys086openalex-snapshot
Phylogenetic Analysis Using Lévy Processes: Finding Jumps in the Evolution of Continuous Traits
inferredcites →https://doi.org/10.1093/sysbio/syu057openalex-snapshot
A Novel Bayesian Method for Inferring and Interpreting the Dynamics of Adaptive Landscapes from Phylogenetic Comparative Data
inferredcites →https://doi.org/10.1093/sysbio/syu070openalex-snapshot
The Unsolved Challenge to Phylogenetic Correlation Tests for Categorical Characters
inferredcites →https://doi.org/10.1093/sysbio/syx032openalex-snapshot
An Integrated Model of Phenotypic Trait Changes and Site-Specific Sequence Evolution
inferredcites →https://doi.org/10.1093/sysbio/syy031openalex-snapshot
Rethinking phylogenetic comparative methods
inferredcites →https://doi.org/10.1093/sysbio/syz005openalex-snapshot
Integration of Anatomy Ontologies and Evo-Devo Using Structured Markov Models Suggests a New Framework for Modeling Discrete Phenotypic Traits
inferredcites →https://doi.org/10.1098/rstb.2018.0248openalex-snapshot
Integrating natural history collections and comparative genomics to study the genetic architecture of convergent evolution
inferredcites →https://doi.org/10.1101/gr.3715005openalex-snapshot
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
inferredcites →https://doi.org/10.1111/2041-210x.13217openalex-snapshot
phenotools: An r package for visualizing and analysing phenomic datasets
inferredcites →https://doi.org/10.1111/evo.12081openalex-snapshot
THE LOCI OF REPEATED EVOLUTION: A CATALOG OF GENETIC HOTSPOTS OF PHENOTYPIC VARIATION
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TESTING FOR DIFFERENT RATES OF CONTINUOUS TRAIT EVOLUTION USING LIKELIHOOD
inferredcites →https://doi.org/10.1111/j.1096-0031.2011.00355.xopenalex-snapshot
MorphoBank: phylophenomics in the “cloud”
inferredcites →https://doi.org/10.1111/j.1420-9101.2009.01915.xopenalex-snapshot
General quantitative genetic methods for comparative biology: phylogenies, taxonomies and multi-trait models for continuous and categorical characters
inferredcites →https://doi.org/10.1111/j.1467-985x.2010.00676_7.xopenalex-snapshot
Causality, 2nd edn
inferredcites →https://doi.org/10.1111/j.1558-5646.1997.tb01457.xopenalex-snapshot
STABILIZING SELECTION AND THE COMPARATIVE ANALYSIS OF ADAPTATION
inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00549.xopenalex-snapshot
IS A NEW AND GENERAL THEORY OF MOLECULAR SYSTEMATICS EMERGING?
inferredcites →https://doi.org/10.1111/j.1558-5646.2010.01025.xopenalex-snapshot
EARLY BURSTS OF BODY SIZE AND SHAPE EVOLUTION ARE RARE IN COMPARATIVE DATA
inferredcites →https://doi.org/10.1111/j.1558-5646.2011.01289.xopenalex-snapshot
CONVERGENCE, ADAPTATION, AND CONSTRAINT
inferredcites →https://doi.org/10.1111/j.1558-5646.2012.01619.xopenalex-snapshot
MODELING STABILIZING SELECTION: EXPANDING THE ORNSTEIN-UHLENBECK MODEL OF ADAPTIVE EVOLUTION
inferredcites →https://doi.org/10.1111/j.1558-5646.2012.01790.xopenalex-snapshot
DISENTANGLING EVOLUTIONARY CAUSE-EFFECT RELATIONSHIPS WITH PHYLOGENETIC CONFIRMATORY PATH ANALYSIS
inferredcites →https://doi.org/10.1111/nph.15114openalex-snapshot
Functional biogeography of angiosperms: life at the extremes
inferredcites →https://doi.org/10.1111/zsc.12211openalex-snapshot
Comparative genomics and the diversity of life
inferredcites →https://doi.org/10.1126/science.aat7244openalex-snapshot
Convergent regulatory evolution and loss of flight in paleognathous birds
inferredcites →https://doi.org/10.1146/annurev-ecolsys-110218-024555openalex-snapshot
Phylogenetic Comparative Methods and the Evolution of Multivariate Phenotypes
inferredcites →https://doi.org/10.1146/annurev.en.10.010165.000525openalex-snapshot
Phylogenetic Systematics
inferredcites →https://doi.org/10.1146/annurev.ge.27.120193.001225openalex-snapshot
MAPPING POLYGENES
inferredcites →https://doi.org/10.1186/s12864-015-2298-2openalex-snapshot
Mapping the genomic architecture of adaptive traits with interspecific introgressive origin: a coalescent-based approach
inferredcites →https://doi.org/10.1371/journal.pbio.1002224openalex-snapshot
The Dynamics of Incomplete Lineage Sorting across the Ancient Adaptive Radiation of Neoavian Birds
inferredcites →https://doi.org/10.1371/journal.pbio.1002379openalex-snapshot
Phylogenomics Reveals Three Sources of Adaptive Variation during a Rapid Radiation
inferredcites →https://doi.org/10.1371/journal.pcbi.1005958openalex-snapshot
A phylogenetic method to perform genome-wide association studies in microbes that accounts for population structure and recombination
inferredcites →https://doi.org/10.1371/journal.pone.0113523openalex-snapshot
A Machine Reading System for Assembling Synthetic Paleontological Databases
inferredcites →https://doi.org/10.6084/m9.figshare.6693701openalex-snapshot
Coal-Miner: A Statistical Method For GWA Studies of Quantitative Traits With Complex Evolutionary Origins
