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ChIP-Seq identification of weakly conserved heart enhancers
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1016/j.ahj.2003.05.003openalex-snapshot
Prevalence of congenital heart disease
inferredcites →https://doi.org/10.1016/j.cell.2006.09.003openalex-snapshot
Making or Breaking the Heart: From Lineage Determination to Morphogenesis
inferredcites →https://doi.org/10.1016/j.cell.2008.04.043openalex-snapshot
Integration of External Signaling Pathways with the Core Transcriptional Network in Embryonic Stem Cells
inferredcites →https://doi.org/10.1016/s0092-8674(00)81165-4openalex-snapshot
Gene Dosage–Dependent Embryonic Development and Proliferation Defects in Mice Lacking the Transcriptional Integrator p300
inferredcites →https://doi.org/10.1038/335435a0openalex-snapshot
A transgene containing lacZ inserted into the dystonia locus is expressed in neural tube
inferredcites →https://doi.org/10.1038/75556openalex-snapshot
Gene Ontology: tool for the unification of biology
inferredcites →https://doi.org/10.1038/nature05295openalex-snapshot
In vivo enhancer analysis of human conserved non-coding sequences
inferredcites →https://doi.org/10.1038/nature05634openalex-snapshot
The delayed rise of present-day mammals
inferredcites →https://doi.org/10.1038/nature05874openalex-snapshot
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
inferredcites →https://doi.org/10.1038/nature06801openalex-snapshot
The developmental genetics of congenital heart disease
inferredcites →https://doi.org/10.1038/nature07730openalex-snapshot
ChIP-seq accurately predicts tissue-specific activity of enhancers
inferredcites →https://doi.org/10.1038/nature07829openalex-snapshot
Histone modifications at human enhancers reflect global cell-type-specific gene expression
inferredcites →https://doi.org/10.1038/nature08451openalex-snapshot
Genomic views of distant-acting enhancers
inferredcites →https://doi.org/10.1038/ng.2007.55openalex-snapshot
Ultraconservation identifies a small subset of extremely constrained developmental enhancers
inferredcites →https://doi.org/10.1038/ng1966openalex-snapshot
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
inferredcites →https://doi.org/10.1038/nmeth.1246openalex-snapshot
Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data
inferredcites →https://doi.org/10.1038/nrg929openalex-snapshot
The origin and evolution of model organisms
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A global transcriptional regulatory role for c-Myc in Burkitt's lymphoma cells
inferredcites →https://doi.org/10.1073/pnas.92.5.1684openalex-snapshot
Detecting conserved regulatory elements with the model genome of the Japanese puffer fish, Fugu rubripes.
inferredcites →https://doi.org/10.1086/426833openalex-snapshot
Long-Range Control of Gene Expression: Emerging Mechanisms and Disruption in Disease
inferredcites →https://doi.org/10.1093/bioinformatics/14.1.48openalex-snapshot
Combining evidence using p-values: application to sequence homology searches.
inferredcites →https://doi.org/10.1093/nar/gkl822openalex-snapshot
VISTA Enhancer Browser--a database of tissue-specific human enhancers
inferredcites →https://doi.org/10.1093/nar/gkm955openalex-snapshot
JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update
inferredcites →https://doi.org/10.1093/nar/gkn875openalex-snapshot
The UCSC Genome Browser Database: update 2009
inferredcites →https://doi.org/10.1101/gr.076091.108openalex-snapshot
Identification of ancient remains through genomic sequencing
inferredcites →https://doi.org/10.1101/gr.083089.108openalex-snapshot
Transcriptional enhancement by GATA1-occupied DNA segments is strongly associated with evolutionary constraint on the binding site motif
inferredcites →https://doi.org/10.1101/gr.098657.109openalex-snapshot
Genome-wide discovery of human heart enhancers
inferredcites →https://doi.org/10.1101/gr.1933104openalex-snapshot
Aligning Multiple Genomic Sequences With the Threaded Blockset Aligner
inferredcites →https://doi.org/10.1101/gr.3715005openalex-snapshot
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
inferredcites →https://doi.org/10.1101/gr.4004805openalex-snapshot
A functional survey of the enhancer activity of conserved non-coding sequences from vertebrateIroquoiscluster gene deserts
inferredcites →https://doi.org/10.1101/gr.4717506openalex-snapshot
Close sequence comparisons are sufficient to identify human cis -regulatory elements
