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Attributes and congruence of three molecular data sets: Inferring phylogenies among Septoria-related species from woody perennial plants
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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T-coffee: a novel method for fast and accurate multiple sequence alignment 1 1Edited by J. Thornton
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Assessing the Relative Contribution of Molecular and Morphological Characters in Simultaneous Analysis Trees
inferredcites →https://doi.org/10.1006/mpev.1998.0531openalex-snapshot
Base Compositional Bias and Phylogenetic Analyses: A Test of the “Flying DNA” Hypothesis
inferredcites →https://doi.org/10.1006/mpev.2000.0782openalex-snapshot
Variation in Modes and Rates of Evolution in Nuclear and Mitochondrial Ribosomal DNA in the Mushroom Genus Amanita (Agaricales, Basidiomycota): Phylogenetic Implications
inferredcites →https://doi.org/10.1006/mpev.2000.0845openalex-snapshot
Noise and Incongruence: Interpreting Results of the Incongruence Length Difference Test
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A Maximum-Likelihood Analysis of Eight Phylogenetic Markers in Gallwasps (Hymenoptera: Cynipidae): Implications for Insect Phylogenetic Studies
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Molecular Systematics: 1994–1995
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Estimating the pattern of nucleotide substitution
inferredcites →https://doi.org/10.1007/bf01731581openalex-snapshot
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
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DNA sequence, structure, and phylogenetic relationship of the small subunit rRNA coding region of mitochondrial DNA fromPodospora anserina
inferredcites →https://doi.org/10.1007/s11557-006-0101-0openalex-snapshot
A phylogenetic study of some Septoria species pathogenic to Asteraceae based on ITS ribosomal DNA sequences
inferredcites →https://doi.org/10.1016/0003-2697(80)90165-7openalex-snapshot
A simple, rapid, and sensitive DNA assay procedure
inferredcites →https://doi.org/10.1016/0168-9525(90)90186-aopenalex-snapshot
PCR protocols — A guide to methods and applications
inferredcites →https://doi.org/10.1016/0169-5347(96)10006-9openalex-snapshot
Combining data in phylogenetic analysis
inferredcites →https://doi.org/10.1016/0968-0004(90)90252-7openalex-snapshot
PCR protocols — A guide to methods and applications
inferredcites →https://doi.org/10.1016/b978-0-12-372180-8.50042-1openalex-snapshot
AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS
inferredcites →https://doi.org/10.1016/b978-1-4832-3210-2.50006-6openalex-snapshot
Mammalian Protein Metabolism
inferredcites →https://doi.org/10.1016/b978-1-4832-3211-9.50009-7openalex-snapshot
Evolution of Protein Molecules
inferredcites →https://doi.org/10.1016/j.tree.2004.07.002openalex-snapshot
Bayesian inference of character evolution
inferredcites →https://doi.org/10.1016/j.ympev.2003.11.001openalex-snapshot
Supraordinal phylogenetic relationships of Lecanoromycetes based on a Bayesian analysis of combined nuclear and mitochondrial sequences
inferredcites →https://doi.org/10.1016/j.ympev.2004.04.012openalex-snapshot
Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory
inferredcites →https://doi.org/10.1016/j.ympev.2005.03.010openalex-snapshot
Evolutionary relationships of the cup-fungus genus Peziza and Pezizaceae inferred from multiple nuclear genes: RPB2, β-tubulin, and LSU rDNA
inferredcites →https://doi.org/10.1016/s0007-1536(84)80035-2openalex-snapshot
Taxonomic revision of Septoria-like fungi parasitic on Betulaceae
inferredcites →https://doi.org/10.1016/s0007-1536(87)80011-6openalex-snapshot
New species of Pseudocercospora and Mycovellosiella, and new combinations into Pseudocercospora and Phaeoramularia
inferredcites →https://doi.org/10.1016/s0953-7562(08)61965-6openalex-snapshot
Primers for amplification of mt SSU rDNA, and a phylogenetic study of Botryosphaeria and associated anamorphic fungi
inferredcites →https://doi.org/10.1016/s1055-7903(02)00202-6openalex-snapshot