inferredcites →https://doi.org/10.7287/peerj.preprints.26988v1openalex-snapshot
Phenoscape: Semantic analysis of organismal traits and genes yields insights in evolutionary biology
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Pigmentation Genes Show Evidence of Repeated Divergence and Multiple Bouts of Introgression in Setophaga Warblers
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Evolutionary genetics meets ecological immunology: insights into the evolution of immune systems
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Reproductive Meristem (REM) family genes GhREM1 and GhREM5.4 act as potential regulators of temperature stress response in cotton
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Phylogenomic insights into Adenophora and its allies (Campanulaceae): Revisiting generic delimitation and hybridization dynamics
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A robust phylogenomic framework supports a revised intrafamilial classification of Urticaceae
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Microbial degradation of Dicamba: Emerging enzymes, genetic pathways, and prospects for engineered bioremediation
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Earth Biogenome Project: present status and future plans
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The untapped potential of short-read sequencing in biodiversity research
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Phylogenomics beyond the ‘bag-of-genes’ model
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Life in Deserts: The Genetic Basis of Mammalian Desert Adaptation
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Genome annotation: From human genetics to biodiversity genomics
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The genomes of nematode-trapping fungi provide insights into the origin and diversification of fungal carnivorism
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The macroevolutionary dynamics of pharyngognathy in fishes fail to support the key innovation hypothesis
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Ecological diversification of sea catfishes is accompanied by genome-wide signatures of positive selection
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Phylogenetically informed predictions outperform predictive equations in real and simulated data
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Ecological and genomic signatures of the convergent evolution of planktivory in fossil and living reef fishes over deep time
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Detecting macroevolutionary genotype–phenotype associations using error-corrected rates of protein convergence
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Evolution of the human pathogenic lifestyle in fungi
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The genetic foundations of convergent traits
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Drivers of avian genomic change revealed by evolutionary rate decomposition
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The Biodiversity Cell Atlas: mapping the tree of life at cellular resolution
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African mitochondrial haplogroup L7: a 100,000-year-old maternal human lineage discovered through reassessment and new sequencing
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PRDM9 losses in vertebrates are coupled to those of paralogs ZCWPW1 and ZCWPW2
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Machine learning enables identification of an alternative yeast galactose utilization pathway
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Convergent expansions of keystone gene families drive metabolic innovation in Saccharomycotina yeasts
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Accurate, scalable, and fully automated inference of species trees from raw genome assemblies using ROADIES
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Adaptive molecular convergence is pervasive across deep time and largely decoupled from phenotypic convergence
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The Stress-Tolerant Tortoise and the Competitive Hare: “Fast-Slow” Plant Ecological Strategies and the Legacy of Reich et al. (2003)
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Re-evaluating Deep Neural Networks for Phylogeny Estimation: The Issue of Taxon Sampling
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Phylogenomics and trait evolution illuminate the diversification and systematics of Discocactus (Cactaceae)
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Computational strategies in tumor phylogenetics: evaluating multimodal integration and methodological trade-offs across study designs
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Explaining a lack of evolutionary change: why is the ‘plesiosaur-like’ morphotype restricted to a single lineage of sea snakes?