inferredcites →https://doi.org/10.1101/gr.5592107openalex-snapshot
Finding cis-regulatory elements using comparative genomics: Some lessons from ENCODE data
inferredcites →https://doi.org/10.1101/gr.5918807openalex-snapshot
Using genomic data to unravel the root of the placental mammal phylogeny
inferredcites →https://doi.org/10.1101/gr.6034307openalex-snapshot
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome
inferredcites →https://doi.org/10.1101/gr.6654808openalex-snapshot
Genome-wide mapping and analysis of active promoters in mouse embryonic stem cells and adult organs
inferredcites →https://doi.org/10.1101/gr.7205808openalex-snapshot
Qualifying the relationship between sequence conservation and molecular function
inferredcites →https://doi.org/10.1126/science.1088328openalex-snapshot
Scanning Human Gene Deserts for Long-Range Enhancers
inferredcites →https://doi.org/10.1126/science.1124070openalex-snapshot
Conservation of RET Regulatory Function from Human to Zebrafish Without Sequence Similarity
inferredcites →https://doi.org/10.1126/science.1132292openalex-snapshot
Gene Regulatory Networks in the Evolution and Development of the Heart
inferredcites →https://doi.org/10.1161/circulationaha.106.183056openalex-snapshot
Genetic Basis for Congenital Heart Defects: Current Knowledge
inferredcites →https://doi.org/10.1161/circulationaha.108.191259openalex-snapshot
Heart Disease and Stroke Statistics—2009 Update
inferredcites →https://doi.org/10.1196/annals.1420.003openalex-snapshot
Genetic Mechanisms Controlling Cardiovascular Development
inferredcites →https://doi.org/10.1371/journal.pbio.0030007openalex-snapshot
Highly Conserved Non-Coding Sequences Are Associated with Vertebrate Development
inferredcites →https://doi.org/10.1371/journal.pgen.0030136openalex-snapshot
Identification and Characterization of Cell Type–Specific and Ubiquitous Chromatin Regulatory Structures in the Human Genome
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.2139/ssrn.4755772openalex-extracted
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inferred← citeshttps://doi.org/10.1002/9781118444122.ch5openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/ajmg.c.31379openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/cbin.11931openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/dneu.20888openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/dvdy.22535openalex-snapshot
cis‐regulatory mutations are a genetic cause of human limb malformations
inferred← citeshttps://doi.org/10.1002/mgg3.1793openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/wdev.168openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/wsbm.1217openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/wsbm.1419openalex-snapshot
Systems analysis of dilated cardiomyopathy in the next generation sequencing era
inferred← citeshttps://doi.org/10.1002/wsbm.1467openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-1-4614-1683-8_8openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-1-61779-585-5_6openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-1-62703-080-9_23openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-3-319-73764-5_3openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-3-642-20036-6_26openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-3-642-45198-0_15openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-4-431-56609-0_31openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-981-13-8958-0_4openalex-snapshot
The Role of Nucleosomes in Epigenetic Gene Regulation
inferred← citeshttps://doi.org/10.1007/s00018-011-0693-7openalex-snapshot
Sox4 mediates Tbx3 transcriptional regulation of the gap junction protein Cx43
inferred← citeshttps://doi.org/10.1007/s00018-011-0884-2openalex-snapshot
Tbx2 and Tbx3 induce atrioventricular myocardial development and endocardial cushion formation
inferred← citeshttps://doi.org/10.1007/s00018-016-2322-yopenalex-snapshot
Spatiotemporal regulation of enhancers during cardiogenesis
inferred← citeshttps://doi.org/10.1007/s00018-021-03903-wopenalex-snapshot
Transcriptional enhancers and their communication with gene promoters
inferred← citeshttps://doi.org/10.1007/s00125-012-2797-5openalex-snapshot
Identification and analysis of murine pancreatic islet enhancers
inferred← citeshttps://doi.org/10.1007/s00427-013-0453-9openalex-snapshot
Functional analysis of limb enhancers in the developing fin
inferred← citeshttps://doi.org/10.1007/s10529-014-1523-4openalex-snapshot
