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Identification of Novel Malarial Cysteine Protease Inhibitors Using Structure-Based Virtual Screening of a Focused Cysteine Protease Inhibitor Library

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Nonpeptidic Vinyl and Allyl Phosphonates as Falcipain‐2 Inhibitors
inferredcites →https://doi.org/10.1002/cmdc.201000265openalex-snapshot
α‐Ketoheterocycles as Inhibitors of Leishmania mexicana Cysteine Protease CPB
inferredcites →https://doi.org/10.1002/med.20163openalex-snapshot
Falcipain‐2 inhibitors
inferredcites →https://doi.org/10.1007/bf00554788openalex-snapshot
Estimating the hessian for gradient-type geometry optimizations
inferredcites →https://doi.org/10.1016/j.bbrc.2004.08.130openalex-snapshot
Homology modeling and mutagenesis analyses of Plasmodium falciparum falcipain 2A: implications for rational drug design
inferredcites →https://doi.org/10.1016/j.bmcl.2006.11.044openalex-snapshot
A generally applicable method for assessing the electrophilicity and reactivity of diverse nitrile-containing compounds
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The discovery of odanacatib (MK-0822), a selective inhibitor of cathepsin K
inferredcites →https://doi.org/10.1016/j.bmcl.2008.05.068openalex-snapshot
Design and synthesis of novel 2-pyridone peptidomimetic falcipain 2/3 inhibitors
inferredcites →https://doi.org/10.1016/j.cbpa.2004.06.002openalex-snapshot
Target-biased scoring approaches and expert systems in structure-based virtual screening
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Integrating virtual screening in lead discovery
inferredcites →https://doi.org/10.1016/j.molbiopara.2006.06.013openalex-snapshot
Gene disruptions demonstrate independent roles for the four falcipain cysteine proteases of Plasmodium falciparum
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A direct evaluation of regional Fukui functions in molecules
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Human cathepsin X: A novel cysteine protease of the papain family with a very short proregion and unique insertions1
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3,4-Disubstituted azetidinones as selective inhibitors of the cysteine protease cathepsin K. Exploring P2 elements for selectivity
inferredcites →https://doi.org/10.1016/s0968-0896(99)00007-3openalex-snapshot
Cyclopropenone-containing cysteine proteinase inhibitors. Synthesis and enzyme inhibitory activities
inferredcites →https://doi.org/10.1016/s0968-0896(99)00011-5openalex-snapshot
Potent dipeptidylketone inhibitors of the cysteine protease cathepsin K
inferredcites →https://doi.org/10.1016/s0969-2126(00)00173-8openalex-snapshot
A target within the target: probing cruzain’s P1′ site to define structural determinants for the Chagas’ disease protease
inferredcites →https://doi.org/10.1021/ci1000373openalex-snapshot
Targeting the BH3 Domain Mediated Protein−Protein Interaction of Bcl-xL through Virtual Screening
inferredcites →https://doi.org/10.1021/ci800386vopenalex-snapshot
Hybrid Structure-Based Virtual Screening Protocol for the Identification of Novel BACE1 Inhibitors
inferredcites →https://doi.org/10.1021/jm00017a002openalex-snapshot
Vinyl Sulfones as Mechanism-Based Cysteine Protease Inhibitors
inferredcites →https://doi.org/10.1021/jm00026a010openalex-snapshot
In Vitro Antimalarial Activity of Chalcones and Their Derivatives
inferredcites →https://doi.org/10.1021/jm000320topenalex-snapshot
Cyclic Ketone Inhibitors of the Cysteine Protease Cathepsin K
inferredcites →https://doi.org/10.1021/jm00074a031openalex-snapshot
Peptide .alpha.-keto ester, .alpha.-keto amide, and .alpha.-keto acid inhibitors of calpains and other cysteine proteases
inferredcites →https://doi.org/10.1021/jm001044lopenalex-snapshot
Protein-Based Virtual Screening of Chemical Databases. 1. Evaluation of Different Docking/Scoring Combinations
inferredcites →https://doi.org/10.1021/jm0493717openalex-snapshot
Identification of Novel Parasitic Cysteine Protease Inhibitors Using Virtual Screening. 1. The ChemBridge Database
inferredcites →https://doi.org/10.1021/jm0505765openalex-snapshot
Identification of Novel Parasitic Cysteine Protease Inhibitors by Use of Virtual Screening. 2. The Available Chemical Directory
inferredcites →https://doi.org/10.1021/jm0608356openalex-snapshot
Benchmarking Sets for Molecular Docking
inferredcites →https://doi.org/10.1021/jm100556bopenalex-snapshot
Falcipain Inhibitors: Optimization Studies of the 2-Pyrimidinecarbonitrile Lead Series
inferredcites →https://doi.org/10.1021/jm8008597openalex-snapshot
Covalent Modifiers: An Orthogonal Approach to Drug Design
inferredcites →https://doi.org/10.1021/jm8013663openalex-snapshot