Amino acid vs. nucleotide characters: challenging preconceived notions
inferredcites →https://doi.org/10.1016/s1055-7903(02)00244-0openalex-snapshot
Phylogenetic relationships of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support
inferredcites →https://doi.org/10.1017/s0953756201003835openalex-snapshot
ITS rDNA phylogeny of selected Mycosphaerella species and their anamorphs occurring on Myrtaceae
inferredcites →https://doi.org/10.1017/s0953756201003926openalex-snapshot
Phylogenetic relationships among Neofabraea species causing tree cankers and bull's-eye rot of apple based on DNA sequencing of ITS nuclear rDNA, mitochondrial rDNA, and the β-tubulin gene
inferredcites →https://doi.org/10.1017/s0953756204001054openalex-snapshot
Mycosphaerella punctiformis revisited: morphology, phylogeny, and epitypification of the type species of the genus Mycosphaerella (Dothideales, Ascomycota)
inferredcites →https://doi.org/10.1017/s0953756205003242openalex-snapshot
Specific and sensitive PCR-based detection of Septoria musiva, S. populicola and S. populi the causes of leaf spot and stem canker on poplars
inferredcites →https://doi.org/10.1017/s0953756299008680openalex-snapshot
Phylogenetic relationships among some cercosporoid anamorphs of Mycosphaerella based on rDNA sequence analysis
inferredcites →https://doi.org/10.1038/nrg1044openalex-snapshot
Phylogeny estimation: traditional and Bayesian approaches
inferredcites →https://doi.org/10.1071/ap04076openalex-snapshot
Neodolichodorus australisn.sp. (Nematoda: Dolichodoridae) on carrot in Australia
inferredcites →https://doi.org/10.1071/ap05082openalex-snapshot
Hosts, species and genotypes: opinions versus data
inferredcites →https://doi.org/10.1073/pnas.212646199openalex-snapshot
Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics
inferredcites →https://doi.org/10.1073/pnas.95.21.12390openalex-snapshot
The optimization principle in phylogenetic analysis tends to give incorrect topologies when the number of nucleotides or amino acids used is small
inferredcites →https://doi.org/10.1080/00275514.1991.12026060openalex-snapshot
Septoria Species on Cornus
inferredcites →https://doi.org/10.1080/00275514.1998.12026898openalex-snapshot
Ultrastructure of Conidiogenesis and Conidia in Two Species of Septoria Sensu Lato
inferredcites →https://doi.org/10.1080/00275514.2001.12063227openalex-snapshot
Phylogenetic analyses of the ITS region of ribosomal DNA reveal that Septoria passerinii from barley is closely related to the wheat pathogen Mycosphaerella graminicola
inferredcites →https://doi.org/10.1080/10635150116801openalex-snapshot
Failure of the ILD to Determine Data Combinability for Slow Loris Phylogeny
inferredcites →https://doi.org/10.1080/10635150118679openalex-snapshot
Phylogenetic Utility of Different Types of Molecular Data Used to Infer Evolutionary Relationships among Stalk-Eyed Flies (Diopsidae)
inferredcites →https://doi.org/10.1080/106351502753475844openalex-snapshot
Combined Data, Bayesian Phylogenetics, and the Origin of the New Zealand Cicada Genera
inferredcites →https://doi.org/10.1080/10635150290102366openalex-snapshot
Potential Applications and Pitfalls of Bayesian Inference of Phylogeny
inferredcites →https://doi.org/10.1080/10635150390235368openalex-snapshot
Type I Sts Markers Are More Informative than Cytochrome b in Phylogenetic Reconstruction of the Mustelidae (Mammalia: Carnivora)
inferredcites →https://doi.org/10.1080/10635150390235485openalex-snapshot
Reliability of Bayesian Posterior Probabilities and Bootstrap Frequencies in Phylogenetics
inferredcites →https://doi.org/10.1080/10635150490264699openalex-snapshot
Bayesian Phylogenetic Analysis of Combined Data
inferredcites →https://doi.org/10.1080/10635150490264752openalex-snapshot
Congruence Versus Phylogenetic Accuracy: Revisiting the Incongruence Length Difference Test
inferredcites →https://doi.org/10.1080/106351598260581openalex-snapshot
Combining Data Sets with Different Phylogenetic Histories
inferredcites →https://doi.org/10.1093/bioinformatics/14.9.817openalex-snapshot
MODELTEST: testing the model of DNA substitution.