Identifying and engineering promoters for high level and sustainable therapeutic recombinant protein production in cultured mammalian cells
inferred← citeshttps://doi.org/10.1007/s10741-019-09792-3openalex-snapshot
Targeting transcriptional machinery to inhibit enhancer-driven gene expression in heart failure
inferred← citeshttps://doi.org/10.1007/s11892-012-0328-xopenalex-snapshot
The Epigenome and Its Role in Diabetes
inferred← citeshttps://doi.org/10.1007/s12551-014-0145-3openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s41048-019-0089-zopenalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-12-385944-0.00004-6openalex-snapshot
Gene Regulatory Networks
inferred← citeshttps://doi.org/10.1016/b978-0-12-386499-4.00005-7openalex-snapshot
Computational Strategies for the Genome-Wide Identification of cis-Regulatory Elements and Transcriptional Targets
inferred← citeshttps://doi.org/10.1016/b978-0-12-387786-4.00004-xopenalex-snapshot
Localized and Temporal Gene Regulation in Heart Development
inferred← citeshttps://doi.org/10.1016/b978-0-12-387786-4.00005-1openalex-snapshot
Regulation of GATA4 Transcriptional Activity in Cardiovascular Development and Disease
inferred← citeshttps://doi.org/10.1016/b978-0-12-404729-7.00001-0openalex-snapshot
The Genome in Development
inferred← citeshttps://doi.org/10.1016/b978-0-12-404729-7.00004-6openalex-snapshot
Genomic Control Processes in Adult Body Part Formation
inferred← citeshttps://doi.org/10.1016/b978-0-12-814405-3.00027-8openalex-snapshot
Gene regulatory networks controlling neuronal development
inferred← citeshttps://doi.org/10.1016/j.ajhg.2012.02.025openalex-snapshot
Linkage-Disequilibrium-Based Binning Affects the Interpretation of GWASs
inferred← citeshttps://doi.org/10.1016/j.bbagrm.2012.10.008openalex-snapshot
Long distance relationships: Enhancer–promoter communication and dynamic gene transcription
inferred← citeshttps://doi.org/10.1016/j.bbamcr.2012.08.010openalex-snapshot
Small and long non-coding RNAs in cardiac homeostasis and regeneration
inferred← citeshttps://doi.org/10.1016/j.bbamcr.2015.11.026openalex-snapshot
Super-enhancer lncs to cardiovascular development and disease
inferred← citeshttps://doi.org/10.1016/j.bbamcr.2016.01.024openalex-snapshot
Exploiting the hypoxia sensitive non-coding genome for organ-specific physiologic reprogramming
inferred← citeshttps://doi.org/10.1016/j.brainres.2015.12.022openalex-snapshot
Genes expressed in mouse cortical progenitors are enriched in Pax, Lhx, and Sox transcription factor putative binding sites
inferred← citeshttps://doi.org/10.1016/j.cdev.2024.203924openalex-snapshot
Xenopus tropicalis osteoblast-specific open chromatin regions reveal promoters and enhancers involved in human skeletal phenotypes and shed light on early vertebrate evolution
inferred← citeshttps://doi.org/10.1016/j.ceb.2013.02.005openalex-snapshot
Genome organization and long-range regulation of gene expression by enhancers
inferred← citeshttps://doi.org/10.1016/j.cell.2011.01.024openalex-snapshot
Functional and Mechanistic Diversity of Distal Transcription Enhancers
inferred← citeshttps://doi.org/10.1016/j.cell.2012.01.030openalex-snapshot
A Transcription Factor Collective Defines Cardiac Cell Fate and Reflects Lineage History
inferred← citeshttps://doi.org/10.1016/j.cell.2012.07.035openalex-snapshot
Dynamic and Coordinated Epigenetic Regulation of Developmental Transitions in the Cardiac Lineage
inferred← citeshttps://doi.org/10.1016/j.cell.2012.12.041openalex-snapshot
A High-Resolution Enhancer Atlas of the Developing Telencephalon
inferred← citeshttps://doi.org/10.1016/j.cell.2013.10.058openalex-snapshot
Leveraging Cross-Species Transcription Factor Binding Site Patterns: From Diabetes Risk Loci to Disease Mechanisms
inferred← citeshttps://doi.org/10.1016/j.cell.2013.11.033openalex-snapshot
Rapid and Pervasive Changes in Genome-wide Enhancer Usage during Mammalian Development
inferred← citeshttps://doi.org/10.1016/j.cell.2016.09.018openalex-snapshot
Ever-Changing Landscapes: Transcriptional Enhancers in Development and Evolution
inferred← citeshttps://doi.org/10.1016/j.cell.2016.09.028openalex-snapshot
Progressive Loss of Function in a Limb Enhancer during Snake Evolution
inferred← citeshttps://doi.org/10.1016/j.cell.2020.02.031openalex-snapshot
Comprehensive In Vivo Interrogation Reveals Phenotypic Impact of Human Enhancer Variants
inferred← citeshttps://doi.org/10.1016/j.celrep.2013.03.029openalex-snapshot
