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Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow

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The integrase family of site‐specific recombinases: regional similarities and global diversity.
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Horizontal Gene Transfer in Microbial Genome Evolution
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The role of Bacteroides conjugative transposons in the dissemination of antibiotic resistance genes
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Actinomycete integrative and conjugative elements
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Excision and insertion of the conjugative transposon Tn916 involves a novel recombination mechanism
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A group II intron in a conjugative transposon from the gram-positive bacterium, Clostridium difficile
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Interactions between Inner Membrane Proteins in Donor and Recipient Cells Limit Conjugal DNA Transfer
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The Orf18 Gene Product from Conjugative Transposon Tn916 Is an ArdA Antirestriction Protein that Inhibits Type I DNA Restriction–Modification Systems
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The current ICE age: Biology and evolution of SXT-related integrating conjugative elements
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Shaping bacterial genomes with integrative and conjugative elements
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A modular master on the move: the Tn916 family of mobile genetic elements
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When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum
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Horizontal gene transfer and the origin of species: lessons from bacteria
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Plasmid and chromosome segregation in prokaryotes
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Bacterial type IV secretion: conjugation systems adapted to deliver effector molecules to host cells
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Lateral gene transfer and the nature of bacterial innovation
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Pseudomonas biofilm formation and antibiotic resistance are linked to phenotypic variation
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SOS response promotes horizontal dissemination of antibiotic resistance genes
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Horizontal gene transfer, genome innovation and evolution
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Mechanisms of, and Barriers to, Horizontal Gene Transfer between Bacteria
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The versatile bacterial type IV secretion systems
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Circularization of Tn916 is required for expression of the transposon‐encoded transfer functions: characterization of long tetracycline‐inducible transcripts reading through the attachment site
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Regulation of excision of the conjugative transposon Tn916
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Site‐specific integration of the conjugal Vibrio cholerae SXT element into prfC
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Identification of genes required for excision of CTnDOT, a Bacteroides conjugative transposon
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The integrative element pSAM2 from Streptomyces: kinetics and mode of conjugal transfer
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Xis protein of the conjugative transposon Tn916 plays dual opposing roles in transposon excision
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Bacterial conjugation: a two‐step mechanism for DNA transport
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Conjugative transposons: the tip of the iceberg
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Characterization of Exc, a novel protein required for the excision of Bacteroides conjugative transposon
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Conjugal immunity of Streptomyces strains carrying the integrative element pSAM2 is due to the pif gene (pSAM2 immunity factor)
inferredcites →https://doi.org/10.1046/j.1365-2958.2003.03548.xopenalex-snapshot
Characterization of two alternative promoters for integrase expression in the clc genomic island of Pseudomonas sp. strain B13
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Community shifts in a seeded 3‐chlorobenzoate degrading membrane biofilm reactor: indications for involvement of in situ horizontal transfer of the clc ‐element from inoculum to contaminant bacteria
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The broad host range pathogen Pseudomonas aeruginosa strain PA14 carries two pathogenicity islands harboring plant and animal virulence genes
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Regulation of a Bacillus subtilis mobile genetic element by intercellular signaling and the global DNA damage response
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Interstrain transfer of the large pathogenicity island (PAPI-1) of Pseudomonas aeruginosa
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Host and invader impact of transfer of the clc genomic island into Pseudomonas aeruginosa PAO1
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Stochasticity and bistability in horizontal transfer control of a genomic island in Pseudomonas
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Nicking-closing activity associated with bacteriophage lambda int gene product.
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An intermediate in transposition of the conjugative transposon Tn916.
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Nodulating strains of Rhizobium loti arise through chromosomal symbiotic gene transfer in the environment.
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Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene
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The Whole-genome Sequencing of the Obligate Intracellular Bacterium Orientia tsutsugamushi Revealed Massive Gene Amplification During Reductive Genome Evolution
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Amelioration of the Cost of Conjugative Plasmid Carriage in Eschericha coli K12
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A molecular analysis of Greek and UK Haemophilus influenzae conjugative resistance plasmids
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Epidemiological studies of large resistance plasmids in Haemophilus
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The integrase family of tyrosine recombinases: evolution of a conserved active site domain
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Similarities and differences among 105 members of the Int family of site-specific recombinases
inferredcites →https://doi.org/10.1093/nar/29.11.2205openalex-snapshot
Control of directionality in integrase-mediated recombination: examination of recombination directionality factors (RDFs) including Xis and Cox proteins
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Genomics of bacteria and archaea: the emerging dynamic view of the prokaryotic world
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Prokaryotic Evolution in Light of Gene Transfer
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Effects of carriage and expression of the Tn10 tetracycline-resistance operon on the fitness of Escherichia coli K12.