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Mitogenomics clarifies the position of the Nearctic magpies (Pica hudsonia and Pica nuttalli) within the Holarctic magpie radiation
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Characterizing and mitigating confounding by unreplicated evolutionary events in phylogenetic regression
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Rapid divergence with gene flow creates intractable nodes in the tree of life: an empirical demonstration in the buzzing flowerpecker ( Dicaeum hypoleucum )
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Unsupervised Deep Learning Can Identify Protein Functional Groups from Unaligned Sequences
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Evaluating the Performance of Widely Used Phylogenetic Models for Gene Expression Evolution
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Pervasive Mitochondrial tRNA Gene Loss in Clade B of Haplosclerid Sponges (Porifera, Demospongiae)
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From Trees to Traits: A Review of Advances in PhyloG2P Methods and Future Directions
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Ancestral Chromosome-Level Assemblies Reveal Posthybridization Genome Evolution in the New Mexico Whiptail Lizard ( Aspidoscelis neomexicanus )
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Signatures of Innovation and Selection in the Extremotolerant Yeast Kluyveromyces marxianus
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Practical Guidance and Workflows for Identifying Fast Evolving Non-Coding Genomic Elements Using PhyloAcc
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Integrating Intermediate Traits in Phylogenetic Genotype-to-Phenotype Studies
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From Candidate Genes to Macroevolution: An Integrated Approach to Modeling the Evolution of Plant Innovations
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Syngnathoid Evolutionary History and the Conundrum of Fossil Misplacement
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The evolutionary potential of symbiosis
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Gene Conversion Facilitates the Adaptive Evolution of Self-Resistance in Highly Toxic Newts
inferred← citeshttps://doi.org/10.1093/molbev/msac082openalex-snapshot
Venom Gene Sequence Diversity and Expression Jointly Shape Diet Adaptation in Pitvipers
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Whole-genome Comparisons Identify Repeated Regulatory Changes Underlying Convergent Appendage Evolution in Diverse Fish Lineages
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PhyloAcc-GT: A Bayesian Method for Inferring Patterns of Substitution Rate Shifts on Targeted Lineages Accounting for Gene Tree Discordance
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Genomic Signatures Associated with Transitions to Viviparity in Cyprinodontiformes
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Widespread turnover of a conserved cis - regulatory code across 589 grass species
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The genomic revolution and species delimitation in birds (and other organisms): Why phenotypes should not be overlooked
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A Codon Model for Associating Phenotypic Traits with Altered Selective Patterns of Sequence Evolution
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Practical Guide and Review of Fossil Tip-Dating in Phylogenetics
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Evolutionary phenome-genome analysis of cranial suture closure in mammals
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PRDM9 losses in vertebrates are coupled to those of paralogs ZCWPW1 and ZCWPW2
inferred← citeshttps://doi.org/10.1101/2022.11.09.515828openalex-snapshot
Accurate Detection of Incomplete Lineage Sorting via Supervised Machine Learning
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PhyloAcc-GT: A Bayesian method for inferring patterns of substitution rate shifts and associations with binary traits under gene tree discordance
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Linking phenotypic and genotypic variation: a relaxed phylogenetic approach using the probabilistic programming language Stan
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Islands promote diversification within the silvereye clade: a phylogenomic analysis of a great speciator
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Estimates of molecular convergence reveal genes with intermediate pleiotropy underlying adaptive variation across teleost fish
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Convergent expansions of keystone gene families drive metabolic innovation in a major eukaryotic clade
inferred← citeshttps://doi.org/10.1101/2024.11.15.623873openalex-snapshot
GWAC: A machine learning method to identify functional variants in data-constrained species
inferred← citeshttps://doi.org/10.1101/2024.12.02.626204openalex-snapshot
A Phylogeny-Based Approach to Discover Mutational Processes in Primates