Analysis of the DNA-Binding Profile and Function of TALE Homeoproteins Reveals Their Specialization and Specific Interactions with Hox Genes/Proteins
inferred← citeshttps://doi.org/10.1016/j.celrep.2015.08.065openalex-snapshot
Sequential Binding of MEIS1 and NKX2-5 on the Popdc2 Gene: A Mechanism for Spatiotemporal Regulation of Enhancers during Cardiogenesis
inferred← citeshttps://doi.org/10.1016/j.celrep.2016.10.082openalex-snapshot
Nfix Induces a Switch in Sox6 Transcriptional Activity to Regulate MyHC-I Expression in Fetal Muscle
inferred← citeshttps://doi.org/10.1016/j.celrep.2019.01.032openalex-snapshot
Enhancer Histone Acetylation Modulates Transcriptional Bursting Dynamics of Neuronal Activity-Inducible Genes
inferred← citeshttps://doi.org/10.1016/j.celrep.2019.08.020openalex-snapshot
A Unique Epigenomic Landscape Defines Human Erythropoiesis
inferred← citeshttps://doi.org/10.1016/j.celrep.2020.108472openalex-snapshot
Cell-Type-Specific Gene Regulatory Networks Underlying Murine Neonatal Heart Regeneration at Single-Cell Resolution
inferred← citeshttps://doi.org/10.1016/j.cub.2013.11.026openalex-snapshot
Development: Facial Makeup Enhancing Our Looks
inferred← citeshttps://doi.org/10.1016/j.devcel.2011.06.008openalex-snapshot
Enhancers: From Developmental Genetics to the Genetics of Common Human Disease
inferred← citeshttps://doi.org/10.1016/j.devcel.2012.09.003openalex-snapshot
Combinatorial Assembly of Developmental Stage-Specific Enhancers Controls Gene Expression Programs during Human Erythropoiesis
inferred← citeshttps://doi.org/10.1016/j.devcel.2013.01.025openalex-snapshot
An Integrated Holo-Enhancer Unit Defines Tissue and Gene Specificity of the Fgf8 Regulatory Landscape
inferred← citeshttps://doi.org/10.1016/j.devcel.2013.04.017openalex-snapshot
Atrial Identity Is Determined by a COUP-TFII Regulatory Network
inferred← citeshttps://doi.org/10.1016/j.diff.2019.05.001openalex-snapshot
Navigating the non-coding genome in heart development and Congenital Heart Disease
inferred← citeshttps://doi.org/10.1016/j.molcel.2013.01.038openalex-snapshot
Modification of Enhancer Chromatin: What, How, and Why?
inferred← citeshttps://doi.org/10.1016/j.neulet.2016.12.032openalex-snapshot
Selecting optimal combinations of transcription factors to promote axon regeneration: Why mechanisms matter
inferred← citeshttps://doi.org/10.1016/j.neuron.2014.11.011openalex-snapshot
Genomic Perspectives of Transcriptional Regulation in Forebrain Development
inferred← citeshttps://doi.org/10.1016/j.physa.2017.04.062openalex-snapshot
Weighted measures based on maximizing deviation for alignment-free sequence comparison
inferred← citeshttps://doi.org/10.1016/j.pneurobio.2010.11.003openalex-snapshot
Zebrafish: An integrative system for neurogenomics and neurosciences
inferred← citeshttps://doi.org/10.1016/j.semcdb.2025.103610openalex-snapshot
Cardiac enhancers: Gateway to the regulatory mechanisms of heart regeneration
inferred← citeshttps://doi.org/10.1016/j.stem.2019.03.022openalex-snapshot
Cardiac Reprogramming Factors Synergistically Activate Genome-wide Cardiogenic Stage-Specific Enhancers
inferred← citeshttps://doi.org/10.1016/j.tcb.2012.04.003openalex-snapshot
Landscapes and archipelagos: spatial organization of gene regulation in vertebrates
inferred← citeshttps://doi.org/10.1016/j.tcb.2013.10.008openalex-snapshot
Distal enhancers: new insights into heart development and disease
inferred← citeshttps://doi.org/10.1016/j.tcm.2015.01.014openalex-snapshot
The promise of enhancer-associated long noncoding RNAs in cardiac regeneration
inferred← citeshttps://doi.org/10.1016/j.tcm.2015.02.010openalex-snapshot
Enhancer-associated long noncoding RNAs: A novel frontier with new perception in cardiac regeneration
inferred← citeshttps://doi.org/10.1016/j.tibs.2020.08.007openalex-snapshot
Spirits in the Material World: Enhancer RNAs in Transcriptional Regulation
inferred← citeshttps://doi.org/10.1016/j.tig.2012.09.007openalex-snapshot
Deciphering the transcriptional cis-regulatory code
inferred← citeshttps://doi.org/10.1016/j.tig.2016.03.001openalex-snapshot
Evolution of Epigenetic Regulation in Vertebrate Genomes
inferred← citeshttps://doi.org/10.1016/j.ydbio.2010.11.026openalex-snapshot
When needles look like hay: How to find tissue-specific enhancers in model organism genomes
inferred← citeshttps://doi.org/10.1016/j.ydbio.2011.10.002openalex-snapshot
Integrated microarray and ChIP analysis identifies multiple Foxa2 dependent target genes in the notochord
inferred← citeshttps://doi.org/10.1016/j.ydbio.2011.10.023openalex-snapshot