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Genetic analysis of a tetracycline resistance element from Clostridium difficile and its conjugal transfer to and from Bacillus subtilis
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Use of an excision reporter plasmid to study the intracellular mobility of the conjugative transposon Tn916 in Gram-positive bacteria
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An Infective Factor Controlling Sex Compatibility in Bacterium coli
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Evolution of genomic islands by deletion and tandem accretion by site-specific recombination: ICESt1-related elements from Streptococcus thermophilus
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Epistatic effects of promoter and repressor functions of the Tn 10 tetracycline‐resistance operon on the fitness of Escherichia coli
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Mode and origin of replication of pSAM2, a conjugative integrating element of Streptomyces ambofaciens
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Conjugative transposition of Tn 916 : preferred targets and evidence for conjugative transfer of a single strand and for a double‐stranded circular intermediate
inferredcites →https://doi.org/10.1111/j.1365-2958.2004.04292.xopenalex-snapshot
Symbiotic phenotypes and translocated effector proteins of the Mesorhizobium loti strain R7A VirB/D4 type IV secretion system
inferredcites →https://doi.org/10.1111/j.1365-2958.2006.05140.xopenalex-snapshot
The chromosome partitioning proteins Soj (ParA) and Spo0J (ParB) contribute to accurate chromosome partitioning, separation of replicated sister origins, and regulation of replication initiation in Bacillus subtilis
inferredcites →https://doi.org/10.1111/j.1365-2958.2006.05164.xopenalex-snapshot
Characterization of a conjugative transposon integrase, IntDOT
inferredcites →https://doi.org/10.1111/j.1365-2958.2006.05258.xopenalex-snapshot
Unique conjugation mechanism in mycelial streptomycetes: a DNA‐binding ATPase translocates unprocessed plasmid DNA at the hyphal tip
inferredcites →https://doi.org/10.1111/j.1365-2958.2006.05396.xopenalex-snapshot
Excision and transfer of the Mesorhizobium loti R7A symbiosis island requires an integrase IntS, a novel recombination directionality factor RdfS, and a putative relaxase RlxS
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Identification and characterization of the immunity repressor (ImmR) that controls the mobile genetic element ICEBs1 of Bacillus subtilis
inferredcites →https://doi.org/10.1111/j.1365-2958.2007.05756.xopenalex-snapshot
Unexpected effect of a Bacteroides conjugative transposon, CTnDOT, on chromosomal gene expression in its bacterial host
inferredcites →https://doi.org/10.1111/j.1365-2958.2007.06000.xopenalex-snapshot
Identification and characterization of int (integrase), xis (excisionase) and chromosomal attachment sites of the integrative and conjugative element ICEBs1 of Bacillus subtilis
inferredcites →https://doi.org/10.1111/j.1365-2958.2008.06414.xopenalex-snapshot
A conserved anti‐repressor controls horizontal gene transfer by proteolysis
inferredcites →https://doi.org/10.1111/j.1365-2958.2008.06579.xopenalex-snapshot
Atypical association of DDE transposition with conjugation specifies a new family of mobile elements
inferredcites →https://doi.org/10.1111/j.1365-2958.2009.06726.xopenalex-snapshot
Intracellular excision and reintegration dynamics of the ICE clc genomic island of Pseudomonas knackmussii sp. strain B13
inferredcites →https://doi.org/10.1111/j.1365-2958.2009.06843.xopenalex-snapshot
A LuxRI‐family regulatory system controls excision and transfer of the Mesorhizobium loti strain R7A symbiosis island by activating expression of two conserved hypothetical genes
inferredcites →https://doi.org/10.1111/j.1365-2958.2009.06985.xopenalex-snapshot
Autonomous plasmid‐like replication of a conjugative transposon
inferredcites →https://doi.org/10.1126/science.1088157openalex-snapshot
Toxins-Antitoxins: Plasmid Maintenance, Programmed Cell Death, and Cell Cycle Arrest
inferredcites →https://doi.org/10.1126/science.1137550openalex-snapshot
An H-NS-like Stealth Protein Aids Horizontal DNA Transmission in Bacteria
inferredcites →https://doi.org/10.1126/science.1153498openalex-snapshot
Direct Visualization of Horizontal Gene Transfer
inferredcites →https://doi.org/10.1128/aac.36.4.769openalex-snapshot
Characterization of the tet(M) determinant of Tn916: evidence for regulation by transcription attenuation
inferredcites →https://doi.org/10.1128/aac.42.8.1871openalex-snapshot
Tn 916 Family Conjugative Transposons and Dissemination of Antimicrobial Resistance Determinants
inferredcites →https://doi.org/10.1128/aac.45.11.2991-3000.2001openalex-snapshot
Molecular Analysis of Antibiotic Resistance Gene Clusters in Vibrio cholerae O139 and O1 SXT Constins
inferredcites →https://doi.org/10.1128/aac.46.5.1602-1603.2002openalex-snapshot
Site-Specific Recombination with the Chromosomal tRNA Leu Gene by the Large Conjugative Haemophilus Resistance Plasmid
inferredcites →https://doi.org/10.1128/aem.64.6.2126-2132.1998openalex-snapshot
Low-Frequency Horizontal Transfer of an Element Containing the Chlorocatechol Degradation Genes from Pseudomonas sp. Strain B13 to Pseudomonas putida F1 and to Indigenous Bacteria in Laboratory-Scale Activated-Sludge Microcosms
inferredcites →https://doi.org/10.1128/aem.72.1.404-411.2006openalex-snapshot
Expression of Transcription Activator ComK of Bacillus subtilis in the Heterologous Host Lactococcus lactis Leads to a Genome-Wide Repression Pattern: a Case Study of Horizontal Gene Transfer
inferredcites →https://doi.org/10.1128/jb.00109-08openalex-snapshot
Genomic and Functional Analysis of ICE Pda Spa1, a Fish-Pathogen-Derived SXT-Related Integrating Conjugative Element That Can Mobilize a Virulence Plasmid
inferredcites →https://doi.org/10.1128/jb.00150-08openalex-snapshot
Identification of the Origin of Transfer (oriT) and a New Gene Required for Mobilization of the SXT/R391 Family of Integrating Conjugative Elements
inferredcites →https://doi.org/10.1128/jb.00189-09openalex-snapshot
Comparative Genomics of the IncA/C Multidrug Resistance Plasmid Family
inferredcites →https://doi.org/10.1128/jb.00522-07openalex-snapshot
Determinants of Entry Exclusion within Eex and TraG Are Cytoplasmic
inferredcites →https://doi.org/10.1128/jb.00739-09openalex-snapshot
Tetracycline-Associated Transcriptional Regulation of Transfer Genes of the Bacteroides Conjugative Transposon CTnDOT
inferredcites →https://doi.org/10.1128/jb.00824-08openalex-snapshot
Integrative Conjugative Elements and Related Elements Are Major Contributors to the Genome Diversity ofStreptococcus agalactiae
inferredcites →https://doi.org/10.1128/jb.00860-09openalex-snapshot