inferred← citeshttps://doi.org/10.1101/2025.02.08.637240openalex-snapshot
Convergent molecular changes are associated with the evolution of low susceptibility to the ash dieback pathogen
inferred← citeshttps://doi.org/10.1101/2025.02.19.638997openalex-snapshot
Drivers of avian genomic change revealed by evolutionary rate decomposition
inferred← citeshttps://doi.org/10.1101/2025.09.08.674744openalex-snapshot
A phylogenetic protein-coding genome-phenome map of complex traits across 224 primate species
inferred← citeshttps://doi.org/10.1101/cshperspect.a041439openalex-snapshot
Genetics and the Evolution of Prezygotic Isolation
inferred← citeshttps://doi.org/10.1101/gr.278546.123openalex-snapshot
Toward telomere-to-telomere cat genomes for precision medicine and conservation biology
inferred← citeshttps://doi.org/10.1111/2041-210x.13790openalex-snapshot
Rapid alignment updating with Extensiphy
inferred← citeshttps://doi.org/10.1111/brv.12676openalex-snapshot
A paradigm shift in our view of species drives current trends in biological classification
inferred← citeshttps://doi.org/10.1111/brv.70001openalex-snapshot
Multi‐response phylogenetic mixed models: concepts and application
inferred← citeshttps://doi.org/10.1111/eva.13565openalex-snapshot
Identifying and addressing methodological incongruence in phylogenomics: A review
inferred← citeshttps://doi.org/10.1111/evo.14213openalex-snapshot
How should functional relationships be evaluated using phylogenetic comparative methods? A case study using metabolic rate and body temperature
inferred← citeshttps://doi.org/10.1111/jbi.14285openalex-snapshot
Identifying traits that enable lizard adaptation to different habitats
inferred← citeshttps://doi.org/10.1111/mec.17830openalex-snapshot
Islands Promote Diversification of the Silvereye Species Complex: A Phylogenomic Analysis of a Great Speciator
inferred← citeshttps://doi.org/10.1111/nph.16793openalex-snapshot
Pollination syndromes in the 21 st century: where do we stand and where may we go?
inferred← citeshttps://doi.org/10.1111/nph.19143openalex-snapshot
SeedArc, a global archive of primary seed germination data
inferred← citeshttps://doi.org/10.1111/pce.14662openalex-snapshot
A genomic panel for studying C3‐C4 intermediate photosynthesis in the Brassiceae tribe
inferred← citeshttps://doi.org/10.1146/annurev-arplant-053122-030653openalex-snapshot
The Power and Perils of De Novo Domestication Using Genome Editing
inferred← citeshttps://doi.org/10.1146/annurev-ecolsys-012121-085928openalex-snapshot
What Have We Learned from the First 500 Avian Genomes?
inferred← citeshttps://doi.org/10.1146/annurev-ecolsys-102221-050754openalex-snapshot
A Guided Tour of Phylogenetic Comparative Methods for Studying Trait Evolution
inferred← citeshttps://doi.org/10.1146/annurev-ecolsys-102723-050400openalex-snapshot
Origin and Early Evolution of Squamates and Their Kin: From Fossils to Genomes
inferred← citeshttps://doi.org/10.1186/s12859-023-05270-8openalex-snapshot
nRCFV: a new, dataset-size-independent metric to quantify compositional heterogeneity in nucleotide and amino acid datasets
inferred← citeshttps://doi.org/10.1186/s12870-020-02533-xopenalex-snapshot
Degradation of key photosynthetic genes in the critically endangered semi-aquatic flowering plant Saniculiphyllum guangxiense (Saxifragaceae)
inferred← citeshttps://doi.org/10.1186/s12915-025-02156-4openalex-snapshot
Convergent evolution of noncoding elements associated with short tarsus length in birds
inferred← citeshttps://doi.org/10.1201/9781003138846-3openalex-snapshot
Phylogeography of Southern Hemisphere Blue Mussels of the Genus Mytilus: Evolution, Biosecurity, Aquaculture and Food Labelling
inferred← citeshttps://doi.org/10.1242/jeb.243411openalex-snapshot
Epigenomics as a paradigm to understand the nuances of phenotypes
inferred← citeshttps://doi.org/10.1371/journal.pbio.3002633openalex-snapshot
Integrating phylogenies into single-cell RNA sequencing analysis allows comparisons across species, genes, and cells
inferred← citeshttps://doi.org/10.1371/journal.pbio.3002847openalex-snapshot
Unifying approaches from statistical genetics and phylogenetics for mapping phenotypes in structured populations
inferred← citeshttps://doi.org/10.1371/journal.pbio.3003539openalex-snapshot
Biased sampling driven by bacterial population structure confounds machine learning prediction of antimicrobial resistance
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1011995openalex-snapshot
A phylogenetic method linking nucleotide substitution rates to rates of continuous trait evolution
inferred← citeshttps://doi.org/10.1371/journal.pgen.1010607openalex-snapshot
The evolution of ovary-biased gene expression in Hawaiian Drosophila
inferred← citeshttps://doi.org/10.1371/journal.pone.0349868openalex-snapshot
Climatic and geological drivers of diversity in Iranian Barbels lineage (Cypriniformes: Cyprinidae: Barbinae and Torinae): An integrative taxonomic perspective
inferred← citeshttps://doi.org/10.14393/ufu.te.2023.7007openalex-snapshot
Análise da estrutura taxonômica, funcional e filogenética de comunidade de formigas em áreas savânicas e florestais do Cerrado.