Structures of Falcipain-2 and Falcipain-3 Bound to Small Molecule Inhibitors: Implications for Substrate Specificity
inferredcites →https://doi.org/10.1021/jm801622xopenalex-snapshot
Identification of Novel Falcipain-2 Inhibitors as Potential Antimalarial Agents through Structure-Based Virtual Screening
inferredcites →https://doi.org/10.1021/jm901633vopenalex-snapshot
Nonpeptidic Tetrafluorophenoxymethyl Ketone Cruzain Inhibitors as Promising New Leads for Chagas Disease Chemotherapy
inferredcites →https://doi.org/10.1021/jm970266popenalex-snapshot
Synthesis and Antimalarial Effects of Phenothiazine Inhibitors of a Plasmodium falciparum Cysteine Protease
inferredcites →https://doi.org/10.1021/jm980249fopenalex-snapshot
Use of Papain as a Model for the Structure-Based Design of Cathepsin K Inhibitors: Crystal Structures of Two Papain−Inhibitor Complexes Demonstrate Binding to S‘-Subsites
inferredcites →https://doi.org/10.1021/jp036416ropenalex-snapshot
Condensation of Frontier Molecular Orbital Fukui Functions
inferredcites →https://doi.org/10.1021/tx00046a001openalex-snapshot
Quantitative Structure-Activity Relationships Based on Computer Calculated Parameters for the Overall Rate of Glutathione S-Transferase Catalyzed Conjugation of a Series of Fluoronitrobenzenes
inferredcites →https://doi.org/10.1038/415680aopenalex-snapshot
The economic and social burden of malaria
inferredcites →https://doi.org/10.1038/465297aopenalex-snapshot
Priming the antimalarial pipeline
inferredcites →https://doi.org/10.1038/nature09099openalex-snapshot
Chemical genetics of Plasmodium falciparum
inferredcites →https://doi.org/10.1038/nature09107openalex-snapshot
Thousands of chemical starting points for antimalarial lead identification
inferredcites →https://doi.org/10.1042/0264-6021:3600481openalex-snapshot
Expression and characterization of the Plasmodium falciparum haemoglobinase falcipain-3
inferredcites →https://doi.org/10.1042/bj20060422openalex-snapshot
Substrate mapping and inhibitor profiling of falcipain-2, falcipain-3 and berghepain-2: implications for peptidase anti-malarial drug discovery
inferredcites →https://doi.org/10.1073/pnas.0307720101openalex-snapshot
Gene disruption confirms a critical role for the cysteine protease falcipain-2 in hemoglobin hydrolysis by Plasmodium falciparum
inferredcites →https://doi.org/10.1073/pnas.0402738101openalex-snapshot
Plasmodium falciparum cysteine protease falcipain-1 is not essential in erythrocytic stage malaria parasites
inferredcites →https://doi.org/10.1074/jbc.m004459200openalex-snapshot
Characterization of Native and Recombinant Falcipain-2, a Principal Trophozoite Cysteine Protease and Essential Hemoglobinase ofPlasmodium falciparum
inferredcites →https://doi.org/10.1074/jbc.m109.014340openalex-snapshot
Vinyl Sulfones as Antiparasitic Agents and a Structural Basis for Drug Design
inferredcites →https://doi.org/10.1074/jbc.m603776200openalex-snapshot
Structural and Functional Characterization of Falcipain-2, a Hemoglobinase from the Malarial Parasite Plasmodium falciparum
inferredcites →https://doi.org/10.1093/bioinformatics/16.6.566openalex-snapshot
DaliLite workbench for protein structure comparison
inferredcites →https://doi.org/10.1103/physrevb.37.785openalex-snapshot
Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density
inferredcites →https://doi.org/10.1110/ps.0228103openalex-snapshot
Probing the structure of falcipain‐3, a cysteine protease from Plasmodium falciparum: Comparative protein modeling and docking studies
inferredcites →https://doi.org/10.1111/j.1365-2958.2004.04108.xopenalex-snapshot
Targeted disruption of Plasmodium falciparum cysteine protease, falcipain 1, reduces oocyst production, not erythrocytic stage growth
inferredcites →https://doi.org/10.1126/science.1077426openalex-snapshot
A Role for the Protease Falcipain 1 in Host Cell Invasion by the Human Malaria Parasite
inferredcites →https://doi.org/10.1128/aac.40.7.1600openalex-snapshot
Antimalarial effects of vinyl sulfone cysteine proteinase inhibitors
inferredcites →https://doi.org/10.1128/aac.47.1.154-160.2003openalex-snapshot
Structure-Activity Relationships for Inhibition of Cysteine Protease Activity and Development of Plasmodium falciparum by Peptidyl Vinyl Sulfones
inferredcites →https://doi.org/10.1128/aac.47.12.3810-3814.2003openalex-snapshot
Antimalarial Activities of Novel SyntheticCysteine ProteaseInhibitors
inferredcites →https://doi.org/10.1128/aem.57.7.2101-2103.1991openalex-snapshot
Cytotoxicity of T-2 toxin and its metabolites determined with the neutral red cell viability assay
inferredcites →https://doi.org/10.1172/jci113766openalex-snapshot
A malarial cysteine proteinase is necessary for hemoglobin degradation by Plasmodium falciparum.