ETS-dependent regulation of a distal Gata4 cardiac enhancer
inferred← citeshttps://doi.org/10.1016/j.ydbio.2012.05.035openalex-snapshot
Integration of the transcriptional networks regulating limb morphogenesis
inferred← citeshttps://doi.org/10.1016/j.ydbio.2012.10.017openalex-snapshot
Spatiotemporal regulation of an Hcn4 enhancer defines a role for Mef2c and HDACs in cardiac electrical patterning
inferred← citeshttps://doi.org/10.1016/j.ydbio.2012.11.007openalex-snapshot
Evolutionary conservation of Nkx2.5 autoregulation in the second heart field
inferred← citeshttps://doi.org/10.1016/j.ydbio.2017.06.033openalex-snapshot
Automated tools for comparative sequence analysis of genic regions using the GenePalette application
inferred← citeshttps://doi.org/10.1016/j.ydbio.2020.07.003openalex-snapshot
Conjugated activation of myocardial-specific transcription of Gja5 by a pair of Nkx2-5-Shox2 co-responsive elements
inferred← citeshttps://doi.org/10.1016/j.ygeno.2015.06.006openalex-snapshot
Discovering enhancers by mapping chromatin features in primary tissue
inferred← citeshttps://doi.org/10.1016/j.ygeno.2015.06.008openalex-snapshot
Learning about mammalian gene regulation from functional enhancer assays in the mouse
inferred← citeshttps://doi.org/10.1016/j.yjmcc.2011.12.014openalex-snapshot
Common genetic variation modulating cardiac ECG parameters and susceptibility to sudden cardiac death
inferred← citeshttps://doi.org/10.1016/j.yjmcc.2014.08.009openalex-snapshot
Functional importance of cardiac enhancer-associated noncoding RNAs in heart development and disease
inferred← citeshttps://doi.org/10.1016/j.yjmcc.2015.09.016openalex-snapshot
CARMEN, a human super enhancer-associated long noncoding RNA controlling cardiac specification, differentiation and homeostasis
inferred← citeshttps://doi.org/10.1016/j.yjmcc.2015.10.033openalex-snapshot
Chromatin remodeling permits cardiac hypertrophy to develop
inferred← citeshttps://doi.org/10.1016/j.yjmcc.2018.02.003openalex-snapshot
Analysis of rat cardiac myocytes and fibroblasts identifies combinatorial enhancer organization and transcription factor families
inferred← citeshttps://doi.org/10.1016/j.ymeth.2013.03.021openalex-snapshot
Non-coding transcription at cis-regulatory elements: Computational and experimental approaches
inferred← citeshttps://doi.org/10.1016/j.ymeth.2014.10.008openalex-snapshot
Computational schemes for the prediction and annotation of enhancers from epigenomic assays
inferred← citeshttps://doi.org/10.1038/embor.2012.52openalex-snapshot
Enhancers: emerging roles in cell fate specification
inferred← citeshttps://doi.org/10.1038/gene.2012.4openalex-snapshot
Evidence for an intronic cis-regulatory element within CD69 gene
inferred← citeshttps://doi.org/10.1038/jhg.2015.84openalex-snapshot
Elucidating the mechanisms of transcription regulation during heart development by next-generation sequencing
inferred← citeshttps://doi.org/10.1038/nature17644openalex-snapshot
Modulation of tissue repair by regeneration enhancer elements
inferred← citeshttps://doi.org/10.1038/nature25983openalex-snapshot
De novo mutations in regulatory elements in neurodevelopmental disorders
inferred← citeshttps://doi.org/10.1038/nbt.2136openalex-snapshot
Massively parallel functional dissection of mammalian enhancers in vivo
inferred← citeshttps://doi.org/10.1038/ncomms12923openalex-snapshot
Genome-wide compendium and functional assessment of in vivo heart enhancers
inferred← citeshttps://doi.org/10.1038/ncomms5907openalex-snapshot
Dynamic GATA4 enhancers shape the chromatin landscape central to heart development and disease
inferred← citeshttps://doi.org/10.1038/ncomms7315openalex-snapshot
Developmental enhancers revealed by extensive DNA methylome maps of zebrafish early embryos
inferred← citeshttps://doi.org/10.1038/ncomms7644openalex-snapshot
A family of transposable elements co-opted into developmental enhancers in the mouse neocortex
inferred← citeshttps://doi.org/10.1038/ncomms7904openalex-snapshot
Long-range evolutionary constraints reveal cis-regulatory interactions on the human X chromosome
inferred← citeshttps://doi.org/10.1038/ng.1006openalex-snapshot
Large-scale discovery of enhancers from human heart tissue
inferred← citeshttps://doi.org/10.1038/ng.2713openalex-snapshot
Massively parallel decoding of mammalian regulatory sequences supports a flexible organizational model
inferred← citeshttps://doi.org/10.1038/ng.2746openalex-snapshot
Epigenetic memory at embryonic enhancers identified in DNA methylation maps from adult mouse tissues