inferred← citeshttps://doi.org/10.1590/1983-21172022240133openalex-snapshot
A RECONTEXTUALIZAÇÃO DO DISCURSO SOBRE BIODIVERSIDADE EM UM CURSO DE FORMAÇÃO PARA PROFESSORES DE CIÊNCIAS
inferred← citeshttps://doi.org/10.21203/rs.3.rs-11188068/v1openalex-snapshot
Extremely Divergent Repeats Made the Largest Bilaterian Mitogenome in Photosymbiotic Bivalves
inferred← citeshttps://doi.org/10.2139/ssrn.6239469openalex-snapshot
Outgroup Dilution: separating the effects of incomplete lineage sorting (ILS), introgression (INT), and homoplasy arising from long-branch attraction (OGA)
inferred← citeshttps://doi.org/10.25267/rev_eureka_ensen_divulg_cienc.2023.v20.i1.1603openalex-snapshot
La recontextualización de discursos sobre biodiversidad y ciudadanía en un curso de formación para profesores de ciencias
inferred← citeshttps://doi.org/10.3389/fmars.2025.1562045openalex-snapshot
Genomic infrastructure for cetacean research and conservation: reference genomes for eight families spanning the cetacean tree of life
inferred← citeshttps://doi.org/10.3390/agriculture15111157openalex-snapshot
Addressing Biological Invasions in Agriculture with Big Data in an Informatics Age
inferred← citeshttps://doi.org/10.3390/ani13030471openalex-snapshot
Genome Evolution and the Future of Phylogenomics of Non-Avian Reptiles
inferred← citeshttps://doi.org/10.3390/bioengineering11050480openalex-snapshot
Common Methods for Phylogenetic Tree Construction and Their Implementation in R
inferred← citeshttps://doi.org/10.3390/genes14071387openalex-snapshot
The State of Squamate Genomics: Past, Present, and Future of Genome Research in the Most Speciose Terrestrial Vertebrate Order
inferred← citeshttps://doi.org/10.64898/2026.02.01.702050openalex-snapshot
An Integrative Phylogenomic Framework Quantifies the Dominant Role of Introgression in Phylogenetic Discordance among Diploid Oryza Species
inferred← citeshttps://doi.org/10.64898/2026.06.28.735080openalex-snapshot
Genomic Distortion of Jawed Vertebrate Phylogeny
inferred← citeshttps://doi.org/10.64898/2026.08.25.747131openalex-snapshot
The largest radiations of freshwater fishes initiated at the Cretaceous-Paleogene boundary
inferred← citeshttps://doi.org/10.70675/af3af45az8c5fz4042zbf44z74b33801d49fopenalex-snapshot
Identification of Novel Viral Interacting Proteins through the Detection of Genetic INNovations (DGINN) combined with functional assays
inferred← citeshttps://doi.org/10.7554/elife.107021openalex-snapshot
Cryptovaranoides is not a squamate
inferred← citeshttps://doi.org/10.7554/elife.107021.1openalex-snapshot
Cryptovaranoides is not a squamate
inferred← citeshttps://doi.org/10.7554/elife.107021.2openalex-snapshot
Cryptovaranoides is not a squamate
inferred← citeshttps://doi.org/10.7554/elife.107021.3openalex-snapshot
Cryptovaranoides is not a squamate
inferred← citeshttps://doi.org/10.7554/elife.72460openalex-snapshot
Phylogenomic analyses of echinoid diversification prompt a re-evaluation of their fossil record
inferred← citeshttps://doi.org/10.7554/elife.83593openalex-snapshot
Regulatory and coding sequences of TRNP1 co-evolve with brain size and cortical folding in mammals
inferred← citeshttps://doi.org/10.7554/elife.91997openalex-snapshot
Inter-species association mapping links splice site evolution to METTL16 and SNRNP27K
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