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Structural basis for dynamic mechanism of nitrate/nitrite antiport by NarK
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Scalable molecular dynamics with NAMD
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Evaluation of comparative protein modeling by M ODELLER
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Nitrate and nitrite transport in bacteria
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Nitrogen acquisition by roots: physiological and developmental mechanisms ensuring plant adaptation to a fluctuating resource
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The narK gene product participates in nitrate transport induced in Escherichia coli nitrate‐respiring cells
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[6] Use of T7 RNA polymerase to direct expression of cloned genes
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VMD: Visual molecular dynamics
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Molecular cloning of higher plant homologues of the high-affinity nitrate transporters of Chlamydomonas reinhardtii and Aspergillus nidulans
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Structure and Mechanism of a Nitrate Transporter
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Nitrate transporters and peptide transporters
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The Alternating-Access Mechanism of MFS Transporters Arises from Inverted-Topology Repeats
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Sulfide oxidation, nitrate respiration, carbon acquisition, and electron transport pathways suggested by the draft genome of a single orange Guaymas Basin Beggiatoa (Cand. Maribeggiatoa) sp. filament
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A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family members in plants
inferredcites →https://doi.org/10.1016/s0005-2736(00)00140-1openalex-snapshot
Nitrate transporters in plants: structure, function and regulation
inferredcites →https://doi.org/10.1016/s0076-6879(97)76073-7openalex-snapshot
[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods
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Detection and Imaging of Nitric Oxide with Novel Fluorescent Indicators: Diaminofluoresceins
inferredcites →https://doi.org/10.1021/jp101759qopenalex-snapshot
Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types
inferredcites →https://doi.org/10.1038/msb4100050openalex-snapshot
Construction of Escherichia coli K‐12 in‐frame, single‐gene knockout mutants: the Keio collection
inferredcites →https://doi.org/10.1038/nature12139openalex-snapshot
Crystal structure of a nitrate/nitrite exchanger
inferredcites →https://doi.org/10.1038/nature13074openalex-snapshot
Crystal structure of the plant dual-affinity nitrate transporter NRT1.1
inferredcites →https://doi.org/10.1038/nature13116openalex-snapshot
Molecular basis of nitrate uptake by the plant nitrate transporter NRT1.1
inferredcites →https://doi.org/10.1038/nprot.2009.2openalex-snapshot
Protein structure prediction on the Web: a case study using the Phyre server
inferredcites →https://doi.org/10.1038/nrmicro954openalex-snapshot
Genetic regulation of biological nitrogen fixation
inferredcites →https://doi.org/10.1042/bj20080746openalex-snapshot
A single channel for nitrate uptake, nitrite export and nitrite uptake by Escherichia coli NarU and a role for NirC in nitrite export and uptake
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Enzymology and ecology of the nitrogen cycle
inferredcites →https://doi.org/10.1046/j.1365-2958.2002.02858.xopenalex-snapshot
The roles of the polytopic membrane proteins NarK, NarU and NirC in Escherichia coli K‐12: two nitrate and three nitrite transporters
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Particle mesh Ewald: An N ⋅log( N ) method for Ewald sums in large systems
inferredcites →https://doi.org/10.1073/pnas.0405054101openalex-snapshot
Two perfectly conserved arginine residues are required for substrate binding in a high-affinity nitrate transporter
inferredcites →https://doi.org/10.1073/pnas.120163297openalex-snapshot
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
inferredcites →https://doi.org/10.1073/pnas.93.25.14532openalex-snapshot
Lipidic cubic phases: A novel concept for the crystallization of membrane proteins
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Achievement of protein micro-crystallography at SPring-8 beamline BL32XU
inferredcites →https://doi.org/10.1093/oxfordjournals.pcp.a078751openalex-snapshot
Structure, Function and Regulation of the Nitrate Transport System of the Cyanobacterium Synechococcus sp. PCC7942
inferredcites →https://doi.org/10.1099/mic.0.28688-0openalex-snapshot
Role of the Escherichia coli nitrate transport protein, NarU, in survival during severe nutrient starvation and slow growth
inferredcites →https://doi.org/10.1105/tpc.104.029694openalex-snapshot
Structural Basis of Eukaryotic Nitrate Reduction: Crystal Structures of the Nitrate Reductase Active Site
inferredcites →https://doi.org/10.1107/97809553602060000865openalex-snapshot
PHENIX: a comprehensive Python-based system for macromolecular structure solution
inferredcites →https://doi.org/10.1107/s0021889807021206openalex-snapshot
Phaser crystallographic software
inferredcites →https://doi.org/10.1107/s0907444902011678openalex-snapshot
Substructure solution withSHELXD
inferredcites →https://doi.org/10.1107/s0907444902016657openalex-snapshot
PHENIX : building new software for automated crystallographic structure determination
inferredcites →https://doi.org/10.1107/s0907444904019158openalex-snapshot
Coot : model-building tools for molecular graphics
inferredcites →https://doi.org/10.1107/s0907444909052925openalex-snapshot
PHENIX : a comprehensive Python-based system for macromolecular structure solution
inferredcites →https://doi.org/10.1107/s0907444910007493openalex-snapshot
Features and development of Coot
inferredcites →https://doi.org/10.1107/s0907444992007698openalex-snapshot
Improvement of macromolecular electron-density maps by the simultaneous application of real and reciprocal space constraints
inferredcites →https://doi.org/10.1107/s0907444995008754openalex-snapshot
Methods used in the structure determination of bovine mitochondrial F1 ATPase
inferredcites →https://doi.org/10.1111/j.1365-2958.1994.tb01044.xopenalex-snapshot
Nark is a nitrite‐extrusion system involved in anaerobic nitrate respiration by Escherichia coli
inferredcites →https://doi.org/10.1126/science.1087619openalex-snapshot
Structure and Mechanism of the Glycerol-3-Phosphate Transporter from Escherichia coli
inferredcites →https://doi.org/10.1126/science.1239002openalex-snapshot
Structural Basis for the Counter-Transport Mechanism of a H + /Ca 2+ Exchanger
inferredcites →https://doi.org/10.1128/jb.151.2.788-799.1982openalex-snapshot
Nitrate reductase in Escherichia coli K-12: involvement of chlC, chlE, and chlG loci
inferredcites →https://doi.org/10.1128/jb.173.11.3303-3310.1991openalex-snapshot
NarK enhances nitrate uptake and nitrite excretion in Escherichia coli
inferredcites →https://doi.org/10.1128/mmbr.52.2.190-232.1988openalex-snapshot
Nitrate respiration in relation to facultative metabolism in enterobacteria
inferredcites →https://doi.org/10.1128/mmbr.62.1.1-34.1998openalex-snapshot
Major Facilitator Superfamily
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Lipid Cubic Phase for Membrane Protein X-ray Crystallography
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How do antiporters exchange substrates across the cell membrane? An atomic-level description of the complete exchange cycle in NarK
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