inferred← citeshttps://doi.org/10.1038/ng.840openalex-snapshot
Principles for the post-GWAS functional characterization of cancer risk loci
inferred← citeshttps://doi.org/10.1038/ng0910-734openalex-snapshot
Variable evolutionary signatures at the heart of enhancers
inferred← citeshttps://doi.org/10.1038/nm.4368openalex-snapshot
Mutations in ACTRT1 and its enhancer RNA elements lead to aberrant activation of Hedgehog signaling in inherited and sporadic basal cell carcinomas
inferred← citeshttps://doi.org/10.1038/npre.2010.5162.1openalex-snapshot
Principles for the post-GWAS functional characterisation of risk loci
inferred← citeshttps://doi.org/10.1038/npre.2011.5162.2openalex-snapshot
Principles for the post-GWAS functional characterisation of risk loci
inferred← citeshttps://doi.org/10.1038/nprot.2012.049openalex-snapshot
Cell type–specific chromatin immunoprecipitation from multicellular complex samples using BiTS-ChIP
inferred← citeshttps://doi.org/10.1038/nprot.2012.088openalex-snapshot
A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs
inferred← citeshttps://doi.org/10.1038/nrcardio.2015.55openalex-snapshot
Long noncoding RNAs in cardiac development and ageing
inferred← citeshttps://doi.org/10.1038/nrg2957openalex-snapshot
Enhancer function: new insights into the regulation of tissue-specific gene expression
inferred← citeshttps://doi.org/10.1038/nrg2983openalex-snapshot
Heart failure: advances through genomics
inferred← citeshttps://doi.org/10.1038/nrg3046openalex-snapshot
Needles in stacks of needles: finding disease-causal variants in a wealth of genomic data
inferred← citeshttps://doi.org/10.1038/nrg3242openalex-snapshot
Genomic approaches towards finding cis-regulatory modules in animals
inferred← citeshttps://doi.org/10.1038/nrg3682openalex-snapshot
Transcriptional enhancers: from properties to genome-wide predictions
inferred← citeshttps://doi.org/10.1038/s41422-018-0096-5openalex-snapshot
Accurate annotation of accessible chromatin in mouse and human primordial germ cells
inferred← citeshttps://doi.org/10.1038/s41467-018-07451-zopenalex-snapshot
Heart enhancers with deeply conserved regulatory activity are established early in zebrafish development
inferred← citeshttps://doi.org/10.1038/s41467-019-12046-3openalex-snapshot
Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration
inferred← citeshttps://doi.org/10.1038/s41467-019-12812-3openalex-snapshot
A reference map of murine cardiac transcription factor chromatin occupancy identifies dynamic and conserved enhancers
inferred← citeshttps://doi.org/10.1038/s41467-024-46850-3openalex-snapshot
Cis-regulatory interfaces reveal the molecular mechanisms underlying the notochord gene regulatory network of Ciona
inferred← citeshttps://doi.org/10.1038/s41467-024-47391-5openalex-snapshot
Emergence of enhancers at late DNA replicating regions
inferred← citeshttps://doi.org/10.1038/s41467-025-65362-2openalex-snapshot
Motif-based models accurately predict cell type-specific distal regulatory elements
inferred← citeshttps://doi.org/10.1038/s41569-021-00597-2openalex-snapshot
Genomic enhancers in cardiac development and disease
inferred← citeshttps://doi.org/10.1038/s41569-025-01223-1openalex-snapshot
Cardiac epigenome in heart development and disease
inferred← citeshttps://doi.org/10.1038/s41576-019-0209-0openalex-snapshot
Towards a comprehensive catalogue of validated and target-linked human enhancers
inferred← citeshttps://doi.org/10.1038/s41576-025-00864-9openalex-snapshot
The evolutionary foundations of transcriptional regulation in animals
inferred← citeshttps://doi.org/10.1038/s41588-020-0652-zopenalex-snapshot
Genomic analyses implicate noncoding de novo variants in congenital heart disease
inferred← citeshttps://doi.org/10.1038/s41588-024-01669-yopenalex-snapshot
Functional dissection of human cardiac enhancers and noncoding de novo variants in congenital heart disease
inferred← citeshttps://doi.org/10.1038/s41588-025-02194-2openalex-snapshot
Genome synteny reveals hidden enhancer conservation
inferred← citeshttps://doi.org/10.1038/s41588-025-02202-5openalex-snapshot
Conservation of regulatory elements with highly diverged sequences across large evolutionary distances
inferred← citeshttps://doi.org/10.1038/s41594-020-0446-0openalex-snapshot
Enhancer RNAs are an important regulatory layer of the epigenome
inferred← citeshttps://doi.org/10.1038/s41598-018-32565-1openalex-snapshot