Polar Positioning of a Conjugation Protein from the Integrative and Conjugative Element ICEBs1ofBacillus subtilis
inferredcites →https://doi.org/10.1128/jb.00932-07openalex-snapshot
Identification of the Origin of Transfer ( oriT ) and DNA Relaxase Required for Conjugation of the Integrative and Conjugative Element ICE Bs1 of Bacillus subtilis
inferredcites →https://doi.org/10.1128/jb.00958-07openalex-snapshot
Hypothetical Functions of Toxin-Antitoxin Systems
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Novel Type IV Secretion System Involved in Propagation of Genomic Islands
inferredcites →https://doi.org/10.1128/jb.01624-08openalex-snapshot
A Novel Integrative Conjugative Element Mediates Genetic Transfer from Group G Streptococcus to Other β-Hemolytic Streptococci
inferredcites →https://doi.org/10.1128/jb.01902-06openalex-snapshot
The SXT/R391 Family of Integrative Conjugative Elements Is Composed of Two Exclusion Groups
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Evidence for a chromosome-borne resistance transposon (Tn916) in Streptococcus faecalis that is capable of "conjugal" transfer in the absence of a conjugative plasmid
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Cloning and characterization of a Bacteroides conjugal tetracycline-erythromycin resistance element by using a shuttle cosmid vector
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The region of a Bacteroides conjugal chromosomal tetracycline resistance element which is responsible for production of plasmidlike forms from unlinked chromosomal DNA might also be involved in transfer of the element
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Conjugative transfer of Tn916 in Enterococcus faecalis: trans activation of homologous transposons
inferredcites →https://doi.org/10.1128/jb.174.1.166-172.1992openalex-snapshot
Insertion and excision of Bacteroides conjugative chromosomal elements
inferredcites →https://doi.org/10.1128/jb.175.17.5529-5538.1993openalex-snapshot
Transfer functions of the conjugative integrating element pSAM2 from Streptomyces ambofaciens: characterization of a kil-kor system associated with transfer
inferredcites →https://doi.org/10.1128/jb.177.22.6644-6651.1995openalex-snapshot
A functional origin of transfer (oriT) on the conjugative transposon Tn916
inferredcites →https://doi.org/10.1128/jb.177.8.1938-1946.1995openalex-snapshot
Tn916 target DNA sequences bind the C-terminal domain of integrase protein with different affinities that correlate with transposon insertion frequency
inferredcites →https://doi.org/10.1128/jb.178.14.4157-4165.1996openalex-snapshot
A new type of conjugative transposon encodes resistance to sulfamethoxazole, trimethoprim, and streptomycin in Vibrio cholerae O139
inferredcites →https://doi.org/10.1128/jb.179.4.1117-1125.1997openalex-snapshot
Specific DNA cleavage mediated by the integrase of conjugative transposon Tn916
inferredcites →https://doi.org/10.1128/jb.179.8.2567-2572.1997openalex-snapshot
DNA binding by the Xis protein of the conjugative transposon Tn916
inferredcites →https://doi.org/10.1128/jb.180.12.3056-3061.1998openalex-snapshot
Replicase, Excisionase, and Integrase Genes of the Streptomyces Element pSAM2 Constitute an Operon Positively Regulated by the pra Gene
inferredcites →https://doi.org/10.1128/jb.180.17.4360-4369.1998openalex-snapshot
Chromosomal Integration, Tandem Amplification, and Deamplification in Pseudomonas putida F1 of a 105-Kilobase Genetic Element Containing the Chlorocatechol Degradative Genes from Pseudomonas sp. Strain B13
inferredcites →https://doi.org/10.1128/jb.180.21.5505-5514.1998openalex-snapshot
Int-B13, an Unusual Site-Specific Recombinase of the Bacteriophage P4 Integrase Family, Is Responsible for Chromosomal Insertion of the 105-Kilobase clc Element of Pseudomonas sp. Strain B13
inferredcites →https://doi.org/10.1128/jb.182.14.4035-4043.2000openalex-snapshot
Integration and Excision of a Bacteroides Conjugative Transposon, CTnDOT
inferredcites →https://doi.org/10.1128/jb.182.23.6577-6583.2000openalex-snapshot
The Large Resolvase TndX Is Required and Sufficient for Integration and Excision of Derivatives of the Novel Conjugative Transposon Tn 5397
inferredcites →https://doi.org/10.1128/jb.182.5.1243-1250.2000openalex-snapshot
KorSA from the Streptomyces Integrative Element pSAM2 Is a Central Transcriptional Repressor: Target Genes and Binding Sites
inferredcites →https://doi.org/10.1128/jb.182.6.1541-1548.2000openalex-snapshot
TraG from RP4 and TraG and VirD4 from Ti Plasmids Confer Relaxosome Specificity to the Conjugal Transfer System of pTiC58
inferredcites →https://doi.org/10.1128/jb.182.7.2043-2047.2000openalex-snapshot
Mobilization of Plasmids and Chromosomal DNA Mediated by the SXT Element, a Constin Found in Vibrio cholerae O139
inferredcites →https://doi.org/10.1128/jb.183.4.1124-1132.2001openalex-snapshot
Formation of Chromosomal Tandem Arrays of the SXT Element and R391, Two Conjugative Chromosomally Integrating Elements That Share an Attachment Site
inferredcites →https://doi.org/10.1128/jb.184.11.3086-3095.2002openalex-snapshot
Comparative Sequence Analysis of the Symbiosis Island ofMesorhizobium lotiStrain R7A
inferredcites →https://doi.org/10.1128/jb.184.14.3839-3847.2002openalex-snapshot
Characterization of Genes Involved in Modulation of Conjugal Transfer of theBacteroidesConjugative Transposon CTnDOT
inferredcites →https://doi.org/10.1128/jb.184.15.4259-4269.2002openalex-snapshot
Genomic and Functional Analyses of SXT, an Integrating Antibiotic Resistance Gene Transfer Element Derived from Vibrio cholerae
inferredcites →https://doi.org/10.1128/jb.184.18.5158-5169.2002openalex-snapshot
R391: a Conjugative Integrating Mosaic Comprised of Phage, Plasmid, and Transposon Elements
inferredcites →https://doi.org/10.1128/jb.184.8.2088-2099.2002openalex-snapshot
Xis Protein Binding to the Left Arm Stimulates Excision of Conjugative Transposon Tn916
inferredcites →https://doi.org/10.1128/jb.185.15.4530-4538.2003openalex-snapshot
Unusual Integrase Gene Expression on the clc Genomic Island in Pseudomonas sp. Strain B13
inferredcites →https://doi.org/10.1128/jb.185.17.5045-5054.2003openalex-snapshot
Control of SXT Integration and Excision
inferredcites →https://doi.org/10.1128/jb.186.17.5945-5949.2004openalex-snapshot
Identification of Operators and Promoters That Control SXT Conjugative Transfer
inferredcites →https://doi.org/10.1128/jb.186.2.518-534.2004openalex-snapshot
Sequence Analysis of the Mobile Genome Island pKLC102 of Pseudomonas aeruginosa C
inferredcites →https://doi.org/10.1128/jb.186.23.8114-8122.2004openalex-snapshot
Transferable Antibiotic Resistance Elements in Haemophilus influenzae Share a Common Evolutionary Origin with a Diverse Family of Syntenic Genomic Islands