inferredcites →https://doi.org/10.1093/bioinformatics/17.12.1244openalex-snapshot
MEGA2: molecular evolutionary genetics analysis software
inferredcites →https://doi.org/10.1093/bioinformatics/btg180openalex-snapshot
MrBayes 3: Bayesian phylogenetic inference under mixed models
inferredcites →https://doi.org/10.1093/genetics/135.2.599openalex-snapshot
Simple methods for testing the molecular evolutionary clock hypothesis.
inferredcites →https://doi.org/10.1093/molbev/msg067openalex-snapshot
Heterogeneity of Nucleotide Frequencies Among Evolutionary Lineages and Phylogenetic Inference
inferredcites →https://doi.org/10.1093/molbev/msg136openalex-snapshot
Assessing the Phylogenetic Utility of Four Mitochondrial Genes and a Nuclear Intron in the Asian Pit Viper Genus, Trimeresurus: Separate, Simultaneous, and Conditional Data Combination Analyses
inferredcites →https://doi.org/10.1093/molbev/msh014openalex-snapshot
How Meaningful Are Bayesian Support Values?
inferredcites →https://doi.org/10.1093/molbev/msh052openalex-snapshot
Are Combined Analyses Better Than Single Gene Phylogenies? A Case Study Using SSU rDNA and rbcL Sequence Comparisons in the Zygnematophyceae (Streptophyta)
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003848openalex-snapshot
Uninformative Characters and Apparent Conflict Between Molecules and Morphology
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003932openalex-snapshot
Shared Nucleotide Composition Biases Among Species and Their Impact on Phylogenetic Reconstructions of the Drosophilidae
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004053openalex-snapshot
Combining Multiple Data Sets in a Likelihood Analysis: Which Models are the Best?
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025813openalex-snapshot
Can three incongruence tests predict when data should be combined?
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026290openalex-snapshot
Multigene Phylogeny of Land Plants with Special Reference to Bryophytes and the Earliest Land Plants
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026405openalex-snapshot
Bias in Phylogenetic Reconstruction of Vertebrate Rhodopsin Sequences
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040023openalex-snapshot
Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040760openalex-snapshot
Rate and mode differences between nuclear and mitochondrial small-subunit rRNA genes in mushrooms.
inferredcites →https://doi.org/10.1093/sysbio/38.1.7openalex-snapshot
A Concern for Evidence and a Phylogenetic Hypothesis of Relationships among Epicrates (Boidae, Serpentes)
inferredcites →https://doi.org/10.1093/sysbio/42.3.384openalex-snapshot
Partitioning and Combining Data in Phylogenetic Analysis
inferredcites →https://doi.org/10.1093/sysbio/43.4.482openalex-snapshot
Compositional Bias, Character-State Bias, and Character-State Reconstruction Using Parsimony
inferredcites →https://doi.org/10.1093/sysbio/44.4.570openalex-snapshot
Constructing a Significance Test for Incongruence
inferredcites →https://doi.org/10.1093/sysbio/46.4.654openalex-snapshot
Multiple Sources of Character Information and the Phylogeny of Hawaiian Drosophilids
inferredcites →https://doi.org/10.1094/pd-67-1149openalex-snapshot
Needle Cast of European Larch Caused byMycosphaerella laricinain Wisconsin and Iowa
inferredcites →https://doi.org/10.1094/phyto.2001.91.7.648openalex-snapshot
Phylogenetic Analysis of Cercospora and Mycosphaerella Based on the Internal Transcribed Spacer Region of Ribosomal DNA
inferredcites →https://doi.org/10.1111/j.1096-0031.1994.tb00179.xopenalex-snapshot
BRANCH SUPPORT AND TREE STABILITY
inferredcites →https://doi.org/10.1111/j.1096-0031.1994.tb00181.xopenalex-snapshot
TESTING SIGNIFICANCE OF INCONGRUENCE
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PHYLOGENETIC INFERENCE FROM RESTRICTION ENDONUCLEASE CLEAVAGE SITE MAPS WITH PARTICULAR REFERENCE TO THE EVOLUTION OF HUMANS AND THE APES
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INFERRING PHYLOGENIES FROM mt DNA VARIATION: MITOCHONDRIAL-GENE TREES VERSUS NUCLEAR-GENE TREES
inferredcites →https://doi.org/10.1128/aem.60.12.4324-4331.1994openalex-snapshot
PCR primers that allow intergeneric differentiation of ascomycetes and their application to Verticillium spp
inferredcites →https://doi.org/10.1128/mcb.6.1.195openalex-snapshot
Inheritance of DNA methylation in Coprinus cinereus.