Identification of a limb enhancer that is removed by pathogenic deletions downstream of the SHOX gene
inferred← citeshttps://doi.org/10.1038/s41598-019-39078-5openalex-snapshot
Nkx2–5 Second Heart Field Target Gene Ccdc117 Regulates DNA Metabolism and Proliferation
inferred← citeshttps://doi.org/10.1038/s44161-022-00129-2openalex-snapshot
Human specificity encoded in the dark matter of the genome
inferred← citeshttps://doi.org/10.1038/srep02390openalex-snapshot
Stepwise acetyltransferase association and histone acetylation at the Myod1 locus during myogenic differentiation
inferred← citeshttps://doi.org/10.1038/srep05152openalex-snapshot
Fully automated high-throughput chromatin immunoprecipitation for ChIP-seq: Identifying ChIP-quality p300 monoclonal antibodies
inferred← citeshttps://doi.org/10.1038/srep13727openalex-snapshot
Molecular Basis for the Regulation of Transcriptional Coactivator p300 in Myogenic Differentiation
inferred← citeshttps://doi.org/10.1038/srep28517openalex-snapshot
PEDLA: predicting enhancers with a deep learning-based algorithmic framework
inferred← citeshttps://doi.org/10.1039/c1mb05116dopenalex-snapshot
Fishing for function: zebrafish BAC transgenics for functional genomics
inferred← citeshttps://doi.org/10.1039/c3ra40332gopenalex-snapshot
Identifying distal cis-acting gene-regulatory sequences by expressing BACs functionalized with loxP-Tn10 transposons in zebrafish
inferred← citeshttps://doi.org/10.1051/jbio/2011010openalex-snapshot
Cis -ruptions d’éléments génomiques hautement conservés non codants à distance du gène SOX9 dans la séquence de Pierre Robin
inferred← citeshttps://doi.org/10.1073/pnas.1016959108openalex-snapshot
Co-occupancy by multiple cardiac transcription factors identifies transcriptional enhancers active in heart
inferred← citeshttps://doi.org/10.1073/pnas.1112213108openalex-snapshot
Transcriptional programs in transient embryonic zones of the cerebral cortex defined by high-resolution mRNA sequencing
inferred← citeshttps://doi.org/10.1073/pnas.1315155110openalex-snapshot
Genome-wide analysis of histone marks identifying an epigenetic signature of promoters and enhancers underlying cardiac hypertrophy
inferred← citeshttps://doi.org/10.1074/jbc.m112.413260openalex-snapshot
Identification of Biologically Relevant Enhancers in Human Erythroid Cells
inferred← citeshttps://doi.org/10.1074/jbc.m113.463083openalex-snapshot
The Transcription Factor Atonal homolog 8 Regulates Gata4 and Friend of Gata-2 during Vertebrate Development
inferred← citeshttps://doi.org/10.1074/jbc.m114.592014openalex-snapshot
Identification of a Face Enhancer Reveals Direct Regulation of LIM Homeobox 8 (Lhx8) by Wingless-Int (WNT)/β-Catenin Signaling
inferred← citeshttps://doi.org/10.1074/jbc.r111.296491openalex-snapshot
The Chromatin Fingerprint of Gene Enhancer Elements
inferred← citeshttps://doi.org/10.1080/15592294.2018.1489659openalex-snapshot
Loci-specific histone acetylation profiles associated with transcriptional coactivator p300 during early myoblast differentiation
inferred← citeshttps://doi.org/10.1080/21541264.2019.1695492openalex-snapshot
Transcriptional control by enhancers and enhancer RNAs
inferred← citeshttps://doi.org/10.1089/cmb.2011.0185openalex-snapshot
AREM: Aligning Short Reads from ChIP-Sequencing by Expectation Maximization
inferred← citeshttps://doi.org/10.1093/abbs/gmr090openalex-snapshot
Epigenetic mechanisms in cardiac development and disease
inferred← citeshttps://doi.org/10.1093/bfgp/elt031openalex-snapshot
Gene regulatory elements of the cardiac conduction system
inferred← citeshttps://doi.org/10.1093/bfgp/elt044openalex-snapshot
Gene transcription in the zebrafish embryo: regulators and networks
inferred← citeshttps://doi.org/10.1093/bfgp/elv032openalex-snapshot
Toward understanding the evolution of vertebrate gene regulatory networks: comparative genomics and epigenomic approaches
inferred← citeshttps://doi.org/10.1093/bib/bbt067openalex-snapshot
New developments of alignment-free sequence comparison: measures, statistics and next-generation sequencing
inferred← citeshttps://doi.org/10.1093/bib/bby110openalex-snapshot
A comprehensive review of computational prediction of genome-wide features
inferred← citeshttps://doi.org/10.1093/bioinformatics/btr704openalex-snapshot
CLARE: Cracking the LAnguage of Regulatory Elements
inferred← citeshttps://doi.org/10.1093/bioinformatics/bts028openalex-snapshot
Estimation of pairwise sequence similarity of mammalian enhancers with word neighbourhood counts