inferredcites →https://doi.org/10.1128/jb.186.9.2548-2557.2004openalex-snapshot
Regulation of a Bacteroides Operon That Controls Excision and Transfer of the Conjugative Transposon CTnDOT
inferredcites →https://doi.org/10.1128/jb.186.9.2636-2645.2004openalex-snapshot
Formation of SXT Tandem Arrays and SXT-R391 Hybrids
inferredcites →https://doi.org/10.1128/jb.187.16.5732-5741.2005openalex-snapshot
Regulation of Excision Genes of theBacteroidesConjugative Transposon CTnDOT
inferredcites →https://doi.org/10.1128/jb.187.8.2673-2680.2005openalex-snapshot
Translational Control of Tetracycline Resistance and Conjugation in the Bacteroides Conjugative Transposon CTnDOT
inferredcites →https://doi.org/10.1128/jb.188.5.1999-2013.2006openalex-snapshot
TheclcElement ofPseudomonassp. Strain B13, a Genomic Island with Various Catabolic Properties
inferredcites →https://doi.org/10.1128/jb.188.6.2207-2213.2006openalex-snapshot
The Integrase of the Conjugative Transposon Tn 916 Directs Strand- and Sequence-Specific Cleavage of the Origin of Conjugal Transfer, oriT , by the Endonuclease Orf20
inferredcites →https://doi.org/10.1128/mmbr.00038-08openalex-snapshot
Challenging a Paradigm: the Role of DNA Homology in Tyrosine Recombinase Reactions
inferredcites →https://doi.org/10.1128/mmbr.59.4.579-590.1995openalex-snapshot
Conjugative transposons: an unusual and diverse set of integrated gene transfer elements
inferredcites →https://doi.org/10.1146/annurev.bi.64.070195.001041openalex-snapshot
DNA PROCESSING REACTIONS IN BACTERIAL CONJUGATION
inferredcites →https://doi.org/10.1146/annurev.genet.39.073003.113656openalex-snapshot
Switches in Bacteriophage Lambda Development
inferredcites →https://doi.org/10.1146/annurev.micro.53.1.245openalex-snapshot
Integrating DNA: Transposases and Retroviral Integrases
inferredcites →https://doi.org/10.1146/annurev.micro.58.030603.123630openalex-snapshot
BIOGENESIS, ARCHITECTURE, AND FUNCTION OF BACTERIAL TYPE IV SECRETION SYSTEMS
inferredcites →https://doi.org/10.1186/gb-2007-8-11-r237openalex-snapshot
Sequence and functional analyses of Haemophilusspp. genomic islands
inferredcites →https://doi.org/10.1371/journal.pgen.1000437openalex-snapshot
Bacterial Toxin–Antitoxin Systems: More Than Selfish Entities?
inferredcites →https://doi.org/10.1371/journal.pgen.1000439openalex-snapshot
A Toxin–Antitoxin System Promotes the Maintenance of an Integrative Conjugative Element
inferredcites →https://doi.org/10.1371/journal.pgen.1000775openalex-snapshot
Mobile Antibiotic Resistance Encoding Elements Promote Their Own Diversity
inferredcites →https://doi.org/10.1371/journal.pgen.1000786openalex-snapshot
Comparative ICE Genomics: Insights into the Evolution of the SXT/R391 Family of ICEs

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Plasmids Dominate the Proliferation of Antibiotic Resistance Genes in Aerobic Biofilm Driven by Antibiotic Selection
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Transposable Elements: A Toolkit for Stress and Environmental Adaptation in Bacteria
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UV Stress‐Responsive Genes Associated with Enterobacterial Integrative Conjugative Elements of the ICE SXT/R391 Group
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Acquired Resistance from Gene Transfer
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CRISPR‐Cas, Horizontal Gene Transfer, and the Flexible (Pan) Genome
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Das bakterielle Mobilom
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The Lactococcus lactis KF 147 nonribosomal peptide synthetase/polyketide synthase system confers resistance to oxidative stress during growth on plant leaf tissue lysate
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The antibiotic resistance and pathogenicity of a multidrug‐resistant Elizabethkingia anophelis isolate
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Bacteriophages and Antimicrobial Resistance in Agricultural Products
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Cholera Outbreaks in India
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Determination of Antibiotic Resistance Gene Transfer
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Common Themes and Specific Features in the Genomes of Phytopathogenic and Plant-Beneficial Bacteria
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A Practical Guide for Comparative Genomics of Mobile Genetic Elements in Prokaryotic Genomes
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Genetic Mechanisms of Transfer of Drug Resistance
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Alternative Ways to Exchange DNA: Unconventional Conjugation Among Bacteria
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Horizontal Transfer of Cyclic di-GMP Associated Genes. Theoretical Underpinnings and Future Perspectives
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Gene Transfer
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Multidrug-Resistant Bacteria
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Plant Microbiome Engineering: Principles, Methods, and Current Trends
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Target Search Processes During Horizontal Gene Transfer in Bacteria
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Genetic Mechanisms of Transfer of Drug Resistance
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The Order Mycoplasmatales
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Quantitative and Theoretical Microbial Population Biology
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Urinary Tract Infections
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Of Trees and Bushes: Phylogenetic Networks as Tools to Detect, Visualize and Model Reticulate Evolution
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The Genus Bacteroides
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Urinary Tract Infections
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Conjugative Elements: Host Chromosome Function Modifiers
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Conjugation in Bacillus thuringiensis: Insights into the Plasmids Exchange Process
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Mobile Genetic Elements (MGEs) Carrying Catabolic Genes
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Conjugative Plasmids in Anthropogenic Soils
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Antimicrobial Resistance Traits and Resistance Mechanisms in Bacterial Pathogens
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New-Age Genomic Measures for Uncovering Plant-Microbiome Interactions: Tools, Pipelines and Guidance Map for Genomic Data Mining
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Evolution and the Role of SXT-Related Integrative Conjugative Elements in Multidrug-Resistant Vibrio cholerae