inferredcites →https://doi.org/10.1139/cjr39c-019openalex-snapshot
SEPTORIA CANKER OF INTRODUCED AND NATIVE HYBRID POPLARS
inferredcites →https://doi.org/10.14601/phytopathol_mediterr-14998u1.29openalex-snapshot
BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT
inferredcites →https://doi.org/10.2307/2419070openalex-snapshot
Gene Trees and Species Trees: Molecular Systematics as One-Character Taxonomy
inferredcites →https://doi.org/10.2307/2419457openalex-snapshot
Congruence and Consensus in the Cotton Tribe (Malvaceae)
inferredcites →https://doi.org/10.2307/2992432openalex-snapshot
A Concern for Evidence and a Phylogenetic Hypothesis of Relationships Among Epicrates (Boidae, Serpentes)
inferredcites →https://doi.org/10.2307/3759917openalex-snapshot
Fungi on Plants and Plant Products in the United States
inferredcites →https://doi.org/10.2307/3761670openalex-snapshot
A Phylogenetic Redefinition of Anamorph Genera in Mycosphaerella Based on ITS rDNA Sequence and Morphology
inferredcites →https://doi.org/10.2307/3761758openalex-snapshot
Phylogenetic Analyses of the ITS Region of Ribosomal DNA Reveal That Septoria passerinii from Barley Is Closely Related to the Wheat Pathogen Mycosphaerella graminicola
inferredcites →https://doi.org/10.2307/3762175openalex-snapshot
Phylogenetic Analyses of Septoria Species Based on the ITS and LSU-D2 Regions of Nuclear Ribosomal DNA
inferredcites →https://doi.org/10.48044/jauf.1989.056openalex-snapshot
Septoria Leaf Spot on Dogwoods
inferredcites →https://doi.org/10.5962/bhl.title.5371openalex-snapshot
Sylloge fungorum omnium hucusque cognitorum
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.11646/phytotaxa.571.2.3zenodo-depositor-declared
Neokamalomyces indicus gen. nov., sp. nov. (Mycosphaerellaceae)—a Septoria-like genus from India
inferred← citeshttps://doi.org/10.1007/s00239-005-0309-7openalex-snapshot
Variability of Nuclear SSU-rDNA Group Introns Within Septoria Species: Incongruence with Host Sequence Phylogenies
inferred← citeshttps://doi.org/10.1007/s10530-015-1051-8openalex-snapshot
Anthropogenic signature in the incidence and distribution of an emerging pathogen of poplars
inferred← citeshttps://doi.org/10.1007/s10658-020-02170-yopenalex-snapshot
Epitypification of Cercospora coffeicola and its involvement with two different symptoms on coffee leaves in Brazil
inferred← citeshttps://doi.org/10.1007/s11557-026-02157-9openalex-snapshot
Hyalokamalomyces: a novel Septoria-like genus in Mycosphaerellaceae based on polyphasic evidences
inferred← citeshttps://doi.org/10.1007/s11676-016-0363-6openalex-snapshot
Molecular approach to determine taxonomic status of Septoria sp. causing leaf blotch of Castanea sativa in Hyrcanian forests
inferred← citeshttps://doi.org/10.1007/s13225-020-00440-yopenalex-snapshot
Taxonomy and phylogeny of hyaline-spored coelomycetes
inferred← citeshttps://doi.org/10.1016/j.funbio.2012.04.012openalex-snapshot
Foliar pathogens of Populus angustifolia are consistent with a hypothesis of Beringian migration into North America
inferred← citeshttps://doi.org/10.1016/j.funbio.2017.09.006openalex-snapshot
When the ribosomal DNA does not tell the truth: The case of the taxonomic position of Kurtia argillacea, an ericoid mycorrhizal fungus residing among Hymenochaetales
inferred← citeshttps://doi.org/10.1016/j.mycres.2008.11.015openalex-snapshot