inferred← citeshttps://doi.org/10.1093/bioinformatics/btt462openalex-snapshot
Multiple alignment-free sequence comparison
inferred← citeshttps://doi.org/10.1093/bioinformatics/btu444openalex-snapshot
Broad-Enrich: functional interpretation of large sets of broad genomic regions
inferred← citeshttps://doi.org/10.1093/bioinformatics/btv395openalex-snapshot
Inference of Markovian properties of molecular sequences from NGS data and applications to comparative genomics
inferred← citeshttps://doi.org/10.1093/eurheartj/ehu180openalex-snapshot
Genome-wide profiling of the cardiac transcriptome after myocardial infarction identifies novel heart-specific long non-coding RNAs
inferred← citeshttps://doi.org/10.1093/hmg/dds165openalex-snapshot
Regulatory variation in a TBX5 enhancer leads to isolated congenital heart disease
inferred← citeshttps://doi.org/10.1093/hmg/ddt163openalex-snapshot
Comparative transgenic analysis of enhancers from the human SHOX and mouse Shox2 genomic regions
inferred← citeshttps://doi.org/10.1093/hmg/ddv267openalex-snapshot
Genomic analysis reveals distinct mechanisms and functional classes of SOX10-regulated genes in melanocytes
inferred← citeshttps://doi.org/10.1093/hmg/ddw216openalex-snapshot
Identification and function of enhancers in the human genome
inferred← citeshttps://doi.org/10.1093/molbev/mst045openalex-snapshot
Exaptation of Transposable Elements into Novel Cis-Regulatory Elements: Is the Evidence Always Strong?
inferred← citeshttps://doi.org/10.1093/molbev/msv344openalex-snapshot
Accelerated Evolution of Enhancer Hotspots in the Mammal Ancestor
inferred← citeshttps://doi.org/10.1093/nar/gkaf274openalex-snapshot
A specific pluripotency-associated eRNA controls Nanog locus by shaping the epigenetic landscape and stabilizing enhancer–promoter interaction
inferred← citeshttps://doi.org/10.1093/nar/gkr1104openalex-snapshot
RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets
inferred← citeshttps://doi.org/10.1093/nar/gks1060openalex-snapshot
ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data
inferred← citeshttps://doi.org/10.1093/nar/gks595openalex-snapshot
Dynamic hydroxymethylation of deoxyribonucleic acid marks differentiation-associated enhancers
inferred← citeshttps://doi.org/10.1093/nar/gks905openalex-snapshot
Hundreds of conserved non-coding genomic regions are independently lost in mammals
inferred← citeshttps://doi.org/10.1093/nar/gkt499openalex-snapshot
Chromatin and epigenetic features of long-range gene regulation
inferred← citeshttps://doi.org/10.1093/nar/gkt557openalex-snapshot
Computational methods to detect conserved non-genic elements in phylogenetically isolated genomes: application to zebrafish
inferred← citeshttps://doi.org/10.1093/nar/gkt627openalex-snapshot
Arpeggio: harmonic compression of ChIP-seq data reveals protein-chromatin interaction signatures
inferred← citeshttps://doi.org/10.1093/nar/gku827openalex-snapshot
Genome-wide and single-cell analyses reveal a context dependent relationship between CBP recruitment and gene expression
inferred← citeshttps://doi.org/10.1093/nar/gkv1144openalex-snapshot
EMERGE: a flexible modelling framework to predict genomic regulatory elements from genomic signatures
inferred← citeshttps://doi.org/10.1093/nar/gkx1074openalex-snapshot
Conserved non-coding elements: developmental gene regulation meets genome organization
inferred← citeshttps://doi.org/10.1093/nar/gkz1199openalex-snapshot
Enhancer–gene maps in the human and zebrafish genomes using evolutionary linkage conservation
inferred← citeshttps://doi.org/10.1093/narcan/zcae018openalex-snapshot
HDAC10 inhibition represses melanoma cell growth and BRAF inhibitor resistance via upregulating SPARC expression
inferred← citeshttps://doi.org/10.1096/fj.13-245522openalex-snapshot
Noninvasive and quantitative live imaging reveals a potential stress‐responsive enhancer in the failing heart
inferred← citeshttps://doi.org/10.1098/rsob.200255openalex-snapshot
Establishment and function of chromatin modification at enhancers
inferred← citeshttps://doi.org/10.1098/rstb.2012.0358openalex-snapshot
From remote enhancers to gene regulation: charting the genome's regulatory landscapes
inferred← citeshttps://doi.org/10.1098/rstb.2012.0366openalex-snapshot
Effects of gene regulatory reprogramming on gene expression in human and mouse developing hearts
inferred← citeshttps://doi.org/10.1098/rstb.2012.0370openalex-snapshot
Deciphering cis -regulatory control in inflammatory cells
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