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Evolution and the Role of SXT-Related Integrative Conjugative Elements in Multidrug-Resistant Vibrio cholerae
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Genomic Islands in Klebsiella pneumoniae
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Genomic Islands in the Gut Microbiome: Current Knowledge and the Application in the Probiotics Field
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Deciphering host–pathogen interaction during Streptomyces spp. infestation of potato
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Molecular Insights into Antimicrobial Resistance Traits of Commensal Human Gut Microbiota
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Mating Assay: Plating Below a Cell Density Threshold is Required for Unbiased Estimation of Plasmid Conjugation Frequency of RP4 Transfer Between E. coli Strains
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Lactobacillus surface layer proteins: structure, function and applications
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Bioprospection of the bacterial β-myrcene-biotransforming trait in the rhizosphere
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Conjugal Transfer of Antibiotic Resistances in Lactobacillus spp.
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Analysis of Streptococcus agalactiae pan-genome for prevalence, diversity and functionality of integrative and conjugative or mobilizable elements integrated in the tRNALys CTT gene
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Intensive targeting of regulatory competence genes by transposable elements in streptococci
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Comparative genomics for non-O1/O139 Vibrio cholerae isolates recovered from the Yangtze River Estuary versus V. cholerae representative isolates from serogroup O1
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How hyperthermophiles adapt to change their lives: DNA exchange in extreme conditions
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An ICEBs1-like element may be associated with the extreme radiation and desiccation resistance of Bacillus pumilus SAFR-032 spores
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Breaking the ICE: an easy workflow for identifying and analyzing integrative and conjugative elements in bacterial genomes
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Unveiling the pan-genome of the SXT/R391 family of ICEs: molecular characterisation of new variable regions of SXT/R391-like ICEs detected in Pseudoalteromonas sp. and Vibrio scophthalmi
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The IncC and IncX1 resistance plasmids present in multi-drug resistant Escherichia coli strains isolated from poultry manure in Poland
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Distribution of pathogenicity island markers in commensal and uropathogenic Escherichia coli isolates
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Genetic and Functional Characterization of a Salicylate 1-monooxygenase Located on an Integrative and Conjugative Element (ICE) in Pseudomonas stutzeri AJR13
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Does the mobilome of Ralstonia solanacearum influence the evolution and virulence of this pathogen?
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Conjugation
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Conjugative Transposons and Integrative and Conjugative Elements
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Pathogenicity and Other Genomic Islands
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Symbiosis Islands
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Microbial Resistance and Superbugs
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Mechanisms of Horizontal Gene Transfer and DNA Recombination
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Genome Plasticity, Bacterial
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Mobile genetic elements and pathogenicity islands encoding bacterial toxins
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Conjugative Transposons and Integrative and Conjugative Elements ☆
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Symbiosis Islands ☆
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Microbial spoilage of pharmaceutical products
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Evaluation of horizontal gene transfer of catabolic genes and its application in bioremediation
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Mechanisms of horizontal gene transfer and DNA recombination
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Superbugs, silver bullets, and new battlefields
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Bacteriophages isolated from hospital wastewater and its role in controlling drug-resistant pathogens
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Symbiosis Islands
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Antibiotic Resistance
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Combination of virulence and antibiotic resistance: a successful bacterial strategy to survive under hostile environments
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Traditional medicine in the management of microbial infections as antimicrobials: Pros and cons
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Bacterial Genome Plasticity
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Multidrug resistant Vibrio cholerae O1 El Tor carrying classical ctxB allele involved in a cholera outbreak in South Western India
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Selection and characterization of potential probiotic bacteria for Litopenaeus stylirostris shrimp hatcheries in New Caledonia
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Long-term serial culture of Piscirickettsia salmonis leads to a genomic and transcriptomic reorganization affecting bacterial virulence
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Antibiotics: Pharmacokinetics, toxicity, resistance and multidrug efflux pumps
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Magnetic field enhances the resilience of anammox consortia to sulfadiazine stress: Insights into nitrogen metabolism compensation and antibiotic resistance gene attenuation
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Contribution of antibiotics to the fate of antibiotic resistance genes in anaerobic treatment processes of swine wastewater: A review
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Synthetic biology strategies for engineering probiotics and commensal bacteria for diagnostics and therapeutics
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Transposase-DNA Complex Structures Reveal Mechanisms for Conjugative Transposition of Antibiotic Resistance