inferredcites →https://doi.org/10.1172/jci115456openalex-snapshot
Antimalarial effects of peptide inhibitors of a Plasmodium falciparum cysteine proteinase.
inferredcites →https://doi.org/10.1172/jci116262openalex-snapshot
Inhibition of a Plasmodium vinckei cysteine proteinase cures murine malaria.
inferredcites →https://doi.org/10.1182/blood.v87.10.4448.bloodjournal87104448openalex-snapshot
Cysteine proteinase inhibitors block early steps in hemoglobin degradation by cultured malaria parasites
inferredcites →https://doi.org/10.1371/journal.pone.0005156openalex-snapshot
Hemoglobin Cleavage Site-Specificity of the Plasmodium falciparum Cysteine Proteases Falcipain-2 and Falcipain-3
inferredcites →https://doi.org/10.2174/092986706776055733openalex-snapshot
Thiol Proteases: Inhibitors and Potential Therapeutic Targets
inferredcites →https://doi.org/10.2174/092986707780090927openalex-snapshot
Recent Advances in Antimalarial Compounds and their Patents
inferredcites →https://doi.org/10.2174/1381612023394197openalex-snapshot
Cysteine Proteases of Malaria Parasites: Targets for Chemotherapy
inferredcites →https://doi.org/10.2174/157340910790980142openalex-snapshot
Computational Approaches for the Discovery of Cysteine Protease Inhibitors Against Malaria and SARS
inferredcites →https://doi.org/10.2307/3280287openalex-snapshot
Synchronization of Plasmodium falciparum Erythrocytic Stages in Culture
inferredcites →https://doi.org/10.3390/molecules14114570openalex-snapshot
The Trypanocidal Activity of Naphthoquinones: A Review
inferredcites →https://doi.org/10.4155/fmc.10.21openalex-snapshot
Strategies for Discovering and Derisking Covalent, Irreversible Enzyme Inhibitors
inferredcites →https://doi.org/10.4269/ajtmh.2004.71.179openalex-snapshot
ANTIMALARIAL DRUG RESISTANCE, ARTEMISININ-BASED COMBINATION THERAPY, AND THE CONTRIBUTION OF MODELING TO ELUCIDATING POLICY CHOICES
inferredcites →https://doi.org/10.4269/ajtmh.2007.77.181openalex-snapshot
Artemisinin-Based Combination Treatment of Falciparum Malaria

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Design, Synthesis, and Biological Evaluation of Peptidomimetic N‐Substituted Cbz‐4‐Hyp‐Hpa‐Amides as Novel Inhibitors of Plasmodium falciparum
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α‐Unsaturated 3‐Amino‐1‐carboxymethyl‐β‐lactams as Bacterial PBP Inhibitors: Synthesis and Biochemical Assessment
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Advanced Screening to Identify Novel Pesticides
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Methyl-methoxylpyrrolinone and flavinium nucleus binding signatures on falcipain-2 active site
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Novel anti-Plasmodial hits identified by virtual screening of the ZINC database
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Creating and virtually screening databases of fluorescently-labelled compounds for the discovery of target-specific molecular probes
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New quinoline- and isoquinoline-based multicomponent methods for the synthesis of 1,1(3,3)-dicyanotetrahydrobenzoindolizines
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Falcipains as drug targets in antimalarial therapy
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Identification of (4-(9H-fluoren-9-yl) piperazin-1-yl) methanone derivatives as falcipain 2 inhibitors active against Plasmodium falciparum cultures
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Falcipain-2 inhibition by suramin and suramin analogues
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Discovery of new antimalarial agents: Second-generation dual inhibitors against FP-2 and PfDHFR via fragments assembely
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Synthesis and characterization of indolizine and 5,6-benzo-fused indolizine derivatives with their pharmacological applications
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Current progress in antimalarial pharmacotherapy and multi-target drug discovery
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Falcipain-2: A review on structurally diverse non-peptide inhibitors
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Serum albumin as a probe for testing the selectivity of irreversible cysteine protease inhibitors: The case of vinyl sulfones
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Structure Based Docking and Molecular Dynamic Studies of Plasmodial Cysteine Proteases against a South African Natural Compound and its Analogs
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Structural features of falcipain-3 inhibitors: an in silico study
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Recent advances in transition-metal-catalyzed reactions of alkynes with isoxazoles
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