Diversity and evolutionary origins of fungi associated with seeds of a neotropical pioneer tree: a case study for analysing fungal environmental samples
inferred← citeshttps://doi.org/10.1016/j.mycres.2009.02.007openalex-snapshot
Fungal pathogen (mis-) identifications: A case study with DNA barcodes on Melampsora rusts of aspen and white poplar
inferred← citeshttps://doi.org/10.1016/j.ympev.2007.04.016openalex-snapshot
Molecular phylogeny of the Siphonocladales (Chlorophyta: Cladophorophyceae)
inferred← citeshttps://doi.org/10.1073/pnas.1424293112openalex-snapshot
Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen
inferred← citeshttps://doi.org/10.1080/07060661003740009openalex-snapshot
Recent advances related to poplar leaf spot and canker caused by Septoria musiva
inferred← citeshttps://doi.org/10.1094/pdis-01-17-0116-reopenalex-snapshot
Further Support of Conspecificity of Oak and Mango Powdery Mildew and First Report of Erysiphe quercicola and Erysiphe alphitoides on Mango in Mainland Europe
inferred← citeshttps://doi.org/10.1094/phyto-12-17-0399-ropenalex-snapshot
Cryptic Speciation in Western North America and Eastern Eurasia of the Pathogens Responsible for Laminated Root Rot
inferred← citeshttps://doi.org/10.1111/j.1529-8817.2012.01145.xopenalex-snapshot
MOLECULAR PHYLOGENY AND TAXONOMY OF THE AEGAGROPILA CLADE (CLADOPHORALES, ULVOPHYCEAE), INCLUDING THE DESCRIPTION OF AEGAGROPILOPSIS GEN. NOV. AND PSEUDOCLADOPHORA GEN. NOV.1
inferred← citeshttps://doi.org/10.1111/ppa.13363openalex-snapshot
Characterization and pathogenicity of Septoria gaurina associated with leaf blotch disease on Gaura parviflora in China
inferred← citeshttps://doi.org/10.1371/journal.pone.0138162openalex-snapshot
Transcriptome Analysis of Poplar during Leaf Spot Infection with Sphaerulina spp.
inferred← citeshttps://doi.org/10.18174/121995openalex-snapshot
Phylogeny, detection, and mating behaviour of Mycosphaerella spp. occurring on banana
inferred← citeshttps://doi.org/10.18307/2018.0402openalex-snapshot
A review on the ecology of Cladophora
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1677203/v1openalex-snapshot
Morphology and phylogeny of Neokamalomyces indicus—an addition of Septoria-like new genus and species to Mycosphaerellaceae from India
inferred← citeshttps://doi.org/10.2139/ssrn.4854573openalex-snapshot
Transcriptomic Time Series Analysis in Poplars in Response to Sphaerulina Stress
inferred← citeshttps://doi.org/10.3114/sim0018openalex-snapshot
A new approach to species delimitation in Septoria
inferred← citeshttps://doi.org/10.3767/003158512x661282openalex-snapshot
DNA barcoding of Mycosphaerella species of quarantine importance to Europe
inferred← citeshttps://doi.org/10.7287/peerj.4392v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Genome-Enhanced Detection and Identification (GEDI) of plant pathogens (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.4392v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Genome-Enhanced Detection and Identification (GEDI) of plant pathogens (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.4392v0.1/reviews/3openalex-snapshot
Peer Review #3 of "Genome-Enhanced Detection and Identification (GEDI) of plant pathogens (v0.1)"
inferred← citeshttps://doi.org/10.7717/peerj.4392openalex-snapshot
Genome-Enhanced Detection and Identification (GEDI) of plant pathogens
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