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Promotion of plasmid maintenance by heterogeneous partitioning of microbial communities
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The effect of carbon-based copper nanocomposites on Microcystis aeruginosa and the movability of antibiotic resistance genes in urban water
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TAome analysis of type-II toxin-antitoxin system from Xenorhabdus nematophila
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Multi-chassis engineering for heterologous production of microbial natural products
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Genomic analysis of Elizabethkingia species from aquatic environments: Evidence for potential clinical transmission
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Endogenous and Foreign Nucleoid-Associated Proteins of Bacteria: Occurrence, Interactions and Effects on Mobile Genetic Elements and Host's Biology
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Conformational plasticity of SpyCas9 induced by AcrIIA4 and AcrIIA2: Insights from molecular dynamics simulation
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T4SEpp: A pipeline integrating protein language models to predict bacterial type IV secreted effectors
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Cell Differentiation to “Mating Bodies” Induced by an Integrating and Conjugative Element in Free-Living Bacteria
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Horizontal Gene Transfer: Linking Sex and Cell Fate
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Giant mobile elements: Agents of multivariate phenotypic evolution in fungi
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WITHDRAWN: Antibiotic resistance in Pseudomonas aeruginosa – mechanisms, epidemiology and evolution
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Antibiotic resistance in Pseudomonas aeruginosa – Mechanisms, epidemiology and evolution
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Negative effect of copper nanoparticles on the conjugation frequency of conjugative catabolic plasmids
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Methods for the genetic manipulation of marine bacteria
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Genomic Mutations Within the Host Microbiome: Adaptive Evolution or Purifying Selection
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Time-resolved spread of antibiotic resistance genes in highly polluted air
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Population-based variations of a core resistome revealed by urban sewage metagenome surveillance
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Mechanistic insights into stereoselective effects of S-naproxen and R-naproxen on conjugative transfer of antibiotic resistance genes
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The role of iron-based nanoparticles (Fe-NPs) on methanogenesis in anaerobic digestion (AD) performance
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Impact of engineered nanoparticles on the fate of antibiotic resistance genes in wastewater and receiving environments: A comprehensive review
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Combined applications of UV and chlorine on antibiotic resistance control: A critical review
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Effects of co-selection of antibiotic-resistance and metal-resistance genes on antibiotic-resistance potency of environmental bacteria and related ecological risk factors
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Case studies on genetically modified organisms (GMOs): Potential risk scenarios and associated health indicators
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Genomic analysis of ICEVchBan8: An atypical genetic element in Vibrio cholerae
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Quorum sensing inhibition and antibiofilm action of triterpenoids: An updated insight
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Yersinia ruckeri strain SC09 disrupts proinflammatory activation via Toll/IL-1 receptor-containing protein STIR-3
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Comparative analysis of the Hrp pathogenicity island of Rubus- and Spiraeoideae-infecting Erwinia amylovora strains identifies the IT region as a remnant of an integrative conjugative element
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Antimicrobial resistance: Molecular drivers and underlying mechanisms
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Identification and characterization of new members of the SXT/R391 family of integrative and conjugative elements (ICEs) in Proteus mirabilis
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ICEGpa1804, a novel integrative and conjugative element carrying eight resistance genes, identified in Glaesserella parasuis
inferred← citeshttps://doi.org/10.1016/j.ijantimicag.2023.106793openalex-snapshot
Integrative and conjugative elements in streptococci can act as vectors for plasmids and translocatable units integrated via IS1216E
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Safety assessment and functional properties of four enterococci strains isolated from regional Argentinean cheese
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Genome analysis of antimicrobial resistance, virulence, and plasmid presence in Turkish Salmonella serovar Infantis isolates
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Function and distribution of the conjugative plasmid pLM1686 in foodborne Listeria monocytogenes in China
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ICEVchInd5 is prevalent in epidemic Vibrio cholerae O1 El Tor strains isolated in India
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Stability of the cargo regions of the cfr-carrying, multiresistance plasmid pSP01 from Staphylococcus epidermidis
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Pathogenomics insights for understanding Pasteurella multocida adaptation
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The multilayered toxic effects of cadmium on earthworms are driven by both cadmium content and soil properties: The potential mediating role of microbiota
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Metagenomic insight into the horizontal transfer mechanism of fluoroquinolone antibiotic resistance genes mediated by mobile genetic element in microalgae-bacteria consortia
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Genetic characterization and potential molecular dissemination mechanism of tet(31) gene in Aeromonas caviae from an oxytetracycline wastewater treatment system
inferred← citeshttps://doi.org/10.1016/j.jes.2024.10.008openalex-snapshot
