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A Self-Activated Mechanism for Nucleic Acid Polymerization Catalyzed by DNA/RNA Polymerases

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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QM/MM Methods for Biomolecular Systems

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Exploring the role of large conformational changes in the fidelity of DNA polymerase β

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DNA- and RNA-dependent DNA polymerases

inferredcites →https://doi.org/10.1016/j.molcel.2006.03.013openalex-snapshot

Making and Breaking Nucleic Acids: Two-Mg2+-Ion Catalysis and Substrate Specificity

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Human DNA Polymerase κ Encircles DNA: Implications for Mismatch Extension and Lesion Bypass

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Investigating biological systems using first principles Car–Parrinello molecular dynamics simulations

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The Mechanism of the Translocation Step in DNA Replication by DNA Polymerase I: A Computer Simulation Analysis

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The Closing Mechanism of DNA Polymerase I at Atomic Resolution

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Calculations of electrostatic interactions in biological systems and in solutions

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Comparative Molecular Dynamics Studies of Human DNA Polymerase η

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The Role and Perspective of Ab Initio Molecular Dynamics in the Study of Biological Systems

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Catalytic Metal Ions and Enzymatic Processing of DNA and RNA

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Combined Quantum Mechanical/Molecular Mechanical Methodologies Applied to Biomolecular Systems

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Modifying the β,γ Leaving-Group Bridging Oxygen Alters Nucleotide Incorporation Efficiency, Fidelity, and the Catalytic Mechanism of DNA Polymerase β

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Flexibility, Diversity, and Cooperativity: Pillars of Enzyme Catalysis

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Electrostatic Basis for Enzyme Catalysis

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Quantum and Classical Dynamics Simulations of ATP Hydrolysis in Solution

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Molecular Simulations Highlight the Role of Metals in Catalysis and Inhibition of Type II Topoisomerase

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Computer Simulation of the Chemical Catalysis of DNA Polymerases: Discriminating between Alternative Nucleotide Insertion Mechanisms for T7 DNA Polymerase

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A Water-Mediated and Substrate-Assisted Catalytic Mechanism forSulfolobus solfataricusDNA Polymerase IV

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Promiscuity in Alkaline Phosphatase Superfamily. Unraveling Evolution through Molecular Simulations

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Calcium Inhibition of Ribonuclease H1 Two-Metal Ion Catalysis

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Phosphodiester Cleavage in Ribonuclease H Occurs via an Associative Two-Metal-Aided Catalytic Mechanism

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Xeroderma Pigmentosum-Variant Patients from America, Europe, and Asia

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A Hamiltonian electrostatic coupling scheme for hybrid Car–Parrinello molecular dynamics simulations

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Computer simulations of protein functions: Searching for the molecular origin of the replication fidelity of DNA polymerases

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CBR antimicrobials inhibit RNA polymerase via at least two bridge-helix cap-mediated effects on nucleotide addition

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Requirement for transient metal ions revealed through computational analysis for DNA polymerase going in reverse

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Ground State Destabilization by Anionic Nucleophiles Contributes to the Activity of Phosphoryl Transfer Enzymes

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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