Distribution of antibiotic resistance genes on chromosomes, plasmids and phages in aerobic biofilm microbiota under antibiotic pressure
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Characterisation of a novel integrative and conjugative element ICESsD9 carrying erm(B) and tet(O) resistance determinants in Streptococcus suis, and the distribution of ICESsD9-like elements in clinical isolates
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ICESag08: A new composite integrative and conjugative element from Streptococcus agalactiae mediating resistance to chloramphenicol and macrolides
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Aerobic composting as an effective cow manure management strategy for reducing the dissemination of antibiotic resistance genes: An integrated meta-omics study
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Profiles of bacteria/phage-comediated ARGs in pig farm wastewater treatment plants in China: Association with mobile genetic elements, bacterial communities and environmental factors
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Short-term cold stress can reduce the abundance of antibiotic resistance genes in the cecum and feces in a pig model
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Cu and Zn exert a greater influence on antibiotic resistance and its transfer than doxycycline in agricultural soils
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Metagenomic analysis characterizes resistomes of an acidic, multimetal(loid)-enriched coal source mine drainage treatment system
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A novel bidirectional regulation mechanism of mancozeb on the dissemination of antibiotic resistance
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Selective enrichment of high-risk antibiotic resistance genes and priority pathogens in freshwater plastisphere: Unique role of biodegradable microplastics
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Differential size-dependent response patterns and antibiotic resistance development mechanism in anammox consortia
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Comprehensive evaluation of disinfectants on the horizontal transfer of antibiotic resistance genes mediated by SXT integrative conjugative elements
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Inhibiting Cr(VI)-mediated ARG dissemination in wastewater: Synthetic antioxidant-, extracellular polymeric substance-, and nuclease-producing microbiome targeting ROS, MGEs, and ARG-MRG co-occurrence
inferred← citeshttps://doi.org/10.1016/j.jia.2024.07.008openalex-snapshot
Emergence of a novel multi-resistance-mediating integrative and conjugative element ICEPmu3 in Pasteurella multocida
inferred← citeshttps://doi.org/10.1016/j.marpolbul.2015.10.062openalex-snapshot
Detection and characterization of integrative and conjugative elements (ICEs)-positive Vibrio cholerae isolates from aquacultured shrimp and the environment in Shanghai, China
inferred← citeshttps://doi.org/10.1016/j.meegid.2014.09.018openalex-snapshot
Generic determinants of Streptococcus colonization and infection
inferred← citeshttps://doi.org/10.1016/j.meegid.2021.105160openalex-snapshot
Differences in recipient ability of uropathogenic Escherichia coli strains in relation with their pathogenic potential
inferred← citeshttps://doi.org/10.1016/j.meegid.2025.105844openalex-snapshot
Genomic mechanisms underlying the adaptation of Anaerobutyricum species to the human host
inferred← citeshttps://doi.org/10.1016/j.mib.2011.07.027openalex-snapshot
Trends and barriers to lateral gene transfer in prokaryotes
inferred← citeshttps://doi.org/10.1016/j.mib.2016.03.014openalex-snapshot
Flexible genomic islands as drivers of genome evolution
inferred← citeshttps://doi.org/10.1016/j.mib.2017.03.014openalex-snapshot
Mechanisms of stabilization of integrative and conjugative elements
inferred← citeshttps://doi.org/10.1016/j.micpath.2017.09.009openalex-snapshot
Prevalence and genetic profiling of tetracycline resistance (Tet-R) genes and transposable element (Tn916) in environmental Enterococcus species
inferred← citeshttps://doi.org/10.1016/j.micpath.2017.12.052openalex-snapshot
Diversity of virulence genes in multidrug resistant Pseudomonas aeruginosa isolated from burn wound infections
inferred← citeshttps://doi.org/10.1016/j.micpath.2018.12.033openalex-snapshot
Co-carrying of KPC-2, NDM-5, CTX-M-3 and CTX-M-65 in three plasmids with serotype O89: H10 Escherichia coli strain belonging to the ST2 clone in China
inferred← citeshttps://doi.org/10.1016/j.micres.2014.06.007openalex-snapshot
Type IV secretion systems and genomic islands-mediated horizontal gene transfer in Pseudomonas and Haemophilus
inferred← citeshttps://doi.org/10.1016/j.micres.2020.126598openalex-snapshot
Spotlight on a novel bactericidal mechanism and a novel SXT/R391-like integrative and conjugative element, carrying multiple antibiotic resistance genes, in Pseudoalteromonas flavipulchra strain CDM8
inferred← citeshttps://doi.org/10.1016/j.microb.2025.100578openalex-snapshot
Biofilm, resistance, and quorum sensing: The triple threat in bacterial pathogenesis
inferred← citeshttps://doi.org/10.1016/j.mimet.2011.10.017openalex-snapshot
Rapid detection by multiplex PCR of Genomic Islands, prophages and Integrative Conjugative Elements in V. cholerae 7th pandemic variants
inferred← citeshttps://doi.org/10.1016/j.plasmid.2011.12.014openalex-snapshot
General requirements for protein secretion by the F-like conjugation system R1
inferred← citeshttps://doi.org/10.1016/j.plasmid.2013.05.008openalex-snapshot
Identification of another module involved in the horizontal transfer of the Haemophilus genomic island ICEHin1056
inferred← citeshttps://doi.org/10.1016/j.plasmid.2013.09.005openalex-snapshot
Conjugative type IV secretion systems in Gram-positive bacteria
inferred← citeshttps://doi.org/10.1016/j.plasmid.2014.06.004openalex-snapshot
H-NS-like nucleoid-associated proteins, mobile genetic elements and horizontal gene transfer in bacteria
inferred← citeshttps://doi.org/10.1016/j.plasmid.2014.11.003openalex-snapshot
Degenerate primer MOB typing of multiresistant clinical isolates of E. coli uncovers new plasmid backbones
inferred← citeshttps://doi.org/10.1016/j.plasmid.2015.01.001openalex-snapshot
Transfer of antibiotic-resistance genes via phage-related mobile elements
inferred← citeshttps://doi.org/10.1016/j.plasmid.2016.07.001openalex-snapshot
Biology of ICE Bs1 , an integrative and conjugative element in Bacillus subtilis
inferred← citeshttps://doi.org/10.1016/j.plasmid.2017.04.002openalex-snapshot
Regulation of conjugative transfer of plasmids and integrative conjugative elements
inferred← citeshttps://doi.org/10.1016/j.plasmid.2017.06.001openalex-snapshot
Evolutionary persistence of tripartite integrative and conjugative elements
inferred← citeshttps://doi.org/10.1016/j.plasmid.2019.102416openalex-snapshot
Delineation of the integrase-attachment and origin-of-transfer regions of the symbiosis island ICEMlSymR7A
inferred← citeshttps://doi.org/10.1016/j.plasmid.2021.102565openalex-snapshot
Genomic islands related to Salmonella genomic island 1; integrative mobilisable elements in trmE mobilised in trans by A/C plasmids
inferred← citeshttps://doi.org/10.1016/j.resmic.2014.12.005openalex-snapshot
Mobile genetic elements in Clostridium difficile and their role in genome function
inferred← citeshttps://doi.org/10.1016/j.resmic.2020.11.001openalex-snapshot
Evolution of gentamicin and arsenite resistance acquisition in Ralstonia pickettii water isolates
inferred← citeshttps://doi.org/10.1016/j.resmic.2023.104078openalex-snapshot
Prevalence of the optrA gene among Streptococcus suis isolates from diseased pigs and identification of a novel integrative conjugative element ICESsu988S
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2018.03.034openalex-snapshot
Distinct effects of struvite and biochar amendment on the class 1 integron antibiotic resistance gene cassettes in phyllosphere and rhizosphere
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2020.137275openalex-snapshot
Comparative genomics of vancomycin-resistant Enterococcus spp. revealed common resistome determinants from hospital wastewater to aquatic environments
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.151539openalex-snapshot
Unveiling the occurrence, hosts and mobility potential of antibiotic resistance genes in the deep ocean
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.152263openalex-snapshot
Metagenomic profiles of the resistome in subtropical estuaries: Co-occurrence patterns, indicative genes, and driving factors
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.164265openalex-snapshot
Metagenomic profiles of planktonic bacteria and resistome along a salinity gradient in the Pearl River Estuary, South China
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.168313openalex-snapshot
Microplastics shape microbial interactions and affect the dissemination of antibiotic resistance genes in different full-scale wastewater treatment plants
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2024.174594openalex-snapshot
Effect of meddling ARBs on ARGs dynamics in fungal infested soil and their selective dispersal along spatially distant mycelial networks
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2024.177461openalex-snapshot
Transmission and control strategies of antimicrobial resistance from the environment to the clinic: A holistic review
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2025.180595openalex-snapshot
Global epidemiology and genomic perspectives on vancomycin-resistant Enterococcus faecium: Rising antimicrobial resistance and transmission risks within the one health framework
inferred← citeshttps://doi.org/10.1016/j.soilbio.2018.04.009openalex-snapshot
Long-term effects of manure and chemical fertilizers on soil antibiotic resistome
inferred← citeshttps://doi.org/10.1016/j.syapm.2018.10.002openalex-snapshot
Prokaryotic species are sui generis evolutionary units
inferred← citeshttps://doi.org/10.1016/j.tibtech.2020.07.008openalex-snapshot
Microbiome Engineering: Synthetic Biology of Plant-Associated Microbiomes in Sustainable Agriculture
inferred← citeshttps://doi.org/10.1016/j.tig.2015.11.005openalex-snapshot
The Floating (Pathogenicity) Island: A Genomic Dessert
inferred← citeshttps://doi.org/10.1016/j.tim.2018.08.003openalex-snapshot
Pollutants That Replicate: Xenogenetic DNAs
inferred← citeshttps://doi.org/10.1016/j.tim.2020.05.011openalex-snapshot
The Role of Integrative and Conjugative Elements in Antibiotic Resistance Evolution
inferred← citeshttps://doi.org/10.1016/j.toxicon.2015.04.009openalex-snapshot
Production level of tetrodotoxin in Aeromonas is associated with the copy number of a plasmid
inferred← citeshttps://doi.org/10.1016/j.vaccine.2019.06.031openalex-snapshot
Antibiotic resistance in Vibrio cholerae: Understanding the ecology of resistance genes and mechanisms
inferred← citeshttps://doi.org/10.1016/j.vaccine.2019.06.034openalex-snapshot
CTX phage of Vibrio cholerae: Genomics and applications
inferred← citeshttps://doi.org/10.1016/j.vetmic.2015.04.013openalex-snapshot
Recombination between Streptococcus suis ICESsu32457 and Streptococcus agalactiae ICESa2603 yields a hybrid ICE transferable to Streptococcus pyogenes
inferred← citeshttps://doi.org/10.1016/j.vetmic.2018.05.002openalex-snapshot
ICEAplChn1, a novel SXT/R391 integrative conjugative element (ICE), carrying multiple antibiotic resistance genes in Actinobacillus pleuropneumoniae
inferred← citeshttps://doi.org/10.1016/j.vetmic.2018.11.028openalex-snapshot
A novel integrative conjugative element mediates transfer of multi-drug resistance between Streptococcus suis strains of different serotypes
inferred← citeshttps://doi.org/10.1016/j.vetmic.2019.108481openalex-snapshot
The Yersinia high-pathogenicity island (HPI) carried by a new integrative and conjugative element (ICE) in a multidrug-resistant and hypervirulent Klebsiella pneumoniae strain SCsl1
inferred← citeshttps://doi.org/10.1016/j.vetmic.2021.108983openalex-snapshot
Identification of mcr-1 and a novel chloramphenicol resistance gene catT on an integrative and conjugative element in an Actinobacillus strain of swine origin
inferred← citeshttps://doi.org/10.1016/j.vetmic.2024.110014openalex-snapshot
Molecular characterization of the integrative and conjugative elements harbouring multidrug resistance genes in Glaesserella parasuis
inferred← citeshttps://doi.org/10.1016/j.vetmic.2025.110409openalex-snapshot
Virulence determinants in Klebsiella pneumoniae associated with septicaemia outbreaks in neonatal pigs
inferred← citeshttps://doi.org/10.1016/j.watres.2020.116318openalex-snapshot
Deciphering the mobility and bacterial hosts of antibiotic resistance genes under antibiotic selection pressure by metagenomic assembly and binning approaches
inferred← citeshttps://doi.org/10.1016/j.watres.2023.120086openalex-snapshot
Per/polyfluoroalkyl substances modulate plasmid transfer of antibiotic resistance genes: A balance between oxidative stress and energy support
inferred← citeshttps://doi.org/10.1016/j.watres.2025.123589openalex-snapshot
Distribution patterns and ecological risks of antibiotic resistance genes in the Yap Trench
inferred← citeshttps://doi.org/10.1016/j.ympev.2018.03.034openalex-snapshot
Phylogenetic signature of lateral exchange of genes for antibiotic production and resistance among bacteria highlights a pattern of global transmission of pathogens between humans and livestock
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